RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 RGPD4Q7Z3J3 1758 aa29.85■■■□□ 2.37
TRAF4-205ENST00000444415 PKD1L3Q7Z443 1732 aa29.84■■■□□ 2.37
TRAF4-205ENST00000444415 CC2D1BQ5T0F9 858 aaKnown RBP29.84■■■□□ 2.37
TRAF4-205ENST00000444415 NUP188Q5SRE5 1749 aa29.83■■■□□ 2.37
TRAF4-205ENST00000444415 BCL11BQ9C0K0 894 aaPredicted RBP29.81■■■□□ 2.36
TRAF4-205ENST00000444415 KCNQ2O43526 872 aa29.8■■■□□ 2.36
TRAF4-205ENST00000444415 KAT6BQ8WYB5 2073 aa29.8■■■□□ 2.36
TRAF4-205ENST00000444415 DOT1LQ8TEK3 1739 aa29.8■■■□□ 2.36
TRAF4-205ENST00000444415 BTAF1O14981 1849 aa29.79■■■□□ 2.36
TRAF4-205ENST00000444415 ZCRB1Q8TBF4 217 aaKnown RBP29.79■■■□□ 2.36
TRAF4-205ENST00000444415 DDX54Q8TDD1 881 aaKnown RBP29.79■■■□□ 2.36
TRAF4-205ENST00000444415 RAPGEF4Q8WZA2 1011 aa29.78■■■□□ 2.36
TRAF4-205ENST00000444415 ACSBG1Q96GR2 724 aa29.78■■■□□ 2.36
TRAF4-205ENST00000444415 IGSF1Q8N6C5 1336 aa29.77■■■□□ 2.36
TRAF4-205ENST00000444415 PARD3Q8TEW0 1356 aa29.77■■■□□ 2.36
TRAF4-205ENST00000444415 TATP17735 454 aaPredicted RBP29.75■■■□□ 2.35
TRAF4-205ENST00000444415 TOGARAM1Q9Y4F4 1720 aa29.73■■■□□ 2.35
TRAF4-205ENST00000444415 PLSCR1O15162 318 aa29.73■■■□□ 2.35
TRAF4-205ENST00000444415 MTHFSP49914 203 aa29.73■■■□□ 2.35
TRAF4-205ENST00000444415 CNGB1Q14028 1251 aaPredicted RBP29.73■■■□□ 2.35
TRAF4-205ENST00000444415 CYP27B1O15528 508 aa29.71■■■□□ 2.35
TRAF4-205ENST00000444415 COL3A1P02461 1466 aaPredicted RBP29.71■■■□□ 2.35
TRAF4-205ENST00000444415 IL13P35225 146 aa29.7■■■□□ 2.35
TRAF4-205ENST00000444415 PROM2Q8N271 834 aa29.7■■■□□ 2.35
TRAF4-205ENST00000444415 PCDH11XQ9BZA7 1347 aa29.68■■■□□ 2.34
TRAF4-205ENST00000444415 PCDH11YQ9BZA8 1340 aa29.68■■■□□ 2.34
TRAF4-205ENST00000444415 AEBP1Q8IUX7 1158 aa29.68■■■□□ 2.34
TRAF4-205ENST00000444415 KDRP35968 1356 aa29.65■■■□□ 2.34
TRAF4-205ENST00000444415 ITGB4P16144 1822 aa29.65■■■□□ 2.34
TRAF4-205ENST00000444415 PSDA5PKW4 1024 aaPredicted RBP29.63■■■□□ 2.33
TRAF4-205ENST00000444415 PLEKHG2Q9H7P9 1386 aa29.62■■■□□ 2.33
TRAF4-205ENST00000444415 PRIM1P49642 420 aaKnown RBP29.62■■■□□ 2.33
TRAF4-205ENST00000444415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.62■■■□□ 2.333e-6■□□□□ 10.9
TRAF4-205ENST00000444415 PAPPAQ13219 1627 aa29.6■■■□□ 2.33
TRAF4-205ENST00000444415 LY75O60449 1722 aa29.6■■■□□ 2.33
TRAF4-205ENST00000444415 R3HDM1Q15032 1099 aaKnown RBP29.6■■■□□ 2.33
TRAF4-205ENST00000444415 ANO8Q9HCE9 1232 aaPredicted RBP29.6■■■□□ 2.33
TRAF4-205ENST00000444415 TXNRD1Q16881 649 aa29.59■■■□□ 2.33
TRAF4-205ENST00000444415 NKX1-1Q15270 411 aaPredicted RBP29.58■■■□□ 2.33
TRAF4-205ENST00000444415 SULT6B1Q6IMI4 303 aa29.58■■■□□ 2.33
TRAF4-205ENST00000444415 SPG7Q9UQ90 795 aa29.58■■■□□ 2.33
TRAF4-205ENST00000444415 PHKG2P15735 406 aa29.56■■■□□ 2.32
TRAF4-205ENST00000444415 SYTL4Q96C24 671 aaPredicted RBP29.56■■■□□ 2.32
TRAF4-205ENST00000444415 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
TRAF4-205ENST00000444415 PPP2R1AP30153 589 aa29.55■■■□□ 2.32
TRAF4-205ENST00000444415 DIAPH1O60610 1272 aaKnown RBP29.54■■■□□ 2.32
TRAF4-205ENST00000444415 LRRC4BQ9NT99 713 aa29.53■■■□□ 2.32
TRAF4-205ENST00000444415 DDX10Q13206 875 aaKnown RBP29.51■■■□□ 2.31
TRAF4-205ENST00000444415 IFNL2Q8IZJ0 200 aa29.51■■■□□ 2.31
TRAF4-205ENST00000444415 HMOX1P09601 288 aa29.5■■■□□ 2.31
TRAF4-205ENST00000444415 KDM6AO15550 1401 aaPredicted RBP29.5■■■□□ 2.31
TRAF4-205ENST00000444415 CASZ1Q86V15 1759 aa29.49■■■□□ 2.31
TRAF4-205ENST00000444415 LRP5O75197 1615 aa29.48■■■□□ 2.31
TRAF4-205ENST00000444415 PLEKHO1Q53GL0 409 aaPredicted RBP29.47■■■□□ 2.31
TRAF4-205ENST00000444415 NBPF14Q5TI25 921 aa29.47■■■□□ 2.31
TRAF4-205ENST00000444415 KCNQ4P56696 695 aa29.46■■■□□ 2.31
TRAF4-205ENST00000444415 AMOTQ4VCS5 1084 aa29.46■■■□□ 2.31
TRAF4-205ENST00000444415 MPRIPQ6WCQ1 1025 aa29.46■■■□□ 2.31
TRAF4-205ENST00000444415 PIGBQ92521 554 aa29.46■■■□□ 2.31
TRAF4-205ENST00000444415 VIRMAQ69YN4 1812 aaKnown RBP29.46■■■□□ 2.31
TRAF4-205ENST00000444415 ZNF530Q6P9A1 599 aaPredicted RBP29.45■■■□□ 2.31
TRAF4-205ENST00000444415 TUBGCP6Q96RT7 1819 aa29.44■■■□□ 2.3
TRAF4-205ENST00000444415 SCN11AQ9UI33 1791 aa29.44■■■□□ 2.3
TRAF4-205ENST00000444415 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
TRAF4-205ENST00000444415 PDGFDQ9GZP0 370 aaPredicted RBP29.42■■■□□ 2.3
TRAF4-205ENST00000444415 ZNF827Q17R98 1081 aa29.42■■■□□ 2.3
TRAF4-205ENST00000444415 SLC27A3Q5K4L6 730 aa29.41■■■□□ 2.3
TRAF4-205ENST00000444415 PALLDQ8WX93 1383 aa29.4■■■□□ 2.3
TRAF4-205ENST00000444415 ADAMTS7Q9UKP4 1686 aa29.4■■■□□ 2.3
TRAF4-205ENST00000444415 U2SURPO15042 1029 aaKnown RBP29.4■■■□□ 2.3
TRAF4-205ENST00000444415 SLC15A2Q16348 729 aa29.4■■■□□ 2.3
TRAF4-205ENST00000444415 C5P01031 1676 aa29.39■■■□□ 2.3
TRAF4-205ENST00000444415 DCAF5Q96JK2 942 aa29.39■■■□□ 2.3
TRAF4-205ENST00000444415 QSER1Q2KHR3 1735 aa29.38■■■□□ 2.29
TRAF4-205ENST00000444415 MTHFSDQ2M296 383 aaKnown RBP29.37■■■□□ 2.29
TRAF4-205ENST00000444415 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
TRAF4-205ENST00000444415 CFAP53Q96M91 514 aa29.37■■■□□ 2.29
TRAF4-205ENST00000444415 STK32BQ9NY57 414 aa29.36■■■□□ 2.29
TRAF4-205ENST00000444415 TMOD3Q9NYL9 352 aa29.36■■■□□ 2.29
TRAF4-205ENST00000444415 CCNL1Q9UK58 526 aaPredicted RBP29.36■■■□□ 2.29
TRAF4-205ENST00000444415 ASAP1Q9ULH1 1129 aa29.36■■■□□ 2.29
TRAF4-205ENST00000444415 ERVV-2B6SEH9 535 aa29.35■■■□□ 2.29
TRAF4-205ENST00000444415 HSP90AB1P08238 724 aaKnown RBP29.35■■■□□ 2.29
TRAF4-205ENST00000444415 RSPH6AQ9H0K4 717 aa29.35■■■□□ 2.29
TRAF4-205ENST00000444415 C1orf141Q5JVX7 400 aa29.34■■■□□ 2.29
TRAF4-205ENST00000444415 AKAP4Q5JQC9 854 aa29.33■■■□□ 2.29
TRAF4-205ENST00000444415 MRC1P22897 1456 aa29.33■■■□□ 2.29
TRAF4-205ENST00000444415 ATG3Q9NT62 314 aa29.32■■■□□ 2.28
TRAF4-205ENST00000444415 PHACTR3Q96KR7 559 aa29.3■■■□□ 2.28
TRAF4-205ENST00000444415 LGR6Q9HBX8 967 aa29.3■■■□□ 2.28
TRAF4-205ENST00000444415 RALBP1Q15311 655 aa29.29■■■□□ 2.28
TRAF4-205ENST00000444415 SMARCC1Q92922 1105 aaPredicted RBP29.29■■■□□ 2.28
TRAF4-205ENST00000444415 C4BP0C0L5 1744 aa29.29■■■□□ 2.28
TRAF4-205ENST00000444415 PRKAR2BP31323 418 aa29.29■■■□□ 2.28
TRAF4-205ENST00000444415 ZNF831Q5JPB2 1677 aa29.27■■■□□ 2.28
TRAF4-205ENST00000444415 U2AF1L5P0DN76 240 aaPredicted RBP29.27■■■□□ 2.28
TRAF4-205ENST00000444415 U2AF1Q01081 240 aaKnown RBP eCLIP29.27■■■□□ 2.283e-7■■□□□ 12.8
TRAF4-205ENST00000444415 NUDCQ9Y266 331 aa29.27■■■□□ 2.28
TRAF4-205ENST00000444415 PNPLA7Q6ZV29 1317 aa29.26■■■□□ 2.27
TRAF4-205ENST00000444415 LOC102724428A0A0B4J2F2 783 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms