RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 ZBTB7AO95365 584 aa32.74■■■□□ 2.83
TMEM238-201ENST00000444469 TATP17735 454 aaPredicted RBP32.74■■■□□ 2.83
TMEM238-201ENST00000444469 EIF4G2P78344 907 aaKnown RBP eCLIP32.74■■■□□ 2.837e-7■■■■■ 28.2
TMEM238-201ENST00000444469 USHBP1Q8N6Y0 703 aa32.74■■■□□ 2.83
TMEM238-201ENST00000444469 HSP90AB2PQ58FF8 381 aa32.73■■■□□ 2.83
TMEM238-201ENST00000444469 RGPD2P0DJD1 1756 aa32.73■■■□□ 2.83
TMEM238-201ENST00000444469 CASZ1Q86V15 1759 aa32.73■■■□□ 2.83
TMEM238-201ENST00000444469 MEGF6O75095 1541 aa32.72■■■□□ 2.83
TMEM238-201ENST00000444469 PPM1GO15355 546 aaPredicted RBP32.71■■■□□ 2.83
TMEM238-201ENST00000444469 PRIM1P49642 420 aaKnown RBP32.7■■■□□ 2.83
TMEM238-201ENST00000444469 SLC27A3Q5K4L6 730 aa32.69■■■□□ 2.82
TMEM238-201ENST00000444469 PDGFDQ9GZP0 370 aaPredicted RBP32.69■■■□□ 2.82
TMEM238-201ENST00000444469 ATF5Q9Y2D1 282 aaPredicted RBP32.68■■■□□ 2.82
TMEM238-201ENST00000444469 DOT1LQ8TEK3 1739 aa32.66■■■□□ 2.82
TMEM238-201ENST00000444469 MTFR1LQ9H019 292 aa32.66■■■□□ 2.82
TMEM238-201ENST00000444469 EMILIN1Q9Y6C2 1016 aa32.66■■■□□ 2.82
TMEM238-201ENST00000444469 PCDH11XQ9BZA7 1347 aa32.64■■■□□ 2.82
TMEM238-201ENST00000444469 PCDH11YQ9BZA8 1340 aa32.64■■■□□ 2.82
TMEM238-201ENST00000444469 HSPA5P11021 654 aaKnown RBP32.63■■■□□ 2.81
TMEM238-201ENST00000444469 LRRC4BQ9NT99 713 aa32.62■■■□□ 2.81
TMEM238-201ENST00000444469 PAPPAQ13219 1627 aa32.61■■■□□ 2.81
TMEM238-201ENST00000444469 SHANK3Q9BYB0 1731 aa32.6■■■□□ 2.81
TMEM238-201ENST00000444469 ZNF827Q17R98 1081 aa32.59■■■□□ 2.81
TMEM238-201ENST00000444469 PTGER2P43116 358 aa32.57■■■□□ 2.8
TMEM238-201ENST00000444469 TFCP2L1Q9NZI6 479 aa32.56■■■□□ 2.8
TMEM238-201ENST00000444469 CCNL1Q9UK58 526 aaPredicted RBP32.56■■■□□ 2.8
TMEM238-201ENST00000444469 WASHC2AQ641Q2 1341 aa32.55■■■□□ 2.8
TMEM238-201ENST00000444469 TNNT2P45379 298 aaPredicted RBP32.55■■■□□ 2.8
TMEM238-201ENST00000444469 NSD2O96028 1365 aa32.55■■■□□ 2.8
TMEM238-201ENST00000444469 HMGB2P26583 209 aaKnown RBP32.53■■■□□ 2.8
TMEM238-201ENST00000444469 AKT1S1Q96B36 256 aa32.53■■■□□ 2.8
TMEM238-201ENST00000444469 SPG7Q9UQ90 795 aa32.53■■■□□ 2.8
TMEM238-201ENST00000444469 KCNQ4P56696 695 aa32.51■■■□□ 2.79
TMEM238-201ENST00000444469 SLC16A10Q8TF71 515 aa32.51■■■□□ 2.79
TMEM238-201ENST00000444469 PANK3Q9H999 370 aa32.51■■■□□ 2.79
TMEM238-201ENST00000444469 POLKQ9UBT6 870 aa32.51■■■□□ 2.79
TMEM238-201ENST00000444469 ANKRD26Q9UPS8 1709 aa32.51■■■□□ 2.79
TMEM238-201ENST00000444469 ARXQ96QS3 562 aa32.5■■■□□ 2.79
TMEM238-201ENST00000444469 MPRIPQ6WCQ1 1025 aa32.49■■■□□ 2.79
TMEM238-201ENST00000444469 MAP2P11137 1827 aaKnown RBP32.49■■■□□ 2.79
TMEM238-201ENST00000444469 YY1P25490 414 aa32.48■■■□□ 2.79
TMEM238-201ENST00000444469 POLD1P28340 1107 aa32.48■■■□□ 2.79
TMEM238-201ENST00000444469 FHDC1Q9C0D6 1143 aaPredicted RBP32.48■■■□□ 2.79
TMEM238-201ENST00000444469 LY75O60449 1722 aa32.48■■■□□ 2.79
TMEM238-201ENST00000444469 EYA1Q99502 592 aa32.47■■■□□ 2.79
TMEM238-201ENST00000444469 CYP27B1O15528 508 aa32.46■■■□□ 2.79
TMEM238-201ENST00000444469 MSH5O43196 834 aa32.46■■■□□ 2.79
TMEM238-201ENST00000444469 PNPLA7Q6ZV29 1317 aa32.45■■■□□ 2.78
TMEM238-201ENST00000444469 SGIP1Q9BQI5 828 aa32.44■■■□□ 2.78
TMEM238-201ENST00000444469 SYT17Q9BSW7 474 aa32.44■■■□□ 2.78
TMEM238-201ENST00000444469 NCAPD2Q15021 1401 aa32.43■■■□□ 2.78
TMEM238-201ENST00000444469 QSER1Q2KHR3 1735 aa32.43■■■□□ 2.78
TMEM238-201ENST00000444469 PKD1L3Q7Z443 1732 aa32.43■■■□□ 2.78
TMEM238-201ENST00000444469 SMARCC1Q92922 1105 aaPredicted RBP32.43■■■□□ 2.78
TMEM238-201ENST00000444469 PALLDQ8WX93 1383 aa32.43■■■□□ 2.78
TMEM238-201ENST00000444469 MORC1Q86VD1 984 aa32.42■■■□□ 2.78
TMEM238-201ENST00000444469 EIF4A2Q14240 407 aaKnown RBP32.41■■■□□ 2.78
TMEM238-201ENST00000444469 KLHL34Q8N239 644 aa32.41■■■□□ 2.78
TMEM238-201ENST00000444469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.41■■■□□ 2.78
TMEM238-201ENST00000444469 KNSTRNQ9Y448 316 aa32.41■■■□□ 2.78
TMEM238-201ENST00000444469 IFNL2Q8IZJ0 200 aa32.38■■■□□ 2.77
TMEM238-201ENST00000444469 NKX1-1Q15270 411 aaPredicted RBP32.36■■■□□ 2.77
TMEM238-201ENST00000444469 TMOD3Q9NYL9 352 aa32.35■■■□□ 2.77
TMEM238-201ENST00000444469 MAP3K5Q99683 1374 aa32.33■■■□□ 2.77
TMEM238-201ENST00000444469 TUBGCP6Q96RT7 1819 aa32.33■■■□□ 2.77
TMEM238-201ENST00000444469 FLAD1Q8NFF5 587 aa32.33■■■□□ 2.77
TMEM238-201ENST00000444469 TOGARAM1Q9Y4F4 1720 aa32.33■■■□□ 2.77
TMEM238-201ENST00000444469 C5P01031 1676 aa32.33■■■□□ 2.77
TMEM238-201ENST00000444469 PHKG2P15735 406 aa32.32■■■□□ 2.76
TMEM238-201ENST00000444469 PIGBQ92521 554 aa32.32■■■□□ 2.76
TMEM238-201ENST00000444469 AK7Q96M32 723 aa32.32■■■□□ 2.76
TMEM238-201ENST00000444469 PLEKHG2Q9H7P9 1386 aa32.32■■■□□ 2.76
TMEM238-201ENST00000444469 ITGB4P16144 1822 aa32.3■■■□□ 2.76
TMEM238-201ENST00000444469 IGSF1Q8N6C5 1336 aa32.3■■■□□ 2.76
TMEM238-201ENST00000444469 COL23A1Q86Y22 540 aaPredicted RBP32.3■■■□□ 2.76
TMEM238-201ENST00000444469 PLEKHO1Q53GL0 409 aaPredicted RBP32.28■■■□□ 2.76
TMEM238-201ENST00000444469 HSP90AB1P08238 724 aaKnown RBP32.27■■■□□ 2.76
TMEM238-201ENST00000444469 GPR162Q16538 588 aa32.25■■■□□ 2.75
TMEM238-201ENST00000444469 KIF7Q2M1P5 1343 aa32.25■■■□□ 2.75
TMEM238-201ENST00000444469 AMOTQ4VCS5 1084 aa32.24■■■□□ 2.75
TMEM238-201ENST00000444469 LOC102724428A0A0B4J2F2 783 aa32.23■■■□□ 2.75
TMEM238-201ENST00000444469 SIK1P57059 783 aa32.23■■■□□ 2.75
TMEM238-201ENST00000444469 MSL1Q68DK7 614 aa32.23■■■□□ 2.75
TMEM238-201ENST00000444469 PELP1Q8IZL8 1130 aaKnown RBP32.23■■■□□ 2.75
TMEM238-201ENST00000444469 C4BP0C0L5 1744 aa32.21■■■□□ 2.75
TMEM238-201ENST00000444469 ZNF530Q6P9A1 599 aaPredicted RBP32.21■■■□□ 2.75
TMEM238-201ENST00000444469 TAF1LQ8IZX4 1826 aa32.21■■■□□ 2.75
TMEM238-201ENST00000444469 COL24A1Q17RW2 1714 aa32.2■■■□□ 2.75
TMEM238-201ENST00000444469 PHF14O94880 888 aa32.2■■■□□ 2.75
TMEM238-201ENST00000444469 C1orf141Q5JVX7 400 aa32.2■■■□□ 2.75
TMEM238-201ENST00000444469 DCAF5Q96JK2 942 aa32.2■■■□□ 2.75
TMEM238-201ENST00000444469 ASAP1Q9ULH1 1129 aa32.2■■■□□ 2.75
TMEM238-201ENST00000444469 ATP6V1AP38606 617 aa32.19■■■□□ 2.74
TMEM238-201ENST00000444469 ERVV-2B6SEH9 535 aa32.18■■■□□ 2.74
TMEM238-201ENST00000444469 AMER1Q5JTC6 1135 aaPredicted RBP32.16■■■□□ 2.74
TMEM238-201ENST00000444469 SULT6B1Q6IMI4 303 aa32.16■■■□□ 2.74
TMEM238-201ENST00000444469 CABP4P57796 275 aa32.15■■■□□ 2.74
TMEM238-201ENST00000444469 ATG3Q9NT62 314 aa32.15■■■□□ 2.74
TMEM238-201ENST00000444469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.14■■■□□ 2.74
TMEM238-201ENST00000444469 SSFA2P28290 1259 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms