RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TRDNQ13061 729 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 NEUROD6Q96NK8 337 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 PTPRTO14522 1441 aa19.92■□□□□ 0.78
TCOF1-206ENST00000445265 F6X3S4 739 aa19.91■□□□□ 0.78
TCOF1-206ENST00000445265 HMGN5P82970 282 aaKnown RBP19.91■□□□□ 0.78
TCOF1-206ENST00000445265 SBNO2Q9Y2G9 1366 aa19.91■□□□□ 0.78
TCOF1-206ENST00000445265 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
TCOF1-206ENST00000445265 VAMP4O75379 141 aa19.91■□□□□ 0.78
TCOF1-206ENST00000445265 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
TCOF1-206ENST00000445265 MAP4K4O95819 1239 aaPredicted RBP19.91■□□□□ 0.78
TCOF1-206ENST00000445265 SYNE3Q6ZMZ3 975 aa19.91■□□□□ 0.78
TCOF1-206ENST00000445265 KLHL40Q2TBA0 621 aa19.9■□□□□ 0.78
TCOF1-206ENST00000445265 ANKRD44Q8N8A2 993 aa19.9■□□□□ 0.78
TCOF1-206ENST00000445265 FBLN1P23142 703 aa19.9■□□□□ 0.78
TCOF1-206ENST00000445265 KRT85P78386 507 aa19.9■□□□□ 0.78
TCOF1-206ENST00000445265 TRIM29Q14134 588 aa19.9■□□□□ 0.78
TCOF1-206ENST00000445265 TRMT2AQ8IZ69 625 aaKnown RBP19.89■□□□□ 0.78
TCOF1-206ENST00000445265 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.77
TCOF1-206ENST00000445265 GLRX3O76003 335 aaKnown RBP19.89■□□□□ 0.77
TCOF1-206ENST00000445265 CCDC192P0DO97 292 aa19.89■□□□□ 0.77
TCOF1-206ENST00000445265 CWC27Q6UX04 472 aaKnown RBP19.89■□□□□ 0.77
TCOF1-206ENST00000445265 UPF3BQ9BZI7 483 aaKnown RBP19.89■□□□□ 0.77
TCOF1-206ENST00000445265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
TCOF1-206ENST00000445265 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 SYCE3A1L190 88 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 FLIIQ13045 1269 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 NUTM1Q86Y26 1132 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 ZNF592Q92610 1267 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 PDRG1Q9NUG6 133 aa19.88■□□□□ 0.77
TCOF1-206ENST00000445265 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
TCOF1-206ENST00000445265 LARP1BQ659C4 914 aaKnown RBP19.87■□□□□ 0.77
TCOF1-206ENST00000445265 RALYLQ86SE5 291 aaKnown RBP19.87■□□□□ 0.77
TCOF1-206ENST00000445265 AACSQ86V21 672 aa19.87■□□□□ 0.77
TCOF1-206ENST00000445265 JAKMIP1Q96N16 626 aaKnown RBP19.87■□□□□ 0.77
TCOF1-206ENST00000445265 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
TCOF1-206ENST00000445265 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
TCOF1-206ENST00000445265 BLOC1S2Q6QNY1 142 aa19.87■□□□□ 0.77
TCOF1-206ENST00000445265 KDM5AP29375 1690 aaKnown RBP19.87■□□□□ 0.77
TCOF1-206ENST00000445265 TRIM5Q9C035 493 aa19.86■□□□□ 0.77
TCOF1-206ENST00000445265 NAT10Q9H0A0 1025 aaKnown RBP19.86■□□□□ 0.77
TCOF1-206ENST00000445265 APPP05067 770 aa19.86■□□□□ 0.77
TCOF1-206ENST00000445265 LRRFIP2Q9Y608 721 aaKnown RBP19.86■□□□□ 0.77
TCOF1-206ENST00000445265 PRDM15P57071 1507 aaPredicted RBP19.85■□□□□ 0.77
TCOF1-206ENST00000445265 SDSP20132 328 aa19.85■□□□□ 0.77
TCOF1-206ENST00000445265 DNAJC2Q99543 621 aaKnown RBP19.85■□□□□ 0.77
TCOF1-206ENST00000445265 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
TCOF1-206ENST00000445265 ATP10AO60312 1499 aa19.85■□□□□ 0.77
TCOF1-206ENST00000445265 DCTPP1Q9H773 170 aa19.85■□□□□ 0.77
TCOF1-206ENST00000445265 SYNMO15061 1565 aa19.85■□□□□ 0.77
TCOF1-206ENST00000445265 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
TCOF1-206ENST00000445265 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
TCOF1-206ENST00000445265 MYO5CQ9NQX4 1742 aa19.84■□□□□ 0.77
TCOF1-206ENST00000445265 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
TCOF1-206ENST00000445265 KINO60870 393 aaKnown RBP19.83■□□□□ 0.77
TCOF1-206ENST00000445265 WASHC4Q2M389 1173 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 MEIS3Q99687 375 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 ACEP12821 1306 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
TCOF1-206ENST00000445265 FOSBP53539 338 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 EVA1CP58658 441 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
TCOF1-206ENST00000445265 POGZQ7Z3K3 1410 aa19.83■□□□□ 0.76
TCOF1-206ENST00000445265 RRP9O43818 475 aaKnown RBP19.83■□□□□ 0.76
TCOF1-206ENST00000445265 ATF3P18847 181 aa19.83■□□□□ 0.76
TCOF1-206ENST00000445265 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.76
TCOF1-206ENST00000445265 HOOK1Q9UJC3 728 aaKnown RBP19.83■□□□□ 0.76
TCOF1-206ENST00000445265 CASTP20810 708 aaKnown RBP19.83■□□□□ 0.76
TCOF1-206ENST00000445265 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.76
TCOF1-206ENST00000445265 ABCC1P33527 1531 aa19.83■□□□□ 0.76
TCOF1-206ENST00000445265 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
TCOF1-206ENST00000445265 PHACTR3Q96KR7 559 aa19.82■□□□□ 0.76
TCOF1-206ENST00000445265 SIL1Q9H173 461 aa19.82■□□□□ 0.76
TCOF1-206ENST00000445265 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
TCOF1-206ENST00000445265 KRT32Q14532 448 aa19.82■□□□□ 0.76
TCOF1-206ENST00000445265 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
TCOF1-206ENST00000445265 RAB3GAP1Q15042 981 aa19.82■□□□□ 0.76
TCOF1-206ENST00000445265 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
TCOF1-206ENST00000445265 ZNF396Q96N95 335 aaPredicted RBP19.81■□□□□ 0.76
TCOF1-206ENST00000445265 PLA2R1Q13018 1463 aa19.81■□□□□ 0.76
TCOF1-206ENST00000445265 RASSF8Q8NHQ8 419 aa19.81■□□□□ 0.76
TCOF1-206ENST00000445265 TNMDQ9H2S6 317 aa19.81■□□□□ 0.76
TCOF1-206ENST00000445265 DNAAF4Q8WXU2 420 aa19.81■□□□□ 0.76
TCOF1-206ENST00000445265 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
TCOF1-206ENST00000445265 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
TCOF1-206ENST00000445265 SH2B1Q9NRF2 756 aaPredicted RBP19.8■□□□□ 0.76
TCOF1-206ENST00000445265 NPATQ14207 1427 aa19.8■□□□□ 0.76
TCOF1-206ENST00000445265 PDE1AP54750 535 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 TRPM2O94759 1503 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 NFXL1Q6ZNB6 911 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 ADCY10Q96PN6 1610 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.79■□□□□ 0.76
TCOF1-206ENST00000445265 DHX16O60231 1041 aaKnown RBP19.79■□□□□ 0.76
TCOF1-206ENST00000445265 CLCN1P35523 988 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 HSP90AB2PQ58FF8 381 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
TCOF1-206ENST00000445265 CCDC183Q5T5S1 534 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms