RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 HOXC9P31274 260 aa16.83■□□□□ 0.28
TNXB-202ENST00000442721 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.28
TNXB-202ENST00000442721 MEGF6O75095 1541 aa16.82■□□□□ 0.28
TNXB-202ENST00000442721 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
TNXB-202ENST00000442721 COG3Q96JB2 828 aa16.81■□□□□ 0.28
TNXB-202ENST00000442721 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
TNXB-202ENST00000442721 FBLN1P23142 703 aa16.8■□□□□ 0.28
TNXB-202ENST00000442721 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
TNXB-202ENST00000442721 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
TNXB-202ENST00000442721 AMPHP49418 695 aa16.79■□□□□ 0.28
TNXB-202ENST00000442721 KCNQ4P56696 695 aa16.79■□□□□ 0.28
TNXB-202ENST00000442721 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
TNXB-202ENST00000442721 POLD1P28340 1107 aa16.78■□□□□ 0.28
TNXB-202ENST00000442721 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
TNXB-202ENST00000442721 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
TNXB-202ENST00000442721 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
TNXB-202ENST00000442721 GPR162Q16538 588 aa16.76■□□□□ 0.27
TNXB-202ENST00000442721 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
TNXB-202ENST00000442721 GOLGB1Q14789 3259 aaKnown RBP16.75■□□□□ 0.27
TNXB-202ENST00000442721 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
TNXB-202ENST00000442721 NBPF6Q5VWK0 638 aa16.75■□□□□ 0.27
TNXB-202ENST00000442721 NBPF4Q96M43 638 aa16.75■□□□□ 0.27
TNXB-202ENST00000442721 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
TNXB-202ENST00000442721 FYB1O15117 783 aa16.74■□□□□ 0.27
TNXB-202ENST00000442721 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
TNXB-202ENST00000442721 KLHL34Q8N239 644 aa16.73■□□□□ 0.27
TNXB-202ENST00000442721 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
TNXB-202ENST00000442721 USP47Q96K76 1375 aa16.73■□□□□ 0.27
TNXB-202ENST00000442721 USHBP1Q8N6Y0 703 aa16.72■□□□□ 0.27
TNXB-202ENST00000442721 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
TNXB-202ENST00000442721 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
TNXB-202ENST00000442721 COL23A1Q86Y22 540 aaPredicted RBP16.71■□□□□ 0.27
TNXB-202ENST00000442721 INSRP06213 1382 aa16.71■□□□□ 0.27
TNXB-202ENST00000442721 C5P01031 1676 aa16.71■□□□□ 0.27
TNXB-202ENST00000442721 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
TNXB-202ENST00000442721 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
TNXB-202ENST00000442721 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
TNXB-202ENST00000442721 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
TNXB-202ENST00000442721 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNXB-202ENST00000442721 TATP17735 454 aaPredicted RBP16.69■□□□□ 0.26
TNXB-202ENST00000442721 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
TNXB-202ENST00000442721 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
TNXB-202ENST00000442721 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
TNXB-202ENST00000442721 FLT4P35916 1363 aa16.68■□□□□ 0.26
TNXB-202ENST00000442721 TMF1P82094 1093 aa16.68■□□□□ 0.26
TNXB-202ENST00000442721 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
TNXB-202ENST00000442721 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
TNXB-202ENST00000442721 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
TNXB-202ENST00000442721 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
TNXB-202ENST00000442721 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
TNXB-202ENST00000442721 CYP27B1O15528 508 aa16.66■□□□□ 0.26
TNXB-202ENST00000442721 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
TNXB-202ENST00000442721 GIGYF1O75420 1035 aaPredicted RBP16.66■□□□□ 0.26
TNXB-202ENST00000442721 ITGB4P16144 1822 aa16.66■□□□□ 0.26
TNXB-202ENST00000442721 MSH5O43196 834 aa16.65■□□□□ 0.26
TNXB-202ENST00000442721 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
TNXB-202ENST00000442721 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
TNXB-202ENST00000442721 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
TNXB-202ENST00000442721 CD2APQ9Y5K6 639 aa16.64■□□□□ 0.25
TNXB-202ENST00000442721 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
TNXB-202ENST00000442721 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
TNXB-202ENST00000442721 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
TNXB-202ENST00000442721 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
TNXB-202ENST00000442721 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
TNXB-202ENST00000442721 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
TNXB-202ENST00000442721 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
TNXB-202ENST00000442721 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
TNXB-202ENST00000442721 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
TNXB-202ENST00000442721 AMIGO3Q86WK7 504 aa16.61■□□□□ 0.25
TNXB-202ENST00000442721 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
TNXB-202ENST00000442721 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
TNXB-202ENST00000442721 PIGBQ92521 554 aa16.6■□□□□ 0.25
TNXB-202ENST00000442721 ADCY9O60503 1353 aa16.59■□□□□ 0.25
TNXB-202ENST00000442721 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
TNXB-202ENST00000442721 AK7Q96M32 723 aa16.58■□□□□ 0.24
TNXB-202ENST00000442721 WASHC2AQ641Q2 1341 aa16.57■□□□□ 0.24
TNXB-202ENST00000442721 CEP350Q5VT06 3117 aa16.57■□□□□ 0.24
TNXB-202ENST00000442721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
TNXB-202ENST00000442721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
TNXB-202ENST00000442721 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
TNXB-202ENST00000442721 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 KCNA4P22459 653 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 SSFA2P28290 1259 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 SIK1P57059 783 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 EYA1Q99502 592 aa16.55■□□□□ 0.24
TNXB-202ENST00000442721 PHF14O94880 888 aa16.54■□□□□ 0.24
TNXB-202ENST00000442721 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
TNXB-202ENST00000442721 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
TNXB-202ENST00000442721 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
TNXB-202ENST00000442721 PHKG2P15735 406 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 ITPK1Q13572 414 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 POLKQ9UBT6 870 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
TNXB-202ENST00000442721 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
TNXB-202ENST00000442721 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
TNXB-202ENST00000442721 GPBP1L1Q9HC44 474 aaPredicted RBP16.5■□□□□ 0.23
TNXB-202ENST00000442721 KDRP35968 1356 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms