RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PLSCR1O15162 318 aa28.81■■■□□ 2.2
CDKN3-204ENST00000442975 NUP188Q5SRE5 1749 aa28.8■■■□□ 2.2
CDKN3-204ENST00000442975 NHSQ6T4R5 1651 aa28.8■■■□□ 2.2
CDKN3-204ENST00000442975 NBPF14Q5TI25 921 aa28.8■■■□□ 2.2
CDKN3-204ENST00000442975 RGPD3A6NKT7 1758 aaPredicted RBP28.77■■■□□ 2.2
CDKN3-204ENST00000442975 RGPD4Q7Z3J3 1758 aa28.77■■■□□ 2.2
CDKN3-204ENST00000442975 AMER1Q5JTC6 1135 aaPredicted RBP28.76■■■□□ 2.19
CDKN3-204ENST00000442975 SYTL4Q96C24 671 aaPredicted RBP28.76■■■□□ 2.19
CDKN3-204ENST00000442975 EIF4A2Q14240 407 aaKnown RBP28.75■■■□□ 2.19
CDKN3-204ENST00000442975 EYA1Q99502 592 aa28.74■■■□□ 2.19
CDKN3-204ENST00000442975 PCDH11XQ9BZA7 1347 aa28.73■■■□□ 2.19
CDKN3-204ENST00000442975 PCDH11YQ9BZA8 1340 aa28.73■■■□□ 2.19
CDKN3-204ENST00000442975 NCAPD2Q15021 1401 aa28.73■■■□□ 2.19
CDKN3-204ENST00000442975 TXNRD1Q16881 649 aa28.73■■■□□ 2.19
CDKN3-204ENST00000442975 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
CDKN3-204ENST00000442975 PROM2Q8N271 834 aa28.71■■■□□ 2.19
CDKN3-204ENST00000442975 SHANK3Q9BYB0 1731 aa28.71■■■□□ 2.19
CDKN3-204ENST00000442975 PRIM1P49642 420 aaKnown RBP28.7■■■□□ 2.18
CDKN3-204ENST00000442975 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.18
CDKN3-204ENST00000442975 CC2D1BQ5T0F9 858 aaKnown RBP28.7■■■□□ 2.18
CDKN3-204ENST00000442975 MAP2P11137 1827 aaKnown RBP28.7■■■□□ 2.18
CDKN3-204ENST00000442975 DOT1LQ8TEK3 1739 aa28.68■■■□□ 2.18
CDKN3-204ENST00000442975 BTAF1O14981 1849 aa28.66■■■□□ 2.18
CDKN3-204ENST00000442975 LRP5O75197 1615 aa28.65■■■□□ 2.18
CDKN3-204ENST00000442975 CYP27B1O15528 508 aa28.65■■■□□ 2.18
CDKN3-204ENST00000442975 PER1O15534 1290 aaPredicted RBP28.65■■■□□ 2.18
CDKN3-204ENST00000442975 STK32BQ9NY57 414 aa28.64■■■□□ 2.18
CDKN3-204ENST00000442975 SPG7Q9UQ90 795 aa28.64■■■□□ 2.18
CDKN3-204ENST00000442975 IGSF1Q8N6C5 1336 aa28.64■■■□□ 2.17
CDKN3-204ENST00000442975 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
CDKN3-204ENST00000442975 MTHFSP49914 203 aa28.57■■■□□ 2.16
CDKN3-204ENST00000442975 AEBP1Q8IUX7 1158 aa28.57■■■□□ 2.16
CDKN3-204ENST00000442975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.57■■■□□ 2.16
CDKN3-204ENST00000442975 SLC15A2Q16348 729 aa28.56■■■□□ 2.16
CDKN3-204ENST00000442975 MPRIPQ6WCQ1 1025 aa28.56■■■□□ 2.16
CDKN3-204ENST00000442975 LRRC4BQ9NT99 713 aa28.56■■■□□ 2.16
CDKN3-204ENST00000442975 NPC1L1Q9UHC9 1359 aa28.56■■■□□ 2.16
CDKN3-204ENST00000442975 SLC27A3Q5K4L6 730 aa28.55■■■□□ 2.16
CDKN3-204ENST00000442975 KCNQ4P56696 695 aa28.54■■■□□ 2.16
CDKN3-204ENST00000442975 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
CDKN3-204ENST00000442975 PHKG2P15735 406 aa28.53■■■□□ 2.16
CDKN3-204ENST00000442975 IL13P35225 146 aa28.53■■■□□ 2.16
CDKN3-204ENST00000442975 SULT6B1Q6IMI4 303 aa28.53■■■□□ 2.16
CDKN3-204ENST00000442975 IFNL2Q8IZJ0 200 aa28.53■■■□□ 2.16
CDKN3-204ENST00000442975 PDGFDQ9GZP0 370 aaPredicted RBP28.53■■■□□ 2.16
CDKN3-204ENST00000442975 PAPPAQ13219 1627 aa28.53■■■□□ 2.16
CDKN3-204ENST00000442975 ZNF827Q17R98 1081 aa28.52■■■□□ 2.16
CDKN3-204ENST00000442975 CCNL1Q9UK58 526 aaPredicted RBP28.52■■■□□ 2.16
CDKN3-204ENST00000442975 PLEKHG2Q9H7P9 1386 aa28.51■■■□□ 2.16
CDKN3-204ENST00000442975 NKX1-1Q15270 411 aaPredicted RBP28.51■■■□□ 2.15
CDKN3-204ENST00000442975 TOGARAM1Q9Y4F4 1720 aa28.51■■■□□ 2.15
CDKN3-204ENST00000442975 SPON1Q9HCB6 807 aa28.5■■■□□ 2.15
CDKN3-204ENST00000442975 PALLDQ8WX93 1383 aa28.5■■■□□ 2.15
CDKN3-204ENST00000442975 ZBTB7AO95365 584 aa28.49■■■□□ 2.15
CDKN3-204ENST00000442975 PLEKHO1Q53GL0 409 aaPredicted RBP28.49■■■□□ 2.15
CDKN3-204ENST00000442975 ZNF530Q6P9A1 599 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-204ENST00000442975 PPP1R1BQ9UD71 204 aaPredicted RBP28.47■■■□□ 2.15
CDKN3-204ENST00000442975 KDRP35968 1356 aa28.47■■■□□ 2.15
CDKN3-204ENST00000442975 CASZ1Q86V15 1759 aa28.47■■■□□ 2.15
CDKN3-204ENST00000442975 AMOTQ4VCS5 1084 aa28.46■■■□□ 2.15
CDKN3-204ENST00000442975 PIGBQ92521 554 aa28.46■■■□□ 2.15
CDKN3-204ENST00000442975 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
CDKN3-204ENST00000442975 DIAPH1O60610 1272 aaKnown RBP28.45■■■□□ 2.14
CDKN3-204ENST00000442975 AKT1S1Q96B36 256 aa28.44■■■□□ 2.14
CDKN3-204ENST00000442975 HMOX1P09601 288 aa28.43■■■□□ 2.14
CDKN3-204ENST00000442975 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
CDKN3-204ENST00000442975 SMARCC1Q92922 1105 aaPredicted RBP28.43■■■□□ 2.14
CDKN3-204ENST00000442975 HSP90AB1P08238 724 aaKnown RBP28.42■■■□□ 2.14
CDKN3-204ENST00000442975 TFCP2L1Q9NZI6 479 aa28.42■■■□□ 2.14
CDKN3-204ENST00000442975 LY75O60449 1722 aa28.42■■■□□ 2.14
CDKN3-204ENST00000442975 ATF5Q9Y2D1 282 aaPredicted RBP28.41■■■□□ 2.14
CDKN3-204ENST00000442975 COL3A1P02461 1466 aaPredicted RBP28.4■■■□□ 2.14
CDKN3-204ENST00000442975 U2SURPO15042 1029 aaKnown RBP28.39■■■□□ 2.14
CDKN3-204ENST00000442975 DCAF5Q96JK2 942 aa28.39■■■□□ 2.14
CDKN3-204ENST00000442975 KDM6AO15550 1401 aaPredicted RBP28.38■■■□□ 2.13
CDKN3-204ENST00000442975 MTFR1LQ9H019 292 aa28.38■■■□□ 2.13
CDKN3-204ENST00000442975 CFAP53Q96M91 514 aa28.36■■■□□ 2.13
CDKN3-204ENST00000442975 ASAP1Q9ULH1 1129 aa28.36■■■□□ 2.13
CDKN3-204ENST00000442975 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
CDKN3-204ENST00000442975 ITGB4P16144 1822 aa28.35■■■□□ 2.13
CDKN3-204ENST00000442975 ERVV-2B6SEH9 535 aa28.34■■■□□ 2.13
CDKN3-204ENST00000442975 PPP2R1AP30153 589 aa28.33■■■□□ 2.13
CDKN3-204ENST00000442975 PTGER2P43116 358 aa28.33■■■□□ 2.13
CDKN3-204ENST00000442975 CABP4P57796 275 aa28.33■■■□□ 2.13
CDKN3-204ENST00000442975 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
CDKN3-204ENST00000442975 MSH5O43196 834 aa28.32■■■□□ 2.12
CDKN3-204ENST00000442975 SIK1P57059 783 aa28.32■■■□□ 2.12
CDKN3-204ENST00000442975 ATG3Q9NT62 314 aa28.32■■■□□ 2.12
CDKN3-204ENST00000442975 C5P01031 1676 aa28.3■■■□□ 2.12
CDKN3-204ENST00000442975 AK7Q96M32 723 aa28.3■■■□□ 2.12
CDKN3-204ENST00000442975 AKAP4Q5JQC9 854 aa28.29■■■□□ 2.12
CDKN3-204ENST00000442975 HMGB2P26583 209 aaKnown RBP28.28■■■□□ 2.12
CDKN3-204ENST00000442975 MTHFSDQ2M296 383 aaKnown RBP28.27■■■□□ 2.12
CDKN3-204ENST00000442975 ATP6V1AP38606 617 aa28.26■■■□□ 2.11
CDKN3-204ENST00000442975 LINC00116Q8NCU8 138 aa28.26■■■□□ 2.11
CDKN3-204ENST00000442975 RBM42Q9BTD8 480 aaKnown RBP28.26■■■□□ 2.11
CDKN3-204ENST00000442975 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
CDKN3-204ENST00000442975 ITPK1Q13572 414 aa28.25■■■□□ 2.11
CDKN3-204ENST00000442975 SLC16A10Q8TF71 515 aa28.25■■■□□ 2.11
CDKN3-204ENST00000442975 QSER1Q2KHR3 1735 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms