RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 CNKSR2Q8WXI2 1034 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 SECISBP2LQ93073 1101 aaKnown RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 H3BQV1 296 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 FOSBP53539 338 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 IFFO2Q5TF58 517 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 PPP1R1BQ9UD71 204 aaPredicted RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 GPATCH8Q9UKJ3 1502 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 DTNBO60941 627 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 CEBPZQ03701 1054 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 TNMDQ9H2S6 317 aa7.36□□□□□ -1.23
BDNF-210ENST00000438929 TRMT1Q9NXH9 659 aaKnown RBP7.36□□□□□ -1.23
BDNF-210ENST00000438929 ARHGEF12Q9NZN5 1544 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 MNS1Q8NEH6 495 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 GPS2Q13227 327 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 FKBP5Q13451 457 aaPredicted RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 CCDC186Q7Z3E2 898 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 OTUD7AQ8TE49 926 aaPredicted RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 USP26Q9BXU7 913 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 ALDH1L2Q3SY69 923 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
BDNF-210ENST00000438929 ATP10BO94823 1461 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 WDR7Q9Y4E6 1490 aa7.35□□□□□ -1.23
BDNF-210ENST00000438929 GADD45BO75293 160 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 TIGD1Q96MW7 591 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 NUP62CLQ9H1M0 184 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 IL1RAPL2Q9NP60 686 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PRDM4Q9UKN5 801 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 ADGRF5Q8IZF2 1346 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 MAGI2Q86UL8 1455 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 SIGLEC1Q9BZZ2 1709 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 TSPOAP1O95153 1857 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 UVSSAQ2YD98 709 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PLEKHM2Q8IWE5 1019 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 POLR3GO15318 223 aaPredicted RBP7.34□□□□□ -1.23
BDNF-210ENST00000438929 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PTGS1P23219 599 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 MAP3K11Q16584 847 aa7.34□□□□□ -1.23
BDNF-210ENST00000438929 SCAF11Q99590 1463 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 KCNA4P22459 653 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 FBLN1P23142 703 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 RPAP2Q8IXW5 612 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 GLI2P10070 1586 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 KRT85P78386 507 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 SKIDA1Q1XH10 827 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 UTP14CQ5TAP6 766 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 LARP1BQ659C4 914 aaKnown RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 KDM4AO75164 1064 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 MX1P20591 662 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 TPM4P67936 248 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
BDNF-210ENST00000438929 TSPYL6Q8N831 410 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
BDNF-210ENST00000438929 NUTM2FA1L443 756 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZBTB7BO15156 539 aaPredicted RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 UBE2HP62256 183 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 OGFRQ9NZT2 677 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ASXL2Q76L83 1435 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 DNMT1P26358 1616 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 SURF6O75683 361 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 STK3Q13188 491 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 FEZ1Q99689 392 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 LRRCC1Q9C099 1032 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 A2MP01023 1474 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 MBD5Q9P267 1494 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 ABCC11Q96J66 1382 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 STX6O43752 255 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 PDLIM2Q96JY6 352 aa7.32□□□□□ -1.24
BDNF-210ENST00000438929 IBTKQ9P2D0 1353 aaPredicted RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 GSPT1P15170 499 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 CWC27Q6UX04 472 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
BDNF-210ENST00000438929 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
BDNF-210ENST00000438929 SMC2O95347 1197 aa7.31□□□□□ -1.24
BDNF-210ENST00000438929 CASTP20810 708 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms