RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MST1RQ04912 1400 aa22.24■■□□□ 1.15
SMC6-206ENST00000446852 VIRMAQ69YN4 1812 aaKnown RBP22.23■■□□□ 1.15
SMC6-206ENST00000446852 ARHGAP45Q92619 1136 aa22.23■■□□□ 1.15
SMC6-206ENST00000446852 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
SMC6-206ENST00000446852 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
SMC6-206ENST00000446852 KIAA0232Q92628 1395 aa22.23■■□□□ 1.15
SMC6-206ENST00000446852 RWDD1Q9H446 243 aaPredicted RBP22.22■■□□□ 1.15
SMC6-206ENST00000446852 ZBTB40Q9NUA8 1239 aa22.22■■□□□ 1.15
SMC6-206ENST00000446852 KRT28Q7Z3Y7 464 aa22.21■■□□□ 1.15
SMC6-206ENST00000446852 XIRP1Q702N8 1843 aaKnown RBP22.21■■□□□ 1.15
SMC6-206ENST00000446852 GCP02774 474 aa22.21■■□□□ 1.15
SMC6-206ENST00000446852 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
SMC6-206ENST00000446852 MSH6P52701 1360 aa22.21■■□□□ 1.15
SMC6-206ENST00000446852 DCCP43146 1447 aa22.21■■□□□ 1.15
SMC6-206ENST00000446852 ZBTB7CA1YPR0 619 aa22.2■■□□□ 1.14
SMC6-206ENST00000446852 USP19O94966 1318 aa22.2■■□□□ 1.14
SMC6-206ENST00000446852 ANP32AP39687 249 aaKnown RBP22.2■■□□□ 1.14
SMC6-206ENST00000446852 ABCC4O15439 1325 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 PLEKHG5O94827 1062 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 C8orf34Q49A92 452 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 LMOD2Q6P5Q4 547 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 RGPD5Q99666 1765 aa22.19■■□□□ 1.14
SMC6-206ENST00000446852 STRCQ7RTU9 1775 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 ATF3P18847 181 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 GNAT3A8MTJ3 354 aa22.18■■□□□ 1.14
SMC6-206ENST00000446852 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
SMC6-206ENST00000446852 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
SMC6-206ENST00000446852 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
SMC6-206ENST00000446852 TSPYL4Q9UJ04 414 aa22.17■■□□□ 1.14
SMC6-206ENST00000446852 PDZRN3Q9UPQ7 1066 aa22.17■■□□□ 1.14
SMC6-206ENST00000446852 MED1Q15648 1581 aaPredicted RBP22.17■■□□□ 1.14
SMC6-206ENST00000446852 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
SMC6-206ENST00000446852 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
SMC6-206ENST00000446852 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
SMC6-206ENST00000446852 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
SMC6-206ENST00000446852 RGS12O14924 1447 aa22.14■■□□□ 1.14
SMC6-206ENST00000446852 HAP1P54257 671 aaPredicted RBP22.14■■□□□ 1.13
SMC6-206ENST00000446852 IL17REQ8NFR9 667 aa22.14■■□□□ 1.13
SMC6-206ENST00000446852 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
SMC6-206ENST00000446852 DDX17Q92841 729 aaKnown RBP22.14■■□□□ 1.13
SMC6-206ENST00000446852 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.13
SMC6-206ENST00000446852 KDM4FA0A1W2PPD8 638 aa22.13■■□□□ 1.13
SMC6-206ENST00000446852 IPO9Q96P70 1041 aaKnown RBP22.13■■□□□ 1.13
SMC6-206ENST00000446852 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
SMC6-206ENST00000446852 LMO7Q8WWI1 1683 aa22.12■■□□□ 1.13
SMC6-206ENST00000446852 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
SMC6-206ENST00000446852 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
SMC6-206ENST00000446852 AXIN2Q9Y2T1 843 aa22.1■■□□□ 1.13
SMC6-206ENST00000446852 SMC5Q8IY18 1101 aa22.09■■□□□ 1.13
SMC6-206ENST00000446852 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
SMC6-206ENST00000446852 CRYBG1Q9Y4K1 1723 aa22.08■■□□□ 1.13
SMC6-206ENST00000446852 C1orf115Q9H7X2 142 aa22.08■■□□□ 1.13
SMC6-206ENST00000446852 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
SMC6-206ENST00000446852 PXDNQ92626 1479 aa22.07■■□□□ 1.12
SMC6-206ENST00000446852 CHMP4BQ9H444 224 aaKnown RBP22.07■■□□□ 1.12
SMC6-206ENST00000446852 ANP32EQ9BTT0 268 aa22.06■■□□□ 1.12
SMC6-206ENST00000446852 CACNA1FO60840 1977 aa22.06■■□□□ 1.12
SMC6-206ENST00000446852 PTPRCP08575 1304 aa22.06■■□□□ 1.12
SMC6-206ENST00000446852 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
SMC6-206ENST00000446852 KDM3BQ7LBC6 1761 aa22.06■■□□□ 1.12
SMC6-206ENST00000446852 COL18A1P39060 1754 aa22.05■■□□□ 1.12
SMC6-206ENST00000446852 ZC3H6P61129 1189 aaKnown RBP22.05■■□□□ 1.12
SMC6-206ENST00000446852 TAF7Q15545 349 aaPredicted RBP22.05■■□□□ 1.12
SMC6-206ENST00000446852 INTS3Q68E01 1043 aaKnown RBP22.05■■□□□ 1.12
SMC6-206ENST00000446852 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
SMC6-206ENST00000446852 NPHP3Q7Z494 1330 aa22.05■■□□□ 1.12
SMC6-206ENST00000446852 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
SMC6-206ENST00000446852 BABAM1Q9NWV8 329 aa22.03■■□□□ 1.12
SMC6-206ENST00000446852 G2E3Q7L622 706 aa22.03■■□□□ 1.12
SMC6-206ENST00000446852 LGR6Q9HBX8 967 aa22.03■■□□□ 1.12
SMC6-206ENST00000446852 ERBB3P21860 1342 aa22.02■■□□□ 1.12
SMC6-206ENST00000446852 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
SMC6-206ENST00000446852 ZNF530Q6P9A1 599 aaPredicted RBP22.02■■□□□ 1.12
SMC6-206ENST00000446852 ERICH6Q7L0X2 663 aa22.02■■□□□ 1.12
SMC6-206ENST00000446852 PLEKHO1Q53GL0 409 aaPredicted RBP22■■□□□ 1.11
SMC6-206ENST00000446852 NUCB1Q02818 461 aa22■■□□□ 1.11
SMC6-206ENST00000446852 AKAP4Q5JQC9 854 aa22■■□□□ 1.11
SMC6-206ENST00000446852 CABLES1Q8TDN4 633 aa22■■□□□ 1.11
SMC6-206ENST00000446852 ZNF335Q9H4Z2 1342 aaPredicted RBP21.99■■□□□ 1.11
SMC6-206ENST00000446852 AMOTQ4VCS5 1084 aa21.99■■□□□ 1.11
SMC6-206ENST00000446852 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
SMC6-206ENST00000446852 SPATA31A3Q5VYP0 1347 aa21.98■■□□□ 1.11
SMC6-206ENST00000446852 SIPA1L3O60292 1781 aaPredicted RBP21.98■■□□□ 1.11
SMC6-206ENST00000446852 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
SMC6-206ENST00000446852 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
SMC6-206ENST00000446852 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 SEC24BO95487 1268 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 SOS1Q07889 1333 aaPredicted RBP21.97■■□□□ 1.11
SMC6-206ENST00000446852 CCDC30Q5VVM6 783 aa21.97■■□□□ 1.11
SMC6-206ENST00000446852 ADAMTS7Q9UKP4 1686 aa21.96■■□□□ 1.11
SMC6-206ENST00000446852 F6X3S4 739 aa21.96■■□□□ 1.11
SMC6-206ENST00000446852 CHD1LQ86WJ1 897 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms