RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 PRIM1P49642 420 aaKnown RBP23.97■■□□□ 1.43
FAM20B-202ENST00000440702 SYT17Q9BSW7 474 aa23.97■■□□□ 1.43
FAM20B-202ENST00000440702 ZCRB1Q8TBF4 217 aaKnown RBP23.96■■□□□ 1.43
FAM20B-202ENST00000440702 FYB1O15117 783 aa23.95■■□□□ 1.42
FAM20B-202ENST00000440702 ARXQ96QS3 562 aa23.95■■□□□ 1.42
FAM20B-202ENST00000440702 QSER1Q2KHR3 1735 aa23.94■■□□□ 1.42
FAM20B-202ENST00000440702 AKT1S1Q96B36 256 aa23.94■■□□□ 1.42
FAM20B-202ENST00000440702 LY75O60449 1722 aa23.93■■□□□ 1.42
FAM20B-202ENST00000440702 SLC27A3Q5K4L6 730 aa23.93■■□□□ 1.42
FAM20B-202ENST00000440702 NBPF6Q5VWK0 638 aa23.93■■□□□ 1.42
FAM20B-202ENST00000440702 NBPF4Q96M43 638 aa23.93■■□□□ 1.42
FAM20B-202ENST00000440702 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
FAM20B-202ENST00000440702 NSD2O96028 1365 aa23.92■■□□□ 1.42
FAM20B-202ENST00000440702 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
FAM20B-202ENST00000440702 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
FAM20B-202ENST00000440702 TFCP2L1Q9NZI6 479 aa23.9■■□□□ 1.42
FAM20B-202ENST00000440702 PNPLA7Q6ZV29 1317 aa23.89■■□□□ 1.42
FAM20B-202ENST00000440702 RAPGEF4Q8WZA2 1011 aa23.89■■□□□ 1.41
FAM20B-202ENST00000440702 CHD4Q14839 1912 aa23.88■■□□□ 1.41
FAM20B-202ENST00000440702 HSP90AB2PQ58FF8 381 aa23.87■■□□□ 1.41
FAM20B-202ENST00000440702 CCNL1Q9UK58 526 aaPredicted RBP23.87■■□□□ 1.41
FAM20B-202ENST00000440702 TATP17735 454 aaPredicted RBP23.86■■□□□ 1.41
FAM20B-202ENST00000440702 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
FAM20B-202ENST00000440702 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
FAM20B-202ENST00000440702 INSRP06213 1382 aa23.85■■□□□ 1.41
FAM20B-202ENST00000440702 FLT4P35916 1363 aa23.85■■□□□ 1.41
FAM20B-202ENST00000440702 UTRNP46939 3433 aa23.85■■□□□ 1.41
FAM20B-202ENST00000440702 MAP3K5Q99683 1374 aa23.84■■□□□ 1.41
FAM20B-202ENST00000440702 POLD1P28340 1107 aa23.84■■□□□ 1.41
FAM20B-202ENST00000440702 COL24A1Q17RW2 1714 aa23.84■■□□□ 1.41
FAM20B-202ENST00000440702 MSH5O43196 834 aa23.83■■□□□ 1.41
FAM20B-202ENST00000440702 SLC16A10Q8TF71 515 aa23.83■■□□□ 1.41
FAM20B-202ENST00000440702 CARD14Q9BXL6 1004 aa23.83■■□□□ 1.41
FAM20B-202ENST00000440702 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
FAM20B-202ENST00000440702 ZNF784Q8NCA9 323 aaPredicted RBP23.82■■□□□ 1.4
FAM20B-202ENST00000440702 EMILIN1Q9Y6C2 1016 aa23.82■■□□□ 1.4
FAM20B-202ENST00000440702 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
FAM20B-202ENST00000440702 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
FAM20B-202ENST00000440702 C5P01031 1676 aa23.81■■□□□ 1.4
FAM20B-202ENST00000440702 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
FAM20B-202ENST00000440702 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
FAM20B-202ENST00000440702 GPR162Q16538 588 aa23.8■■□□□ 1.4
FAM20B-202ENST00000440702 TOGARAM1Q9Y4F4 1720 aa23.8■■□□□ 1.4
FAM20B-202ENST00000440702 ITGB4P16144 1822 aa23.79■■□□□ 1.4
FAM20B-202ENST00000440702 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
FAM20B-202ENST00000440702 PKD1L3Q7Z443 1732 aa23.77■■□□□ 1.4
FAM20B-202ENST00000440702 MSL1Q68DK7 614 aa23.77■■□□□ 1.4
FAM20B-202ENST00000440702 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
FAM20B-202ENST00000440702 MAP2P11137 1827 aaKnown RBP23.77■■□□□ 1.4
FAM20B-202ENST00000440702 KIF24Q5T7B8 1368 aa23.77■■□□□ 1.4
FAM20B-202ENST00000440702 CYP27B1O15528 508 aa23.76■■□□□ 1.39
FAM20B-202ENST00000440702 MPRIPQ6WCQ1 1025 aa23.76■■□□□ 1.39
FAM20B-202ENST00000440702 COL23A1Q86Y22 540 aaPredicted RBP23.76■■□□□ 1.39
FAM20B-202ENST00000440702 NLGN2Q8NFZ4 835 aa23.76■■□□□ 1.39
FAM20B-202ENST00000440702 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
FAM20B-202ENST00000440702 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
FAM20B-202ENST00000440702 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
FAM20B-202ENST00000440702 C4BP0C0L5 1744 aa23.7■■□□□ 1.38
FAM20B-202ENST00000440702 NCAPD2Q15021 1401 aa23.69■■□□□ 1.38
FAM20B-202ENST00000440702 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
FAM20B-202ENST00000440702 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
FAM20B-202ENST00000440702 PIGBQ92521 554 aa23.67■■□□□ 1.38
FAM20B-202ENST00000440702 EYA1Q99502 592 aa23.67■■□□□ 1.38
FAM20B-202ENST00000440702 SPG7Q9UQ90 795 aa23.67■■□□□ 1.38
FAM20B-202ENST00000440702 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
FAM20B-202ENST00000440702 SMIM5Q71RC9 77 aa23.66■■□□□ 1.38
FAM20B-202ENST00000440702 SMARCC1Q92922 1105 aaPredicted RBP23.66■■□□□ 1.38
FAM20B-202ENST00000440702 AK7Q96M32 723 aa23.66■■□□□ 1.38
FAM20B-202ENST00000440702 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
FAM20B-202ENST00000440702 PHF14O94880 888 aa23.65■■□□□ 1.38
FAM20B-202ENST00000440702 POLKQ9UBT6 870 aa23.65■■□□□ 1.38
FAM20B-202ENST00000440702 TIMELESSQ9UNS1 1208 aa23.65■■□□□ 1.38
FAM20B-202ENST00000440702 YBX3P16989 372 aaKnown RBP eCLIP23.64■■□□□ 1.374e-9■■■■□ 22.2
FAM20B-202ENST00000440702 AMIGO3Q86WK7 504 aa23.64■■□□□ 1.37
FAM20B-202ENST00000440702 FLAD1Q8NFF5 587 aa23.63■■□□□ 1.37
FAM20B-202ENST00000440702 NKX1-1Q15270 411 aaPredicted RBP23.62■■□□□ 1.37
FAM20B-202ENST00000440702 TMOD3Q9NYL9 352 aa23.61■■□□□ 1.37
FAM20B-202ENST00000440702 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
FAM20B-202ENST00000440702 LOC102724428A0A0B4J2F2 783 aa23.59■■□□□ 1.37
FAM20B-202ENST00000440702 SIK1P57059 783 aa23.59■■□□□ 1.37
FAM20B-202ENST00000440702 LINC00116Q8NCU8 138 aa23.59■■□□□ 1.37
FAM20B-202ENST00000440702 ASAP1Q9ULH1 1129 aa23.59■■□□□ 1.37
FAM20B-202ENST00000440702 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
FAM20B-202ENST00000440702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.58■■□□□ 1.37
FAM20B-202ENST00000440702 HSPA5P11021 654 aaKnown RBP23.58■■□□□ 1.37
FAM20B-202ENST00000440702 PHKG2P15735 406 aa23.58■■□□□ 1.37
FAM20B-202ENST00000440702 HMGB2P26583 209 aaKnown RBP23.58■■□□□ 1.37
FAM20B-202ENST00000440702 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
FAM20B-202ENST00000440702 SENP3-EIF4A1A0A087X0R7 540 aa23.57■■□□□ 1.36
FAM20B-202ENST00000440702 C1QTNF8P60827 252 aa23.57■■□□□ 1.36
FAM20B-202ENST00000440702 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
FAM20B-202ENST00000440702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.369e-6■□□□□ 9.4
FAM20B-202ENST00000440702 WWC3Q9ULE0 1092 aa23.56■■□□□ 1.36
FAM20B-202ENST00000440702 EIF4G2P78344 907 aaKnown RBP eCLIP23.55■■□□□ 1.36
FAM20B-202ENST00000440702 ITPK1Q13572 414 aa23.55■■□□□ 1.36
FAM20B-202ENST00000440702 CD2APQ9Y5K6 639 aa23.55■■□□□ 1.36
FAM20B-202ENST00000440702 GNPATO15228 680 aa23.54■■□□□ 1.36
FAM20B-202ENST00000440702 GIGYF1O75420 1035 aaPredicted RBP23.54■■□□□ 1.36
FAM20B-202ENST00000440702 ATP6V1AP38606 617 aa23.54■■□□□ 1.36
FAM20B-202ENST00000440702 PANK3Q9H999 370 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms