RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
LINC01271-201ENST00000441214 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
LINC01271-201ENST00000441214 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
LINC01271-201ENST00000441214 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
LINC01271-201ENST00000441214 PTMSP20962 102 aa17.24■□□□□ 0.35
LINC01271-201ENST00000441214 YY1AP1Q9H869 796 aa17.24■□□□□ 0.35
LINC01271-201ENST00000441214 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
LINC01271-201ENST00000441214 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
LINC01271-201ENST00000441214 NSD2O96028 1365 aa17.24■□□□□ 0.35
LINC01271-201ENST00000441214 ANKRD26Q9UPS8 1709 aa17.24■□□□□ 0.35
LINC01271-201ENST00000441214 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 CGNQ9P2M7 1197 aaKnown RBP17.23■□□□□ 0.35
LINC01271-201ENST00000441214 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
LINC01271-201ENST00000441214 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
LINC01271-201ENST00000441214 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC01271-201ENST00000441214 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
LINC01271-201ENST00000441214 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
LINC01271-201ENST00000441214 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
LINC01271-201ENST00000441214 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
LINC01271-201ENST00000441214 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
LINC01271-201ENST00000441214 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.34
LINC01271-201ENST00000441214 POLKQ9UBT6 870 aa17.21■□□□□ 0.34
LINC01271-201ENST00000441214 DCCP43146 1447 aa17.2■□□□□ 0.34
LINC01271-201ENST00000441214 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
LINC01271-201ENST00000441214 MCM5P33992 734 aa17.2■□□□□ 0.34
LINC01271-201ENST00000441214 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
LINC01271-201ENST00000441214 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC01271-201ENST00000441214 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
LINC01271-201ENST00000441214 ARID3AQ99856 593 aa17.19■□□□□ 0.34
LINC01271-201ENST00000441214 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
LINC01271-201ENST00000441214 PSEN1P49768 467 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 TSPYL1Q9H0U9 437 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 OVOS2A0A0J9YW53 1432 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 OVOS2Q6IE36 1432 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 USP19O94966 1318 aa17.18■□□□□ 0.34
LINC01271-201ENST00000441214 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
LINC01271-201ENST00000441214 CBX1P83916 185 aa17.17■□□□□ 0.34
LINC01271-201ENST00000441214 GEMIN8Q9NWZ8 242 aaKnown RBP17.17■□□□□ 0.34
LINC01271-201ENST00000441214 ZBTB22O15209 634 aa17.17■□□□□ 0.34
LINC01271-201ENST00000441214 KCNG1Q9UIX4 513 aa17.16■□□□□ 0.34
LINC01271-201ENST00000441214 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
LINC01271-201ENST00000441214 VIRMAQ69YN4 1812 aaKnown RBP17.15■□□□□ 0.34
LINC01271-201ENST00000441214 CHMP5Q9NZZ3 219 aa17.15■□□□□ 0.34
LINC01271-201ENST00000441214 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
LINC01271-201ENST00000441214 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
LINC01271-201ENST00000441214 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
LINC01271-201ENST00000441214 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
LINC01271-201ENST00000441214 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
LINC01271-201ENST00000441214 E9PSI1 815 aa17.14■□□□□ 0.33
LINC01271-201ENST00000441214 MAP3K19Q56UN5 1328 aa17.13■□□□□ 0.33
LINC01271-201ENST00000441214 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
LINC01271-201ENST00000441214 APPP05067 770 aa17.13■□□□□ 0.33
LINC01271-201ENST00000441214 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
LINC01271-201ENST00000441214 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC01271-201ENST00000441214 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
LINC01271-201ENST00000441214 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
LINC01271-201ENST00000441214 KCNJ4P48050 445 aa17.12■□□□□ 0.33
LINC01271-201ENST00000441214 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
LINC01271-201ENST00000441214 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
LINC01271-201ENST00000441214 MYRIPQ8NFW9 859 aa17.12■□□□□ 0.33
LINC01271-201ENST00000441214 TRPM3Q9HCF6 1732 aaPredicted RBP17.12■□□□□ 0.33
LINC01271-201ENST00000441214 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
LINC01271-201ENST00000441214 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
LINC01271-201ENST00000441214 HMOX1P09601 288 aa17.1■□□□□ 0.33
LINC01271-201ENST00000441214 AMPHP49418 695 aa17.1■□□□□ 0.33
LINC01271-201ENST00000441214 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
LINC01271-201ENST00000441214 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
LINC01271-201ENST00000441214 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
LINC01271-201ENST00000441214 FAM193AP78312 1265 aa17.1■□□□□ 0.33
LINC01271-201ENST00000441214 PXDNQ92626 1479 aa17.1■□□□□ 0.33
LINC01271-201ENST00000441214 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC01271-201ENST00000441214 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
LINC01271-201ENST00000441214 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
LINC01271-201ENST00000441214 GAS2L3Q86XJ1 694 aa17.09■□□□□ 0.33
LINC01271-201ENST00000441214 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
LINC01271-201ENST00000441214 GABPB1Q06547 395 aaPredicted RBP17.09■□□□□ 0.33
LINC01271-201ENST00000441214 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
LINC01271-201ENST00000441214 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
LINC01271-201ENST00000441214 GCP02774 474 aa17.08■□□□□ 0.33
LINC01271-201ENST00000441214 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.33
LINC01271-201ENST00000441214 TIGD1Q96MW7 591 aa17.08■□□□□ 0.33
LINC01271-201ENST00000441214 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.33
LINC01271-201ENST00000441214 ROBO1Q9Y6N7 1651 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 AATKQ6ZMQ8 1374 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
LINC01271-201ENST00000441214 UBAP1LF5GYI3 381 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 TULP2O00295 520 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
LINC01271-201ENST00000441214 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
LINC01271-201ENST00000441214 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
LINC01271-201ENST00000441214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC01271-201ENST00000441214 EFCC1Q9HA90 598 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms