RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
ACTN4-204ENST00000440400 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 RLBP1P12271 317 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 AMPHP49418 695 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
ACTN4-204ENST00000440400 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
ACTN4-204ENST00000440400 PSME1Q06323 249 aa16.9■□□□□ 0.3
ACTN4-204ENST00000440400 ZKSCAN2Q63HK3 967 aa16.9■□□□□ 0.3
ACTN4-204ENST00000440400 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
ACTN4-204ENST00000440400 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.3
ACTN4-204ENST00000440400 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.3
ACTN4-204ENST00000440400 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
ACTN4-204ENST00000440400 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
ACTN4-204ENST00000440400 PKD1L3Q7Z443 1732 aa16.88■□□□□ 0.29
ACTN4-204ENST00000440400 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
ACTN4-204ENST00000440400 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
ACTN4-204ENST00000440400 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
ACTN4-204ENST00000440400 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
ACTN4-204ENST00000440400 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
ACTN4-204ENST00000440400 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
ACTN4-204ENST00000440400 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
ACTN4-204ENST00000440400 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 TRIM27P14373 513 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
ACTN4-204ENST00000440400 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
ACTN4-204ENST00000440400 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
ACTN4-204ENST00000440400 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-204ENST00000440400 RGS12O14924 1447 aa16.85■□□□□ 0.29
ACTN4-204ENST00000440400 FAM83GA6ND36 823 aa16.85■□□□□ 0.29
ACTN4-204ENST00000440400 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
ACTN4-204ENST00000440400 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
ACTN4-204ENST00000440400 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
ACTN4-204ENST00000440400 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
ACTN4-204ENST00000440400 CPDO75976 1380 aa16.85■□□□□ 0.29
ACTN4-204ENST00000440400 ABCC4O15439 1325 aa16.84■□□□□ 0.29
ACTN4-204ENST00000440400 GCP02774 474 aa16.84■□□□□ 0.29
ACTN4-204ENST00000440400 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
ACTN4-204ENST00000440400 ATF3P18847 181 aa16.83■□□□□ 0.28
ACTN4-204ENST00000440400 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
ACTN4-204ENST00000440400 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
ACTN4-204ENST00000440400 NOB1Q9ULX3 412 aaKnown RBP16.83■□□□□ 0.28
ACTN4-204ENST00000440400 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
ACTN4-204ENST00000440400 FOXO3O43524 673 aa16.83■□□□□ 0.28
ACTN4-204ENST00000440400 TSPYL6Q8N831 410 aa16.83■□□□□ 0.28
ACTN4-204ENST00000440400 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
ACTN4-204ENST00000440400 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
ACTN4-204ENST00000440400 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
ACTN4-204ENST00000440400 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
ACTN4-204ENST00000440400 HSPA2P54652 639 aa16.81■□□□□ 0.28
ACTN4-204ENST00000440400 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-204ENST00000440400 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
ACTN4-204ENST00000440400 TWISTNBQ3B726 338 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-204ENST00000440400 IGHDP01880 384 aa16.81■□□□□ 0.28
ACTN4-204ENST00000440400 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-204ENST00000440400 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
ACTN4-204ENST00000440400 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
ACTN4-204ENST00000440400 SPATA31A3Q5VYP0 1347 aa16.8■□□□□ 0.28
ACTN4-204ENST00000440400 SOX12O15370 315 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-204ENST00000440400 MRC1P22897 1456 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-204ENST00000440400 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 PCDHB15Q9Y5E8 787 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 MCM10Q7L590 875 aa16.79■□□□□ 0.28
ACTN4-204ENST00000440400 ZBTB40Q9NUA8 1239 aa16.78■□□□□ 0.28
ACTN4-204ENST00000440400 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
ACTN4-204ENST00000440400 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
ACTN4-204ENST00000440400 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
ACTN4-204ENST00000440400 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
ACTN4-204ENST00000440400 BACH2Q9BYV9 841 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
ACTN4-204ENST00000440400 ERBB3P21860 1342 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 PTPRCP08575 1304 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
ACTN4-204ENST00000440400 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
ACTN4-204ENST00000440400 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
ACTN4-204ENST00000440400 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
ACTN4-204ENST00000440400 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
ACTN4-204ENST00000440400 LTBP4Q8N2S1 1624 aa16.73■□□□□ 0.27
ACTN4-204ENST00000440400 ZBTB7BO15156 539 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-204ENST00000440400 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
ACTN4-204ENST00000440400 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-204ENST00000440400 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
ACTN4-204ENST00000440400 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
ACTN4-204ENST00000440400 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
ACTN4-204ENST00000440400 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
ACTN4-204ENST00000440400 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
ACTN4-204ENST00000440400 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-204ENST00000440400 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
ACTN4-204ENST00000440400 GLI3P10071 1580 aa16.71■□□□□ 0.27
ACTN4-204ENST00000440400 PDE4AP27815 886 aa16.71■□□□□ 0.26
ACTN4-204ENST00000440400 PLCH1Q4KWH8 1693 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms