RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
PDGFB-203ENST00000440375 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
PDGFB-203ENST00000440375 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
PDGFB-203ENST00000440375 NSD2O96028 1365 aa16.54■□□□□ 0.24
PDGFB-203ENST00000440375 CGNL1Q0VF96 1302 aa16.54■□□□□ 0.24
PDGFB-203ENST00000440375 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
PDGFB-203ENST00000440375 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
PDGFB-203ENST00000440375 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
PDGFB-203ENST00000440375 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.24
PDGFB-203ENST00000440375 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
PDGFB-203ENST00000440375 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
PDGFB-203ENST00000440375 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
PDGFB-203ENST00000440375 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
PDGFB-203ENST00000440375 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
PDGFB-203ENST00000440375 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
PDGFB-203ENST00000440375 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
PDGFB-203ENST00000440375 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
PDGFB-203ENST00000440375 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
PDGFB-203ENST00000440375 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
PDGFB-203ENST00000440375 KCNQ4P56696 695 aa16.49■□□□□ 0.23
PDGFB-203ENST00000440375 PANK3Q9H999 370 aa16.49■□□□□ 0.23
PDGFB-203ENST00000440375 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
PDGFB-203ENST00000440375 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
PDGFB-203ENST00000440375 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PDGFB-203ENST00000440375 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
PDGFB-203ENST00000440375 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
PDGFB-203ENST00000440375 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
PDGFB-203ENST00000440375 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
PDGFB-203ENST00000440375 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
PDGFB-203ENST00000440375 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
PDGFB-203ENST00000440375 CYP27B1O15528 508 aa16.46■□□□□ 0.23
PDGFB-203ENST00000440375 PTGER2P43116 358 aa16.46■□□□□ 0.23
PDGFB-203ENST00000440375 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-203ENST00000440375 LY75O60449 1722 aa16.45■□□□□ 0.22
PDGFB-203ENST00000440375 EYA1Q99502 592 aa16.45■□□□□ 0.22
PDGFB-203ENST00000440375 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
PDGFB-203ENST00000440375 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
PDGFB-203ENST00000440375 SLC27A3Q5K4L6 730 aa16.43■□□□□ 0.22
PDGFB-203ENST00000440375 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
PDGFB-203ENST00000440375 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
PDGFB-203ENST00000440375 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
PDGFB-203ENST00000440375 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
PDGFB-203ENST00000440375 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
PDGFB-203ENST00000440375 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
PDGFB-203ENST00000440375 CCNL1Q9UK58 526 aaPredicted RBP16.4■□□□□ 0.22
PDGFB-203ENST00000440375 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
PDGFB-203ENST00000440375 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
PDGFB-203ENST00000440375 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
PDGFB-203ENST00000440375 ITGB4P16144 1822 aa16.38■□□□□ 0.21
PDGFB-203ENST00000440375 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-203ENST00000440375 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
PDGFB-203ENST00000440375 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
PDGFB-203ENST00000440375 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
PDGFB-203ENST00000440375 C5P01031 1676 aa16.37■□□□□ 0.21
PDGFB-203ENST00000440375 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-203ENST00000440375 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-203ENST00000440375 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
PDGFB-203ENST00000440375 PHKG2P15735 406 aa16.35■□□□□ 0.21
PDGFB-203ENST00000440375 PIGBQ92521 554 aa16.35■□□□□ 0.21
PDGFB-203ENST00000440375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDGFB-203ENST00000440375 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
PDGFB-203ENST00000440375 UTRNP46939 3433 aa16.33■□□□□ 0.21
PDGFB-203ENST00000440375 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.21
PDGFB-203ENST00000440375 ARXQ96QS3 562 aa16.33■□□□□ 0.2
PDGFB-203ENST00000440375 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
PDGFB-203ENST00000440375 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
PDGFB-203ENST00000440375 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
PDGFB-203ENST00000440375 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
PDGFB-203ENST00000440375 PLEKHG2Q9H7P9 1386 aa16.31■□□□□ 0.2
PDGFB-203ENST00000440375 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
PDGFB-203ENST00000440375 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-203ENST00000440375 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
PDGFB-203ENST00000440375 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-203ENST00000440375 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-203ENST00000440375 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-203ENST00000440375 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
PDGFB-203ENST00000440375 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
PDGFB-203ENST00000440375 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
PDGFB-203ENST00000440375 IL13P35225 146 aa16.29■□□□□ 0.2
PDGFB-203ENST00000440375 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
PDGFB-203ENST00000440375 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
PDGFB-203ENST00000440375 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
PDGFB-203ENST00000440375 MSH5O43196 834 aa16.28■□□□□ 0.2
PDGFB-203ENST00000440375 SIK1P57059 783 aa16.28■□□□□ 0.2
PDGFB-203ENST00000440375 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
PDGFB-203ENST00000440375 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
PDGFB-203ENST00000440375 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-203ENST00000440375 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
PDGFB-203ENST00000440375 KDRP35968 1356 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 YY1P25490 414 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 POLD1P28340 1107 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 ITPK1Q13572 414 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
PDGFB-203ENST00000440375 MTHFSP49914 203 aa16.26■□□□□ 0.19
PDGFB-203ENST00000440375 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-203ENST00000440375 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
PDGFB-203ENST00000440375 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
PDGFB-203ENST00000440375 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-203ENST00000440375 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms