RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 ABCA6Q8N139 1617 aa13.02□□□□□ -0.32
CALD1-210ENST00000443197 SRGAP3O43295 1099 aa13.02□□□□□ -0.32
CALD1-210ENST00000443197 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.32
CALD1-210ENST00000443197 ZNF521Q96K83 1311 aa13.02□□□□□ -0.32
CALD1-210ENST00000443197 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.32
CALD1-210ENST00000443197 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
CALD1-210ENST00000443197 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
CALD1-210ENST00000443197 CDC45O75419 566 aa13.02□□□□□ -0.33
CALD1-210ENST00000443197 MEIS3Q99687 375 aa13.02□□□□□ -0.33
CALD1-210ENST00000443197 C19orf44Q9H6X5 657 aa13.02□□□□□ -0.33
CALD1-210ENST00000443197 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
CALD1-210ENST00000443197 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
CALD1-210ENST00000443197 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
CALD1-210ENST00000443197 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
CALD1-210ENST00000443197 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
CALD1-210ENST00000443197 ADGRB3O60242 1522 aa13□□□□□ -0.33
CALD1-210ENST00000443197 ST18O60284 1047 aa13□□□□□ -0.33
CALD1-210ENST00000443197 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
CALD1-210ENST00000443197 REC8O95072 547 aa13□□□□□ -0.33
CALD1-210ENST00000443197 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
CALD1-210ENST00000443197 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
CALD1-210ENST00000443197 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
CALD1-210ENST00000443197 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
CALD1-210ENST00000443197 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
CALD1-210ENST00000443197 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
CALD1-210ENST00000443197 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
CALD1-210ENST00000443197 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
CALD1-210ENST00000443197 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
CALD1-210ENST00000443197 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
CALD1-210ENST00000443197 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 G2E3Q7L622 706 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
CALD1-210ENST00000443197 GLI2P10070 1586 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 ADAMTS2O95450 1211 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
CALD1-210ENST00000443197 LMTK2Q8IWU2 1503 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
CALD1-210ENST00000443197 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
CALD1-210ENST00000443197 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
CALD1-210ENST00000443197 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 KAT6BQ8WYB5 2073 aa12.97□□□□□ -0.33
CALD1-210ENST00000443197 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
CALD1-210ENST00000443197 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.33
CALD1-210ENST00000443197 SEC24BO95487 1268 aa12.96□□□□□ -0.34
CALD1-210ENST00000443197 PLCB2Q00722 1185 aa12.96□□□□□ -0.34
CALD1-210ENST00000443197 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.34
CALD1-210ENST00000443197 IP6K1Q92551 441 aa12.96□□□□□ -0.34
CALD1-210ENST00000443197 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 INSRP06213 1382 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
CALD1-210ENST00000443197 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
CALD1-210ENST00000443197 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
CALD1-210ENST00000443197 TRIM44Q96DX7 344 aaPredicted RBP12.94□□□□□ -0.34
CALD1-210ENST00000443197 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
CALD1-210ENST00000443197 PTPRCP08575 1304 aa12.94□□□□□ -0.34
CALD1-210ENST00000443197 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
CALD1-210ENST00000443197 CHL1O00533 1208 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
CALD1-210ENST00000443197 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 MSH6P52701 1360 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
CALD1-210ENST00000443197 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
CALD1-210ENST00000443197 NEK4P51957 841 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 FRMPD1Q5SYB0 1578 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 NLRP1Q9C000 1473 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 MYD88Q99836 296 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
CALD1-210ENST00000443197 ERC2O15083 957 aa12.91□□□□□ -0.34
CALD1-210ENST00000443197 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
CALD1-210ENST00000443197 NUCB1Q02818 461 aa12.91□□□□□ -0.34
CALD1-210ENST00000443197 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
CALD1-210ENST00000443197 TULP4Q9NRJ4 1543 aa12.91□□□□□ -0.34
CALD1-210ENST00000443197 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
CALD1-210ENST00000443197 NEXMIFQ5QGS0 1516 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 CLTCQ00610 1675 aaKnown RBP12.9□□□□□ -0.34
CALD1-210ENST00000443197 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 AACSQ86V21 672 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 FSD1Q9BTV5 496 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 USP6P35125 1406 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 QRICH2Q9H0J4 1663 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 GOLGA6L4A6NEF3 574 aa12.9□□□□□ -0.34
CALD1-210ENST00000443197 GSE1Q14687 1217 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms