RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CARD14Q9BXL6 1004 aa28.83■■■□□ 2.21
CPNE1-219ENST00000440240 KIF24Q5T7B8 1368 aa28.83■■■□□ 2.21
CPNE1-219ENST00000440240 HSP90AB2PQ58FF8 381 aa28.82■■■□□ 2.2
CPNE1-219ENST00000440240 INSRP06213 1382 aa28.82■■■□□ 2.2
CPNE1-219ENST00000440240 ZNF827Q17R98 1081 aa28.81■■■□□ 2.2
CPNE1-219ENST00000440240 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
CPNE1-219ENST00000440240 MEGF6O75095 1541 aa28.8■■■□□ 2.2
CPNE1-219ENST00000440240 TATP17735 454 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-219ENST00000440240 USHBP1Q8N6Y0 703 aa28.8■■■□□ 2.2
CPNE1-219ENST00000440240 AKT1S1Q96B36 256 aa28.8■■■□□ 2.2
CPNE1-219ENST00000440240 SGIP1Q9BQI5 828 aa28.8■■■□□ 2.2
CPNE1-219ENST00000440240 FLT4P35916 1363 aa28.79■■■□□ 2.2
CPNE1-219ENST00000440240 SYT17Q9BSW7 474 aa28.78■■■□□ 2.2
CPNE1-219ENST00000440240 FHDC1Q9C0D6 1143 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-219ENST00000440240 PAPPAQ13219 1627 aa28.78■■■□□ 2.2
CPNE1-219ENST00000440240 SLC16A10Q8TF71 515 aa28.77■■■□□ 2.2
CPNE1-219ENST00000440240 RGPD2P0DJD1 1756 aa28.76■■■□□ 2.19
CPNE1-219ENST00000440240 ARXQ96QS3 562 aa28.76■■■□□ 2.19
CPNE1-219ENST00000440240 NSD3Q9BZ95 1437 aa28.75■■■□□ 2.19
CPNE1-219ENST00000440240 TFCP2L1Q9NZI6 479 aa28.74■■■□□ 2.19
CPNE1-219ENST00000440240 MYOM1P52179 1685 aa28.74■■■□□ 2.19
CPNE1-219ENST00000440240 NSD2O96028 1365 aa28.73■■■□□ 2.19
CPNE1-219ENST00000440240 PCDH11XQ9BZA7 1347 aa28.72■■■□□ 2.19
CPNE1-219ENST00000440240 PCDH11YQ9BZA8 1340 aa28.72■■■□□ 2.19
CPNE1-219ENST00000440240 EMILIN1Q9Y6C2 1016 aa28.72■■■□□ 2.19
CPNE1-219ENST00000440240 KIF20BQ96Q89 1820 aa28.71■■■□□ 2.19
CPNE1-219ENST00000440240 HMGB2P26583 209 aaKnown RBP28.71■■■□□ 2.19
CPNE1-219ENST00000440240 KCNQ4P56696 695 aa28.71■■■□□ 2.19
CPNE1-219ENST00000440240 CCNL1Q9UK58 526 aaPredicted RBP28.71■■■□□ 2.19
CPNE1-219ENST00000440240 PPM1GO15355 546 aaPredicted RBP28.7■■■□□ 2.18
CPNE1-219ENST00000440240 PNPLA7Q6ZV29 1317 aa28.69■■■□□ 2.18
CPNE1-219ENST00000440240 POLD1P28340 1107 aa28.68■■■□□ 2.18
CPNE1-219ENST00000440240 DOT1LQ8TEK3 1739 aa28.68■■■□□ 2.18
CPNE1-219ENST00000440240 SHANK3Q9BYB0 1731 aa28.68■■■□□ 2.18
CPNE1-219ENST00000440240 WASHC2AQ641Q2 1341 aa28.67■■■□□ 2.18
CPNE1-219ENST00000440240 POLR3GLQ9BT43 218 aa28.66■■■□□ 2.18
CPNE1-219ENST00000440240 MAP3K5Q99683 1374 aa28.65■■■□□ 2.18
CPNE1-219ENST00000440240 CYP27B1O15528 508 aa28.64■■■□□ 2.18
CPNE1-219ENST00000440240 EIF4G2P78344 907 aaKnown RBP eCLIP28.64■■■□□ 2.18
CPNE1-219ENST00000440240 MPRIPQ6WCQ1 1025 aa28.63■■■□□ 2.17
CPNE1-219ENST00000440240 LY75O60449 1722 aa28.63■■■□□ 2.17
CPNE1-219ENST00000440240 UTRNP46939 3433 aa28.62■■■□□ 2.17
CPNE1-219ENST00000440240 SPG7Q9UQ90 795 aa28.62■■■□□ 2.17
CPNE1-219ENST00000440240 POLKQ9UBT6 870 aa28.61■■■□□ 2.17
CPNE1-219ENST00000440240 QSER1Q2KHR3 1735 aa28.6■■■□□ 2.17
CPNE1-219ENST00000440240 SMARCC1Q92922 1105 aaPredicted RBP28.59■■■□□ 2.17
CPNE1-219ENST00000440240 EYA1Q99502 592 aa28.59■■■□□ 2.17
CPNE1-219ENST00000440240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.59■■■□□ 2.171e-6■■□□□ 12.2
CPNE1-219ENST00000440240 MSH5O43196 834 aa28.58■■■□□ 2.17
CPNE1-219ENST00000440240 NKX1-1Q15270 411 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-219ENST00000440240 NCAPD2Q15021 1401 aa28.58■■■□□ 2.17
CPNE1-219ENST00000440240 HSPA5P11021 654 aaKnown RBP28.56■■■□□ 2.16
CPNE1-219ENST00000440240 COL23A1Q86Y22 540 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-219ENST00000440240 PALLDQ8WX93 1383 aa28.56■■■□□ 2.16
CPNE1-219ENST00000440240 KLHL34Q8N239 644 aa28.55■■■□□ 2.16
CPNE1-219ENST00000440240 FLAD1Q8NFF5 587 aa28.55■■■□□ 2.16
CPNE1-219ENST00000440240 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-219ENST00000440240 TNNT2P45379 298 aaPredicted RBP28.54■■■□□ 2.16
CPNE1-219ENST00000440240 GPR162Q16538 588 aa28.53■■■□□ 2.16
CPNE1-219ENST00000440240 PIGBQ92521 554 aa28.53■■■□□ 2.16
CPNE1-219ENST00000440240 PANK3Q9H999 370 aa28.53■■■□□ 2.16
CPNE1-219ENST00000440240 MAP2P11137 1827 aaKnown RBP28.53■■■□□ 2.16
CPNE1-219ENST00000440240 ANKRD26Q9UPS8 1709 aa28.52■■■□□ 2.16
CPNE1-219ENST00000440240 IFNL2Q8IZJ0 200 aa28.51■■■□□ 2.15
CPNE1-219ENST00000440240 EIF4A2Q14240 407 aaKnown RBP28.5■■■□□ 2.15
CPNE1-219ENST00000440240 COL24A1Q17RW2 1714 aa28.49■■■□□ 2.15
CPNE1-219ENST00000440240 TUBGCP6Q96RT7 1819 aa28.49■■■□□ 2.15
CPNE1-219ENST00000440240 PKD1L3Q7Z443 1732 aa28.49■■■□□ 2.15
CPNE1-219ENST00000440240 PHKG2P15735 406 aa28.47■■■□□ 2.15
CPNE1-219ENST00000440240 ZNF784Q8NCA9 323 aaPredicted RBP28.47■■■□□ 2.15
CPNE1-219ENST00000440240 TMOD3Q9NYL9 352 aa28.47■■■□□ 2.15
CPNE1-219ENST00000440240 AK7Q96M32 723 aa28.46■■■□□ 2.15
CPNE1-219ENST00000440240 PLEKHG2Q9H7P9 1386 aa28.46■■■□□ 2.15
CPNE1-219ENST00000440240 C5P01031 1676 aa28.44■■■□□ 2.14
CPNE1-219ENST00000440240 LOC102724428A0A0B4J2F2 783 aa28.43■■■□□ 2.14
CPNE1-219ENST00000440240 SIK1P57059 783 aa28.43■■■□□ 2.14
CPNE1-219ENST00000440240 MSL1Q68DK7 614 aa28.43■■■□□ 2.14
CPNE1-219ENST00000440240 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
CPNE1-219ENST00000440240 NLGN2Q8NFZ4 835 aa28.43■■■□□ 2.14
CPNE1-219ENST00000440240 ITGB4P16144 1822 aa28.43■■■□□ 2.14
CPNE1-219ENST00000440240 IGSF1Q8N6C5 1336 aa28.42■■■□□ 2.14
CPNE1-219ENST00000440240 TOGARAM1Q9Y4F4 1720 aa28.41■■■□□ 2.14
CPNE1-219ENST00000440240 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
CPNE1-219ENST00000440240 CHD4Q14839 1912 aa28.4■■■□□ 2.14
CPNE1-219ENST00000440240 ASAP1Q9ULH1 1129 aa28.4■■■□□ 2.14
CPNE1-219ENST00000440240 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
CPNE1-219ENST00000440240 KNSTRNQ9Y448 316 aa28.39■■■□□ 2.14
CPNE1-219ENST00000440240 TAF1LQ8IZX4 1826 aa28.39■■■□□ 2.13
CPNE1-219ENST00000440240 GRIN3BO60391 1043 aa28.38■■■□□ 2.13
CPNE1-219ENST00000440240 HSP90AB1P08238 724 aaKnown RBP28.38■■■□□ 2.13
CPNE1-219ENST00000440240 PLEKHO1Q53GL0 409 aaPredicted RBP28.38■■■□□ 2.13
CPNE1-219ENST00000440240 CD2APQ9Y5K6 639 aa28.38■■■□□ 2.13
CPNE1-219ENST00000440240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.37■■■□□ 2.13
CPNE1-219ENST00000440240 ERVV-2B6SEH9 535 aa28.37■■■□□ 2.13
CPNE1-219ENST00000440240 SSFA2P28290 1259 aa28.37■■■□□ 2.13
CPNE1-219ENST00000440240 ATP6V1AP38606 617 aa28.37■■■□□ 2.13
CPNE1-219ENST00000440240 AMOTQ4VCS5 1084 aa28.37■■■□□ 2.13
CPNE1-219ENST00000440240 C4BP0C0L5 1744 aa28.37■■■□□ 2.13
CPNE1-219ENST00000440240 PHF14O94880 888 aa28.36■■■□□ 2.13
CPNE1-219ENST00000440240 LINC00116Q8NCU8 138 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms