RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PKD1L3Q7Z443 1732 aa21.21■□□□□ 0.99
SYNCRIP-203ENST00000444272 FOXN1O15353 648 aa21.21■□□□□ 0.99
SYNCRIP-203ENST00000444272 IL2RBP14784 551 aa21.21■□□□□ 0.99
SYNCRIP-203ENST00000444272 PRDM10Q9NQV6 1147 aa21.21■□□□□ 0.99
SYNCRIP-203ENST00000444272 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
SYNCRIP-203ENST00000444272 SOX12O15370 315 aa21.2■□□□□ 0.98
SYNCRIP-203ENST00000444272 ARHGAP27Q6ZUM4 889 aa21.2■□□□□ 0.98
SYNCRIP-203ENST00000444272 USP54Q70EL1 1684 aa21.2■□□□□ 0.98
SYNCRIP-203ENST00000444272 KDM2BQ8NHM5 1336 aa21.2■□□□□ 0.98
SYNCRIP-203ENST00000444272 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
SYNCRIP-203ENST00000444272 BCS1LQ9Y276 419 aa21.19■□□□□ 0.98
SYNCRIP-203ENST00000444272 C5P01031 1676 aa21.18■□□□□ 0.98
SYNCRIP-203ENST00000444272 ABHD8Q96I13 439 aa21.18■□□□□ 0.98
SYNCRIP-203ENST00000444272 C9orf131Q5VYM1 1079 aa21.17■□□□□ 0.98
SYNCRIP-203ENST00000444272 QRICH2Q9H0J4 1663 aa21.17■□□□□ 0.98
SYNCRIP-203ENST00000444272 N4BP2Q86UW6 1770 aaPredicted RBP21.16■□□□□ 0.98
SYNCRIP-203ENST00000444272 PXDNLA1KZ92 1463 aa21.16■□□□□ 0.98
SYNCRIP-203ENST00000444272 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
SYNCRIP-203ENST00000444272 KIAA1551Q9HCM1 1747 aa21.15■□□□□ 0.98
SYNCRIP-203ENST00000444272 NSD2O96028 1365 aa21.15■□□□□ 0.98
SYNCRIP-203ENST00000444272 FLAD1Q8NFF5 587 aa21.15■□□□□ 0.98
SYNCRIP-203ENST00000444272 DDX54Q8TDD1 881 aaKnown RBP21.15■□□□□ 0.98
SYNCRIP-203ENST00000444272 NLRP2Q9NX02 1062 aa21.15■□□□□ 0.98
SYNCRIP-203ENST00000444272 ANKRD36BQ8N2N9 1353 aa21.14■□□□□ 0.98
SYNCRIP-203ENST00000444272 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
SYNCRIP-203ENST00000444272 TNRC18O15417 2968 aaPredicted RBP21.1■□□□□ 0.97
SYNCRIP-203ENST00000444272 NFAT5O94916 1531 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 ERBB3P21860 1342 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 CTCFP49711 727 aaPredicted RBP21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 RGS19P49795 217 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 SMIM5Q71RC9 77 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 MKRN1Q9UHC7 482 aaKnown RBP21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 USP47Q96K76 1375 aa21.09■□□□□ 0.97
SYNCRIP-203ENST00000444272 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.97
SYNCRIP-203ENST00000444272 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
SYNCRIP-203ENST00000444272 A0A0G2JLW4 131 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 FCHSD2O94868 740 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 AMIGO3Q86WK7 504 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 AIDAQ96BJ3 306 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 RNF181Q9P0P0 153 aa21.06■□□□□ 0.96
SYNCRIP-203ENST00000444272 PHF14O94880 888 aa21.05■□□□□ 0.96
SYNCRIP-203ENST00000444272 LBX1P52954 281 aa21.05■□□□□ 0.96
SYNCRIP-203ENST00000444272 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
SYNCRIP-203ENST00000444272 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
SYNCRIP-203ENST00000444272 UBR3Q6ZT12 1888 aa21.03■□□□□ 0.96
SYNCRIP-203ENST00000444272 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
SYNCRIP-203ENST00000444272 ARFGEF1Q9Y6D6 1849 aa21.02■□□□□ 0.96
SYNCRIP-203ENST00000444272 TGFB2P61812 414 aa21.02■□□□□ 0.96
SYNCRIP-203ENST00000444272 CABP1Q9NZU7 370 aa21.02■□□□□ 0.96
SYNCRIP-203ENST00000444272 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
SYNCRIP-203ENST00000444272 AK7Q96M32 723 aa21.01■□□□□ 0.95
SYNCRIP-203ENST00000444272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.99■□□□□ 0.95
SYNCRIP-203ENST00000444272 LTN1O94822 1766 aa20.98■□□□□ 0.95
SYNCRIP-203ENST00000444272 DPEP1P16444 411 aa20.98■□□□□ 0.95
SYNCRIP-203ENST00000444272 ANKRD24Q8TF21 1146 aa20.98■□□□□ 0.95
SYNCRIP-203ENST00000444272 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
SYNCRIP-203ENST00000444272 SBF1O95248 1867 aa20.98■□□□□ 0.95
SYNCRIP-203ENST00000444272 VEGFAP15692 232 aaPredicted RBP20.97■□□□□ 0.95
SYNCRIP-203ENST00000444272 TTC21BQ7Z4L5 1316 aa20.97■□□□□ 0.95
SYNCRIP-203ENST00000444272 MMP10P09238 476 aa20.96■□□□□ 0.95
SYNCRIP-203ENST00000444272 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
SYNCRIP-203ENST00000444272 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
SYNCRIP-203ENST00000444272 PDE4DIPQ5VU43 2346 aa20.95■□□□□ 0.94
SYNCRIP-203ENST00000444272 CNTNAP1P78357 1384 aa20.95■□□□□ 0.94
SYNCRIP-203ENST00000444272 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
SYNCRIP-203ENST00000444272 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
SYNCRIP-203ENST00000444272 PALLDQ8WX93 1383 aa20.93■□□□□ 0.94
SYNCRIP-203ENST00000444272 HSPA8P11142 646 aaKnown RBP20.92■□□□□ 0.94
SYNCRIP-203ENST00000444272 WBP1LQ9NX94 342 aa20.92■□□□□ 0.94
SYNCRIP-203ENST00000444272 SSFA2P28290 1259 aa20.91■□□□□ 0.94
SYNCRIP-203ENST00000444272 CFAP44Q96MT7 982 aa20.91■□□□□ 0.94
SYNCRIP-203ENST00000444272 VIRMAQ69YN4 1812 aaKnown RBP20.9■□□□□ 0.94
SYNCRIP-203ENST00000444272 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
SYNCRIP-203ENST00000444272 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
SYNCRIP-203ENST00000444272 GLTPD2A6NH11 291 aa20.88■□□□□ 0.93
SYNCRIP-203ENST00000444272 KCNA3P22001 575 aa20.88■□□□□ 0.93
SYNCRIP-203ENST00000444272 FAM208AQ9UK61 1670 aaKnown RBP20.87■□□□□ 0.93
SYNCRIP-203ENST00000444272 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
SYNCRIP-203ENST00000444272 VEGFBP49765 207 aa20.87■□□□□ 0.93
SYNCRIP-203ENST00000444272 ZCRB1Q8TBF4 217 aaKnown RBP20.87■□□□□ 0.93
SYNCRIP-203ENST00000444272 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
SYNCRIP-203ENST00000444272 DALRD3Q5D0E6 543 aaKnown RBP20.85■□□□□ 0.93
SYNCRIP-203ENST00000444272 CCDC87Q9NVE4 849 aa20.85■□□□□ 0.93
SYNCRIP-203ENST00000444272 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
SYNCRIP-203ENST00000444272 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
SYNCRIP-203ENST00000444272 RASSF7Q02833 373 aa20.82■□□□□ 0.92
SYNCRIP-203ENST00000444272 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
SYNCRIP-203ENST00000444272 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
SYNCRIP-203ENST00000444272 MEGF6O75095 1541 aa20.82■□□□□ 0.92
SYNCRIP-203ENST00000444272 POTECB2RU33 542 aa20.81■□□□□ 0.92
SYNCRIP-203ENST00000444272 KDM6AO15550 1401 aaPredicted RBP20.8■□□□□ 0.92
SYNCRIP-203ENST00000444272 GNPATO15228 680 aa20.8■□□□□ 0.92
SYNCRIP-203ENST00000444272 CHADLQ6NUI6 762 aa20.8■□□□□ 0.92
SYNCRIP-203ENST00000444272 MPRIPQ6WCQ1 1025 aa20.8■□□□□ 0.92
SYNCRIP-203ENST00000444272 LINC00116Q8NCU8 138 aa20.8■□□□□ 0.92
SYNCRIP-203ENST00000444272 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms