RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CEP350Q5VT06 3117 aa6.26□□□□□ -1.41
EDEM3-203ENST00000439962 COL22A1Q8NFW1 1626 aaPredicted RBP6.26□□□□□ -1.41
EDEM3-203ENST00000439962 BRWD3Q6RI45 1802 aa6.26□□□□□ -1.41
EDEM3-203ENST00000439962 NEUROD2Q15784 382 aa6.26□□□□□ -1.41
EDEM3-203ENST00000439962 ZCRB1Q8TBF4 217 aaKnown RBP6.26□□□□□ -1.41
EDEM3-203ENST00000439962 PUS7Q96PZ0 661 aaKnown RBP6.26□□□□□ -1.41
EDEM3-203ENST00000439962 ABCA3Q99758 1704 aa6.26□□□□□ -1.41
EDEM3-203ENST00000439962 PHRF1Q9P1Y6 1649 aaKnown RBP6.26□□□□□ -1.41
EDEM3-203ENST00000439962 OVOS2A0A0J9YW53 1432 aa6.25□□□□□ -1.41
EDEM3-203ENST00000439962 OVOS2Q6IE36 1432 aa6.25□□□□□ -1.41
EDEM3-203ENST00000439962 TATP17735 454 aaPredicted RBP6.25□□□□□ -1.41
EDEM3-203ENST00000439962 AMER1Q5JTC6 1135 aaPredicted RBP6.25□□□□□ -1.41
EDEM3-203ENST00000439962 SALL2Q9Y467 1007 aaPredicted RBP6.25□□□□□ -1.41
EDEM3-203ENST00000439962 CCDC184Q52MB2 194 aa6.25□□□□□ -1.41
EDEM3-203ENST00000439962 ARXQ96QS3 562 aa6.25□□□□□ -1.41
EDEM3-203ENST00000439962 MARF1Q9Y4F3 1742 aaKnown RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 ONECUT3O60422 494 aaPredicted RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 ZBTB7AO95365 584 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 BARGINQ6ZT62 677 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 COL14A1Q05707 1796 aaKnown RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 PHF14O94880 888 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 U2AF1L5P0DN76 240 aaPredicted RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 U2AF1Q01081 240 aaKnown RBP eCLIP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 FAM9BQ8IZU0 186 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 ATF5Q9Y2D1 282 aaPredicted RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
EDEM3-203ENST00000439962 FLT4P35916 1363 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 NINLQ9Y2I6 1382 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 AKAP12Q02952 1782 aa6.24□□□□□ -1.41
EDEM3-203ENST00000439962 USP31Q70CQ4 1352 aa6.23□□□□□ -1.41
EDEM3-203ENST00000439962 LTN1O94822 1766 aa6.23□□□□□ -1.41
EDEM3-203ENST00000439962 CDK12Q9NYV4 1490 aaPredicted RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 NFAT5O94916 1531 aa6.23□□□□□ -1.41
EDEM3-203ENST00000439962 CYP27B1O15528 508 aa6.23□□□□□ -1.41
EDEM3-203ENST00000439962 ZNF530Q6P9A1 599 aaPredicted RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 RBM42Q9BTD8 480 aaKnown RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 THRAP3Q9Y2W1 955 aaKnown RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 NCBP3Q53F19 620 aaKnown RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
EDEM3-203ENST00000439962 ANO8Q9HCE9 1232 aaPredicted RBP6.23□□□□□ -1.41
EDEM3-203ENST00000439962 MON2Q7Z3U7 1717 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 DIAPH1O60610 1272 aaKnown RBP6.22□□□□□ -1.41
EDEM3-203ENST00000439962 DCTN1Q14203 1278 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 MSL1Q68DK7 614 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 CCDC146Q8IYE0 955 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 MEGF6O75095 1541 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 RGPD2P0DJD1 1756 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 SLC39A6Q13433 755 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 PROM2Q8N271 834 aa6.22□□□□□ -1.41
EDEM3-203ENST00000439962 RRP7AQ9Y3A4 280 aaKnown RBP6.22□□□□□ -1.41
EDEM3-203ENST00000439962 MAP2P11137 1827 aaKnown RBP6.22□□□□□ -1.41
EDEM3-203ENST00000439962 SLIT3O75094 1523 aa6.21□□□□□ -1.41
EDEM3-203ENST00000439962 TXNRD1Q16881 649 aa6.21□□□□□ -1.41
EDEM3-203ENST00000439962 ASAP1Q9ULH1 1129 aa6.21□□□□□ -1.41
EDEM3-203ENST00000439962 ANKRD26Q9UPS8 1709 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 OVOS2A0A0G2JMS6 1433 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 C1orf141Q5JVX7 400 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 LRRC4BQ9NT99 713 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 TFCP2L1Q9NZI6 479 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 RBM19Q9Y4C8 960 aaKnown RBP6.21□□□□□ -1.42
EDEM3-203ENST00000439962 NRAPQ86VF7 1730 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 CRYBG1Q9Y4K1 1723 aa6.21□□□□□ -1.42
EDEM3-203ENST00000439962 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
EDEM3-203ENST00000439962 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 CAMKK2Q96RR4 588 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 LGR6Q9HBX8 967 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 MIS18AQ9NYP9 233 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 PPP2R1AP30153 589 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 PRKAR2BP31323 418 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 PHACTR3Q96KR7 559 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 THUMPD2Q9BTF0 503 aaKnown RBP6.2□□□□□ -1.42
EDEM3-203ENST00000439962 CCNL1Q9UK58 526 aaPredicted RBP6.2□□□□□ -1.42
EDEM3-203ENST00000439962 NWD2Q9ULI1 1742 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 NSD2O96028 1365 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 TMOD3Q9NYL9 352 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 SPG7Q9UQ90 795 aa6.2□□□□□ -1.42
EDEM3-203ENST00000439962 LMO7Q8WWI1 1683 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 IL13P35225 146 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 CABP4P57796 275 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 NBPF14Q5TI25 921 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 MCM10Q7L590 875 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 PIGBQ92521 554 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 CFAP53Q96M91 514 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 ANP32EQ9BTT0 268 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
EDEM3-203ENST00000439962 LAS1LQ9Y4W2 734 aaKnown RBP6.19□□□□□ -1.42
EDEM3-203ENST00000439962 MTHFSDQ2M296 383 aaKnown RBP6.19□□□□□ -1.42
EDEM3-203ENST00000439962 CCDC125Q86Z20 511 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 PEAK1Q9H792 1746 aa6.19□□□□□ -1.42
EDEM3-203ENST00000439962 PCDH11XQ9BZA7 1347 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 PCDH11YQ9BZA8 1340 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 ATP6V1AP38606 617 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 PLEKHO1Q53GL0 409 aaPredicted RBP6.18□□□□□ -1.42
EDEM3-203ENST00000439962 IFNL2Q8IZJ0 200 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 COL18A1P39060 1754 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 PHKG2P15735 406 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 ZNF827Q17R98 1081 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 NECTIN2Q92692 538 aa6.18□□□□□ -1.42
EDEM3-203ENST00000439962 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms