RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 VAMP4O75379 141 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 FAM193AP78312 1265 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 ATP2B3Q16720 1220 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 MRPL50Q8N5N7 158 aaKnown RBP14.11□□□□□ -0.15
SMPD4-209ENST00000439886 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 NPHP1O15259 732 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 GIMAP6Q6P9H5 292 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
SMPD4-209ENST00000439886 GNAI1P63096 354 aa14.1□□□□□ -0.15
SMPD4-209ENST00000439886 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
SMPD4-209ENST00000439886 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
SMPD4-209ENST00000439886 ABCC11Q96J66 1382 aa14.1□□□□□ -0.15
SMPD4-209ENST00000439886 PTPRTO14522 1441 aa14.1□□□□□ -0.15
SMPD4-209ENST00000439886 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
SMPD4-209ENST00000439886 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
SMPD4-209ENST00000439886 CNPY2Q9Y2B0 182 aa14.09□□□□□ -0.15
SMPD4-209ENST00000439886 DDX54Q8TDD1 881 aaKnown RBP14.09□□□□□ -0.15
SMPD4-209ENST00000439886 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-209ENST00000439886 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.15
SMPD4-209ENST00000439886 NOS1P29475 1434 aa14.08□□□□□ -0.16
SMPD4-209ENST00000439886 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.16
SMPD4-209ENST00000439886 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.16
SMPD4-209ENST00000439886 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
SMPD4-209ENST00000439886 SAMD9LQ8IVG5 1584 aa14.07□□□□□ -0.16
SMPD4-209ENST00000439886 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
SMPD4-209ENST00000439886 MIS18AQ9NYP9 233 aa14.07□□□□□ -0.16
SMPD4-209ENST00000439886 RIOK3O14730 519 aaKnown RBP14.07□□□□□ -0.16
SMPD4-209ENST00000439886 MEIS3Q99687 375 aa14.07□□□□□ -0.16
SMPD4-209ENST00000439886 DIAPH3Q9NSV4 1193 aa14.07□□□□□ -0.16
SMPD4-209ENST00000439886 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
SMPD4-209ENST00000439886 CAMK4Q16566 473 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 PRIMPOLQ96LW4 560 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 F6X3S4 739 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 FYB1O15117 783 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
SMPD4-209ENST00000439886 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 ERICH4A6NGS2 130 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 PALD1Q9ULE6 856 aa14.06□□□□□ -0.16
SMPD4-209ENST00000439886 CLGNO14967 610 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 DCTPP1Q9H773 170 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 TRAPPC8Q9Y2L5 1435 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 HMMRO75330 724 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 CYP2E1P05181 493 aaPredicted RBP14.05□□□□□ -0.16
SMPD4-209ENST00000439886 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 CHD1O14646 1710 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
SMPD4-209ENST00000439886 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMPD4-209ENST00000439886 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
SMPD4-209ENST00000439886 UGGT1Q9NYU2 1555 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-209ENST00000439886 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
SMPD4-209ENST00000439886 IL1RAPL2Q9NP60 686 aa14.04□□□□□ -0.16
SMPD4-209ENST00000439886 FCHSD2O94868 740 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 FERMT3Q86UX7 667 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 FBXW7Q969H0 707 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 PYCARDQ9ULZ3 195 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
SMPD4-209ENST00000439886 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
SMPD4-209ENST00000439886 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
SMPD4-209ENST00000439886 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
SMPD4-209ENST00000439886 IL16Q14005 1332 aa14.02□□□□□ -0.16
SMPD4-209ENST00000439886 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.17
SMPD4-209ENST00000439886 TNNT3P45378 269 aaPredicted RBP14.02□□□□□ -0.17
SMPD4-209ENST00000439886 BRD1O95696 1058 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 SLC52A1Q9NWF4 448 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
SMPD4-209ENST00000439886 ATP10AO60312 1499 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 CPA1P15085 419 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 NAA30Q147X3 362 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-209ENST00000439886 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-209ENST00000439886 MCM10Q7L590 875 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 MAST1Q9Y2H9 1570 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 PTGS1P23219 599 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 TPD52L1Q16890 204 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-209ENST00000439886 FAM184AQ8NB25 1140 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 ARHGEF5Q12774 1597 aa14.01□□□□□ -0.17
SMPD4-209ENST00000439886 CEP85Q6P2H3 762 aa14□□□□□ -0.17
SMPD4-209ENST00000439886 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
SMPD4-209ENST00000439886 SRCIN1Q9C0H9 1055 aa14□□□□□ -0.17
SMPD4-209ENST00000439886 C14orf93Q9H972 538 aaKnown RBP14□□□□□ -0.17
SMPD4-209ENST00000439886 NUTM2FA1L443 756 aa14□□□□□ -0.17
SMPD4-209ENST00000439886 PDE1AP54750 535 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms