RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 BCL9O00512 1426 aa15.82■□□□□ 0.12
AC009404.1-202ENST00000439955 CHD4Q14839 1912 aa15.82■□□□□ 0.12
AC009404.1-202ENST00000439955 EXOC5O00471 708 aa15.81■□□□□ 0.12
AC009404.1-202ENST00000439955 ZNF827Q17R98 1081 aa15.81■□□□□ 0.12
AC009404.1-202ENST00000439955 MAP3K5Q99683 1374 aa15.81■□□□□ 0.12
AC009404.1-202ENST00000439955 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
AC009404.1-202ENST00000439955 MRS2Q9HD23 443 aa15.8■□□□□ 0.12
AC009404.1-202ENST00000439955 USP54Q70EL1 1684 aa15.79■□□□□ 0.12
AC009404.1-202ENST00000439955 TTC21AQ8NDW8 1320 aa15.79■□□□□ 0.12
AC009404.1-202ENST00000439955 FYB1O15117 783 aa15.79■□□□□ 0.12
AC009404.1-202ENST00000439955 SLIT3O75094 1523 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 PPP2R1AP30153 589 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 NLGN2Q8NFZ4 835 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 CARD10Q9BWT7 1032 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 WNK3Q9BYP7 1800 aa15.78■□□□□ 0.12
AC009404.1-202ENST00000439955 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
AC009404.1-202ENST00000439955 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
AC009404.1-202ENST00000439955 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.12
AC009404.1-202ENST00000439955 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.11
AC009404.1-202ENST00000439955 COL18A1P39060 1754 aa15.76■□□□□ 0.11
AC009404.1-202ENST00000439955 GOLGB1Q14789 3259 aaKnown RBP15.76■□□□□ 0.11
AC009404.1-202ENST00000439955 POLD1P28340 1107 aa15.75■□□□□ 0.11
AC009404.1-202ENST00000439955 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
AC009404.1-202ENST00000439955 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
AC009404.1-202ENST00000439955 PAPPAQ13219 1627 aa15.75■□□□□ 0.11
AC009404.1-202ENST00000439955 PIK3C2AO00443 1686 aa15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 YBX3P16989 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 GGNBP2Q9H3C7 697 aa15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 TNS2Q63HR2 1409 aa15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 INSRP06213 1382 aa15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
AC009404.1-202ENST00000439955 KCNQ4P56696 695 aa15.73■□□□□ 0.11
AC009404.1-202ENST00000439955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
AC009404.1-202ENST00000439955 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
AC009404.1-202ENST00000439955 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
AC009404.1-202ENST00000439955 PNPLA7Q6ZV29 1317 aa15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 NME9Q86XW9 330 aa15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 ZNF526Q8TF50 670 aaPredicted RBP15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 COG3Q96JB2 828 aa15.71■□□□□ 0.11
AC009404.1-202ENST00000439955 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
AC009404.1-202ENST00000439955 KCNH5Q8NCM2 988 aa15.7■□□□□ 0.1
AC009404.1-202ENST00000439955 TFCP2L1Q9NZI6 479 aa15.7■□□□□ 0.1
AC009404.1-202ENST00000439955 SLC16A10Q8TF71 515 aa15.69■□□□□ 0.1
AC009404.1-202ENST00000439955 NLRP2Q9NX02 1062 aa15.69■□□□□ 0.1
AC009404.1-202ENST00000439955 RGPD5Q99666 1765 aa15.69■□□□□ 0.1
AC009404.1-202ENST00000439955 GRIN3BO60391 1043 aa15.67■□□□□ 0.1
AC009404.1-202ENST00000439955 HSPA6P17066 643 aa15.67■□□□□ 0.1
AC009404.1-202ENST00000439955 CFAP53Q96M91 514 aa15.67■□□□□ 0.1
AC009404.1-202ENST00000439955 GPBP1L1Q9HC44 474 aaPredicted RBP15.67■□□□□ 0.1
AC009404.1-202ENST00000439955 ABCC6O95255 1503 aa15.67■□□□□ 0.1
AC009404.1-202ENST00000439955 BTAF1O14981 1849 aa15.66■□□□□ 0.1
AC009404.1-202ENST00000439955 IL2RBP14784 551 aa15.66■□□□□ 0.1
AC009404.1-202ENST00000439955 MTHFSP49914 203 aa15.66■□□□□ 0.1
AC009404.1-202ENST00000439955 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
AC009404.1-202ENST00000439955 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
AC009404.1-202ENST00000439955 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
AC009404.1-202ENST00000439955 FAM9BQ8IZU0 186 aa15.65■□□□□ 0.1
AC009404.1-202ENST00000439955 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
AC009404.1-202ENST00000439955 NFAT5O94916 1531 aa15.64■□□□□ 0.09
AC009404.1-202ENST00000439955 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
AC009404.1-202ENST00000439955 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
AC009404.1-202ENST00000439955 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
AC009404.1-202ENST00000439955 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
AC009404.1-202ENST00000439955 ERBB3P21860 1342 aa15.63■□□□□ 0.09
AC009404.1-202ENST00000439955 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
AC009404.1-202ENST00000439955 WDR43Q15061 677 aaKnown RBP eCLIP15.62■□□□□ 0.09
AC009404.1-202ENST00000439955 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
AC009404.1-202ENST00000439955 WWC3Q9ULE0 1092 aa15.62■□□□□ 0.09
AC009404.1-202ENST00000439955 NPM3O75607 178 aaKnown RBP15.61■□□□□ 0.09
AC009404.1-202ENST00000439955 ANKRD24Q8TF21 1146 aa15.61■□□□□ 0.09
AC009404.1-202ENST00000439955 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
AC009404.1-202ENST00000439955 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
AC009404.1-202ENST00000439955 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
AC009404.1-202ENST00000439955 COL24A1Q17RW2 1714 aa15.59■□□□□ 0.09
AC009404.1-202ENST00000439955 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
AC009404.1-202ENST00000439955 ADCY9O60503 1353 aa15.58■□□□□ 0.08
AC009404.1-202ENST00000439955 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
AC009404.1-202ENST00000439955 CCNL1Q9UK58 526 aaPredicted RBP15.57■□□□□ 0.08
AC009404.1-202ENST00000439955 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
AC009404.1-202ENST00000439955 FLT4P35916 1363 aa15.57■□□□□ 0.08
AC009404.1-202ENST00000439955 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
AC009404.1-202ENST00000439955 DIAPH1O60610 1272 aaKnown RBP15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 ADAMTS8Q9UP79 889 aa15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 EMILIN1Q9Y6C2 1016 aa15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 LTN1O94822 1766 aa15.56■□□□□ 0.08
AC009404.1-202ENST00000439955 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
AC009404.1-202ENST00000439955 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
AC009404.1-202ENST00000439955 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
AC009404.1-202ENST00000439955 KIF3CO14782 793 aa15.54■□□□□ 0.08
AC009404.1-202ENST00000439955 CAPN15O75808 1086 aa15.53■□□□□ 0.08
AC009404.1-202ENST00000439955 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
AC009404.1-202ENST00000439955 FBLN1P23142 703 aa15.52■□□□□ 0.08
AC009404.1-202ENST00000439955 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms