RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NPR3P17342 541 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 DMRTA1Q5VZB9 504 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 PIK3R5Q8WYR1 880 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 RBCK1Q9BYM8 510 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 EVA1BQ9NVM1 165 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 DOLKQ9UPQ8 538 aa7.95□□□□□ -1.14
TM9SF3-202ENST00000443638 PPM1GO15355 546 aaPredicted RBP7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 CTHP32929 405 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 MTMR3Q13615 1198 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 CAPN12Q6ZSI9 719 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 COL26A1Q96A83 441 aa7.94□□□□□ -1.14
TM9SF3-202ENST00000443638 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 FKBP5Q13451 457 aaPredicted RBP7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 BCL11AQ9H165 835 aa7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 PPP1R1BQ9UD71 204 aaPredicted RBP7.93□□□□□ -1.14
TM9SF3-202ENST00000443638 M0R2N6 131 aa7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 GIMAP6Q6P9H5 292 aa7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 TMC7Q7Z402 723 aa7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 HELQQ8TDG4 1101 aa7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 STAC3Q96MF2 364 aa7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
TM9SF3-202ENST00000443638 TREHO43280 583 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 RNF40O75150 1001 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 DXOO77932 396 aaKnown RBP7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 ARHGAP9Q9BRR9 750 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 TINF2Q9BSI4 451 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 CHMP4AQ9BY43 222 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 VPS9D1Q9Y2B5 631 aa7.91□□□□□ -1.14
TM9SF3-202ENST00000443638 MSS51Q4VC12 460 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 OXLD1Q5BKU9 147 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 C9orf131Q5VYM1 1079 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 DPH6Q7L8W6 267 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 KCTD12Q96CX2 325 aaKnown RBP7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 MKNK1Q9BUB5 465 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
TM9SF3-202ENST00000443638 LGR5O75473 907 aa7.89□□□□□ -1.15
TM9SF3-202ENST00000443638 DSC3Q14574 896 aa7.89□□□□□ -1.15
TM9SF3-202ENST00000443638 SLC43A3Q8NBI5 491 aa7.89□□□□□ -1.15
TM9SF3-202ENST00000443638 ZFRQ96KR1 1074 aaKnown RBP7.89□□□□□ -1.15
TM9SF3-202ENST00000443638 RBM19Q9Y4C8 960 aaKnown RBP7.89□□□□□ -1.15
TM9SF3-202ENST00000443638 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 GIGYF1O75420 1035 aaPredicted RBP7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 IGHA2P01877 340 aa7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 MMP16P51512 607 aa7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 SH3RF1Q7Z6J0 888 aa7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 NUDT12Q9BQG2 462 aa7.88□□□□□ -1.15
TM9SF3-202ENST00000443638 NCLP19338 710 aaKnown RBP7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 FANCCQ00597 558 aa7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 TSEN2Q8NCE0 465 aaKnown RBP7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 METTL5Q9NRN9 209 aaKnown RBP7.87□□□□□ -1.15
TM9SF3-202ENST00000443638 FAM13AO94988 1023 aa7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 TMC4Q7Z404 712 aa7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 ZBTB33Q86T24 672 aa7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 NOP9Q86U38 636 aaKnown RBP7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 HINFPQ9BQA5 517 aa7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 CUEDC1Q9NWM3 386 aaPredicted RBP7.86□□□□□ -1.15
TM9SF3-202ENST00000443638 ESPNB1AK53 854 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 NR1I2O75469 434 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 IGFBP4P22692 258 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 PSME1Q06323 249 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 ANKRD13AQ8IZ07 590 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 TANGO6Q9C0B7 1094 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 TGIF2Q9GZN2 237 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 NBPF3Q9H094 633 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 BRPF3Q9ULD4 1205 aa7.85□□□□□ -1.15
TM9SF3-202ENST00000443638 APLP1P51693 650 aa7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 USP4Q13107 963 aa7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 ARMC5Q96C12 935 aa7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 LNPKQ9C0E8 428 aa7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 PARP2Q9UGN5 583 aa7.84□□□□□ -1.15
TM9SF3-202ENST00000443638 ANKRD62A6NC57 917 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 FOXO3O43524 673 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 NDUFB5O43674 189 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 DAB2P98082 770 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 FGD1P98174 961 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 NAA30Q147X3 362 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 IFFO2Q5TF58 517 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 LRCH3Q96II8 777 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 FAM161BQ96MY7 647 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 GMLQ99445 158 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 RNF19AQ9NV58 838 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
TM9SF3-202ENST00000443638 RGS20O76081 388 aa7.82□□□□□ -1.16
TM9SF3-202ENST00000443638 LDHBP07195 334 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms