RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
HERPUD1-204ENST00000439977 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
HERPUD1-204ENST00000439977 MTHFSDQ2M296 383 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-204ENST00000439977 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
HERPUD1-204ENST00000439977 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
HERPUD1-204ENST00000439977 SDSP20132 328 aa16.79■□□□□ 0.28
HERPUD1-204ENST00000439977 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
HERPUD1-204ENST00000439977 MAP3K19Q56UN5 1328 aa16.79■□□□□ 0.28
HERPUD1-204ENST00000439977 NCOA3Q9Y6Q9 1424 aa16.78■□□□□ 0.28
HERPUD1-204ENST00000439977 RTF1Q92541 710 aaKnown RBP16.77■□□□□ 0.28
HERPUD1-204ENST00000439977 GAS2L3Q86XJ1 694 aa16.77■□□□□ 0.27
HERPUD1-204ENST00000439977 NRXN3Q9Y4C0 1643 aa16.77■□□□□ 0.27
HERPUD1-204ENST00000439977 NGDNQ8NEJ9 315 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 TNRQ92752 1358 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 AMPHP49418 695 aa16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-204ENST00000439977 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 RGS12O14924 1447 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 PKP1Q13835 747 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
HERPUD1-204ENST00000439977 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
HERPUD1-204ENST00000439977 AGLP35573 1532 aa16.74■□□□□ 0.27
HERPUD1-204ENST00000439977 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
HERPUD1-204ENST00000439977 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
HERPUD1-204ENST00000439977 EYA1Q99502 592 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 CIZ1Q9ULV3 898 aaPredicted RBP16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 MRE11P49959 708 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
HERPUD1-204ENST00000439977 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 ZGPATQ8N5A5 531 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 PTPRCP08575 1304 aa16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 USP6P35125 1406 aa16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-204ENST00000439977 NLRP6P59044 892 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 RABEP1Q15276 862 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 TECPR2O15040 1411 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 CRB1P82279 1406 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
HERPUD1-204ENST00000439977 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 NOL8Q76FK4 1167 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
HERPUD1-204ENST00000439977 PNMA6EA0A0J9YXQ4 647 aa16.68■□□□□ 0.26
HERPUD1-204ENST00000439977 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
HERPUD1-204ENST00000439977 HMMRO75330 724 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 C3P01024 1663 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 PDE1AP54750 535 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 PTPRUQ92729 1446 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
HERPUD1-204ENST00000439977 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
HERPUD1-204ENST00000439977 GNAI2P04899 355 aa16.66■□□□□ 0.26
HERPUD1-204ENST00000439977 FLIIQ13045 1269 aa16.66■□□□□ 0.26
HERPUD1-204ENST00000439977 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
HERPUD1-204ENST00000439977 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
HERPUD1-204ENST00000439977 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-204ENST00000439977 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-204ENST00000439977 REREQ9P2R6 1566 aa16.64■□□□□ 0.26
HERPUD1-204ENST00000439977 ERC2O15083 957 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 ST18O60284 1047 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 REC8O95072 547 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 NEK4P51957 841 aa16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-204ENST00000439977 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 FLT4P35916 1363 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 CAVIN1Q6NZI2 390 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 ABTB2Q8N961 1025 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-204ENST00000439977 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms