RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 LETM1O95202 739 aaPredicted RBP21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 BMP2KLQ5H9B9 411 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 LRSAM1Q6UWE0 723 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 FAM135BQ49AJ0 1406 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 CPS1P31327 1500 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 DNTTIP2Q5QJE6 756 aaKnown RBP21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 TBC1D9Q6ZT07 1266 aa21.17■□□□□ 0.98
TNRC18P3-201ENST00000441896 RNF214Q8ND24 703 aa21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 SMC4Q9NTJ3 1288 aa21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 TMEM63CQ9P1W3 806 aa21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 CHD1LQ86WJ1 897 aa21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
TNRC18P3-201ENST00000441896 NUCB2P80303 420 aa21.15■□□□□ 0.98
TNRC18P3-201ENST00000441896 PTMAP06454 111 aaKnown RBP21.14■□□□□ 0.98
TNRC18P3-201ENST00000441896 CHAMP1Q96JM3 812 aa21.14■□□□□ 0.97
TNRC18P3-201ENST00000441896 NSFL1CQ9UNZ2 370 aaKnown RBP21.14■□□□□ 0.97
TNRC18P3-201ENST00000441896 TSR2Q969E8 191 aaKnown RBP21.13■□□□□ 0.97
TNRC18P3-201ENST00000441896 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
TNRC18P3-201ENST00000441896 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
TNRC18P3-201ENST00000441896 TMEM51Q9NW97 253 aa21.13■□□□□ 0.97
TNRC18P3-201ENST00000441896 GTF2F1P35269 517 aaKnown RBP eCLIP21.12■□□□□ 0.97
TNRC18P3-201ENST00000441896 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
TNRC18P3-201ENST00000441896 ZBTB40Q9NUA8 1239 aa21.12■□□□□ 0.97
TNRC18P3-201ENST00000441896 ATAD2Q6PL18 1390 aa21.12■□□□□ 0.97
TNRC18P3-201ENST00000441896 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
TNRC18P3-201ENST00000441896 SPDYE4A6NLX3 237 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 CCDC27Q2M243 656 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 ATF7IPQ6VMQ6 1270 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 MPNDQ8N594 471 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
TNRC18P3-201ENST00000441896 HMGN5P82970 282 aaKnown RBP21.1■□□□□ 0.97
TNRC18P3-201ENST00000441896 ANKRD36BQ8N2N9 1353 aa21.09■□□□□ 0.97
TNRC18P3-201ENST00000441896 NOB1Q9ULX3 412 aaKnown RBP21.09■□□□□ 0.97
TNRC18P3-201ENST00000441896 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.97
TNRC18P3-201ENST00000441896 IGSF3O75054 1194 aa21.08■□□□□ 0.97
TNRC18P3-201ENST00000441896 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.97
TNRC18P3-201ENST00000441896 ZNF830Q96NB3 372 aaPredicted RBP21.08■□□□□ 0.97
TNRC18P3-201ENST00000441896 CHMP4BQ9H444 224 aaKnown RBP21.08■□□□□ 0.97
TNRC18P3-201ENST00000441896 C17orf53Q8N3J3 647 aaPredicted RBP21.08■□□□□ 0.96
TNRC18P3-201ENST00000441896 CABP1Q9NZU7 370 aa21.08■□□□□ 0.96
TNRC18P3-201ENST00000441896 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
TNRC18P3-201ENST00000441896 ZDHHC9Q9Y397 364 aa21.07■□□□□ 0.96
TNRC18P3-201ENST00000441896 A0A1W2PP64 1363 aa21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 KCNA6P17658 529 aa21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 ANKRD45Q5TZF3 282 aa21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 ZGPATQ8N5A5 531 aaKnown RBP21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 PIBF1Q8WXW3 757 aa21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 KIF3AQ9Y496 699 aa21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 NOLC1Q14978 699 aaKnown RBP eCLIP21.06■□□□□ 0.96
TNRC18P3-201ENST00000441896 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
TNRC18P3-201ENST00000441896 RABEP1Q15276 862 aa21.05■□□□□ 0.96
TNRC18P3-201ENST00000441896 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
TNRC18P3-201ENST00000441896 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
TNRC18P3-201ENST00000441896 MORC1Q86VD1 984 aa21.04■□□□□ 0.96
TNRC18P3-201ENST00000441896 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 XRN1Q8IZH2 1706 aaKnown RBP21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 CT47B1P0C2W7 299 aaPredicted RBP21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 PDCL2Q8N4E4 241 aa21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
TNRC18P3-201ENST00000441896 U2AF2P26368 475 aaKnown RBP eCLIP21.02■□□□□ 0.96
TNRC18P3-201ENST00000441896 TSPY26PQ9H489 355 aa21.02■□□□□ 0.96
TNRC18P3-201ENST00000441896 CDC45O75419 566 aa21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 VGLL3A8MV65 326 aa21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 ZBTB22O15209 634 aa21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 CGNQ9P2M7 1197 aaKnown RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 HDGFL2Q7Z4V5 671 aaPredicted RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 TTC12Q9H892 705 aaPredicted RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 CWC22Q9HCG8 908 aaKnown RBP21.01■□□□□ 0.95
TNRC18P3-201ENST00000441896 NUTM2FA1L443 756 aa21■□□□□ 0.95
TNRC18P3-201ENST00000441896 PRR36Q9H6K5 1346 aa21■□□□□ 0.95
TNRC18P3-201ENST00000441896 PPIP5K1Q6PFW1 1433 aa20.99■□□□□ 0.95
TNRC18P3-201ENST00000441896 ADGRB2O60241 1585 aa20.99■□□□□ 0.95
TNRC18P3-201ENST00000441896 HSPA2P54652 639 aa20.99■□□□□ 0.95
TNRC18P3-201ENST00000441896 FKBP5Q13451 457 aaPredicted RBP20.99■□□□□ 0.95
TNRC18P3-201ENST00000441896 PDIA4P13667 645 aaKnown RBP20.98■□□□□ 0.95
TNRC18P3-201ENST00000441896 CCDC61Q9Y6R9 512 aa20.98■□□□□ 0.95
TNRC18P3-201ENST00000441896 MTHFSP49914 203 aa20.98■□□□□ 0.95
TNRC18P3-201ENST00000441896 USP32Q8NFA0 1604 aa20.98■□□□□ 0.95
TNRC18P3-201ENST00000441896 MBD3O95983 291 aa20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 IPO4Q8TEX9 1081 aaKnown RBP20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 C1orf115Q9H7X2 142 aa20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 GSPT1P15170 499 aaKnown RBP20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 TAF3Q5VWG9 929 aa20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 SPTLC3Q9NUV7 552 aa20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 ATP7BP35670 1465 aa20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
TNRC18P3-201ENST00000441896 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
TNRC18P3-201ENST00000441896 ZNF771Q7L3S4 317 aaPredicted RBP20.95■□□□□ 0.94
TNRC18P3-201ENST00000441896 ANKRD7Q92527 254 aa20.95■□□□□ 0.94
TNRC18P3-201ENST00000441896 GCC1Q96CN9 775 aa20.95■□□□□ 0.94
TNRC18P3-201ENST00000441896 U2AF1L5P0DN76 240 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms