RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.45
SEMA3D-202ENST00000444867 MCM10Q7L590 875 aa24.07■■□□□ 1.44
SEMA3D-202ENST00000444867 TSPYL6Q8N831 410 aa24.07■■□□□ 1.44
SEMA3D-202ENST00000444867 GCP02774 474 aa24.06■■□□□ 1.44
SEMA3D-202ENST00000444867 IGHDP01880 384 aa24.06■■□□□ 1.44
SEMA3D-202ENST00000444867 ARHGEF25Q86VW2 580 aa24.06■■□□□ 1.44
SEMA3D-202ENST00000444867 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
SEMA3D-202ENST00000444867 MSH6P52701 1360 aa24.05■■□□□ 1.44
SEMA3D-202ENST00000444867 LTV1Q96GA3 475 aaPredicted RBP24.04■■□□□ 1.44
SEMA3D-202ENST00000444867 CAMTA1Q9Y6Y1 1673 aa24.04■■□□□ 1.44
SEMA3D-202ENST00000444867 RGPD2P0DJD1 1756 aa24.04■■□□□ 1.44
SEMA3D-202ENST00000444867 LTBP4Q8N2S1 1624 aa24.03■■□□□ 1.44
SEMA3D-202ENST00000444867 XPCQ01831 940 aaPredicted RBP24.03■■□□□ 1.44
SEMA3D-202ENST00000444867 GNAT3A8MTJ3 354 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 ITPRIPQ8IWB1 547 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 CHMP4BQ9H444 224 aaKnown RBP24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 RWDD1Q9H446 243 aaPredicted RBP24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 PCDHB15Q9Y5E8 787 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 NCAPD2Q15021 1401 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 PDE4AP27815 886 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 TMEM57Q8N5G2 664 aa24.02■■□□□ 1.44
SEMA3D-202ENST00000444867 NPHP3Q7Z494 1330 aa24■■□□□ 1.43
SEMA3D-202ENST00000444867 ELL2O00472 640 aaPredicted RBP24■■□□□ 1.43
SEMA3D-202ENST00000444867 BACH2Q9BYV9 841 aa24■■□□□ 1.43
SEMA3D-202ENST00000444867 BABAM1Q9NWV8 329 aa24■■□□□ 1.43
SEMA3D-202ENST00000444867 MED1Q15648 1581 aaPredicted RBP24■■□□□ 1.43
SEMA3D-202ENST00000444867 LMOD2Q6P5Q4 547 aa23.99■■□□□ 1.43
SEMA3D-202ENST00000444867 API5Q9BZZ5 524 aaKnown RBP23.99■■□□□ 1.43
SEMA3D-202ENST00000444867 LMO7Q8WWI1 1683 aa23.98■■□□□ 1.43
SEMA3D-202ENST00000444867 NBPF6Q5VWK0 638 aa23.98■■□□□ 1.43
SEMA3D-202ENST00000444867 NBPF4Q96M43 638 aa23.98■■□□□ 1.43
SEMA3D-202ENST00000444867 ABCC4O15439 1325 aa23.97■■□□□ 1.43
SEMA3D-202ENST00000444867 TSPYL4Q9UJ04 414 aa23.97■■□□□ 1.43
SEMA3D-202ENST00000444867 ABCC6O95255 1503 aa23.97■■□□□ 1.43
SEMA3D-202ENST00000444867 ZBTB40Q9NUA8 1239 aa23.96■■□□□ 1.43
SEMA3D-202ENST00000444867 SOS1Q07889 1333 aaPredicted RBP23.96■■□□□ 1.43
SEMA3D-202ENST00000444867 PXDNQ92626 1479 aa23.96■■□□□ 1.43
SEMA3D-202ENST00000444867 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.43
SEMA3D-202ENST00000444867 HDAC1Q13547 482 aaPredicted RBP23.95■■□□□ 1.43
SEMA3D-202ENST00000444867 TNS3Q68CZ2 1445 aa23.95■■□□□ 1.43
SEMA3D-202ENST00000444867 RGPD5Q99666 1765 aa23.95■■□□□ 1.43
SEMA3D-202ENST00000444867 CRYBG1Q9Y4K1 1723 aa23.95■■□□□ 1.42
SEMA3D-202ENST00000444867 SKAP1Q86WV1 359 aa23.95■■□□□ 1.42
SEMA3D-202ENST00000444867 USHBP1Q8N6Y0 703 aa23.95■■□□□ 1.42
SEMA3D-202ENST00000444867 CACNA1FO60840 1977 aa23.93■■□□□ 1.42
SEMA3D-202ENST00000444867 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
SEMA3D-202ENST00000444867 VIRMAQ69YN4 1812 aaKnown RBP23.92■■□□□ 1.42
SEMA3D-202ENST00000444867 FAM208AQ9UK61 1670 aaKnown RBP23.92■■□□□ 1.42
SEMA3D-202ENST00000444867 AMOTQ4VCS5 1084 aa23.92■■□□□ 1.42
SEMA3D-202ENST00000444867 COL18A1P39060 1754 aa23.91■■□□□ 1.42
SEMA3D-202ENST00000444867 PTPRCP08575 1304 aa23.91■■□□□ 1.42
SEMA3D-202ENST00000444867 CEMIPQ8WUJ3 1361 aa23.91■■□□□ 1.42
SEMA3D-202ENST00000444867 PLEKHO1Q53GL0 409 aaPredicted RBP23.91■■□□□ 1.42
SEMA3D-202ENST00000444867 IL17REQ8NFR9 667 aa23.91■■□□□ 1.42
SEMA3D-202ENST00000444867 RGS3P49796 1198 aa23.9■■□□□ 1.42
SEMA3D-202ENST00000444867 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
SEMA3D-202ENST00000444867 KRT24Q2M2I5 525 aa23.89■■□□□ 1.42
SEMA3D-202ENST00000444867 FAM161AQ3B820 660 aa23.89■■□□□ 1.42
SEMA3D-202ENST00000444867 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.41
SEMA3D-202ENST00000444867 ZBTB7BO15156 539 aaPredicted RBP23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 ANP32AP39687 249 aaKnown RBP23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 AKAP4Q5JQC9 854 aa23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 MIS18AQ9NYP9 233 aa23.88■■□□□ 1.41
SEMA3D-202ENST00000444867 KDM3BQ7LBC6 1761 aa23.87■■□□□ 1.41
SEMA3D-202ENST00000444867 PDZRN3Q9UPQ7 1066 aa23.86■■□□□ 1.41
SEMA3D-202ENST00000444867 ERBB3P21860 1342 aa23.86■■□□□ 1.41
SEMA3D-202ENST00000444867 PLEKHG2Q9H7P9 1386 aa23.86■■□□□ 1.41
SEMA3D-202ENST00000444867 RGS12O14924 1447 aa23.85■■□□□ 1.41
SEMA3D-202ENST00000444867 INTS3Q68E01 1043 aaKnown RBP23.85■■□□□ 1.41
SEMA3D-202ENST00000444867 AXIN2Q9Y2T1 843 aa23.85■■□□□ 1.41
SEMA3D-202ENST00000444867 BRINP3Q76B58 766 aa23.84■■□□□ 1.41
SEMA3D-202ENST00000444867 SMC5Q8IY18 1101 aa23.84■■□□□ 1.41
SEMA3D-202ENST00000444867 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
SEMA3D-202ENST00000444867 CPDO75976 1380 aa23.83■■□□□ 1.41
SEMA3D-202ENST00000444867 ZC3H6P61129 1189 aaKnown RBP23.83■■□□□ 1.41
SEMA3D-202ENST00000444867 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
SEMA3D-202ENST00000444867 ADAMTS7Q9UKP4 1686 aa23.82■■□□□ 1.4
SEMA3D-202ENST00000444867 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
SEMA3D-202ENST00000444867 SLC4A2P04920 1241 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 C8orf34Q49A92 452 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 CCDC30Q5VVM6 783 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 STK31Q9BXU1 1019 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 CHMP4AQ9BY43 222 aa23.81■■□□□ 1.4
SEMA3D-202ENST00000444867 SLAIN2Q9P270 581 aa23.79■■□□□ 1.4
SEMA3D-202ENST00000444867 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
SEMA3D-202ENST00000444867 N4BP2Q86UW6 1770 aaPredicted RBP23.79■■□□□ 1.4
SEMA3D-202ENST00000444867 SOS2Q07890 1332 aaPredicted RBP23.78■■□□□ 1.4
SEMA3D-202ENST00000444867 MSH5O43196 834 aa23.77■■□□□ 1.4
SEMA3D-202ENST00000444867 HOXB7P09629 217 aa23.77■■□□□ 1.4
SEMA3D-202ENST00000444867 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
SEMA3D-202ENST00000444867 TEFQ10587 303 aa23.77■■□□□ 1.4
SEMA3D-202ENST00000444867 GCC1Q96CN9 775 aa23.76■■□□□ 1.39
SEMA3D-202ENST00000444867 IPO9Q96P70 1041 aaKnown RBP23.76■■□□□ 1.39
SEMA3D-202ENST00000444867 LGR6Q9HBX8 967 aa23.76■■□□□ 1.39
SEMA3D-202ENST00000444867 RNMTO43148 476 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms