RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
TVP23C-204ENST00000438826 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
TVP23C-204ENST00000438826 PCDHB15Q9Y5E8 787 aa22.18■■□□□ 1.14
TVP23C-204ENST00000438826 PHRF1Q9P1Y6 1649 aaKnown RBP22.18■■□□□ 1.14
TVP23C-204ENST00000438826 USP19O94966 1318 aa22.18■■□□□ 1.14
TVP23C-204ENST00000438826 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
TVP23C-204ENST00000438826 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
TVP23C-204ENST00000438826 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
TVP23C-204ENST00000438826 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
TVP23C-204ENST00000438826 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
TVP23C-204ENST00000438826 PDE4AP27815 886 aa22.15■■□□□ 1.14
TVP23C-204ENST00000438826 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
TVP23C-204ENST00000438826 RWDD1Q9H446 243 aaPredicted RBP22.14■■□□□ 1.13
TVP23C-204ENST00000438826 MSH6P52701 1360 aa22.14■■□□□ 1.13
TVP23C-204ENST00000438826 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
TVP23C-204ENST00000438826 USHBP1Q8N6Y0 703 aa22.13■■□□□ 1.13
TVP23C-204ENST00000438826 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
TVP23C-204ENST00000438826 BACH2Q9BYV9 841 aa22.13■■□□□ 1.13
TVP23C-204ENST00000438826 MAP3K5Q99683 1374 aa22.11■■□□□ 1.13
TVP23C-204ENST00000438826 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
TVP23C-204ENST00000438826 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
TVP23C-204ENST00000438826 ZBTB40Q9NUA8 1239 aa22.1■■□□□ 1.13
TVP23C-204ENST00000438826 NPHP3Q7Z494 1330 aa22.1■■□□□ 1.13
TVP23C-204ENST00000438826 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
TVP23C-204ENST00000438826 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
TVP23C-204ENST00000438826 RGS3P49796 1198 aa22.09■■□□□ 1.13
TVP23C-204ENST00000438826 API5Q9BZZ5 524 aaKnown RBP22.09■■□□□ 1.13
TVP23C-204ENST00000438826 CHMP4BQ9H444 224 aaKnown RBP22.09■■□□□ 1.13
TVP23C-204ENST00000438826 MIS18AQ9NYP9 233 aa22.09■■□□□ 1.13
TVP23C-204ENST00000438826 STRCQ7RTU9 1775 aa22.08■■□□□ 1.13
TVP23C-204ENST00000438826 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
TVP23C-204ENST00000438826 ABCC4O15439 1325 aa22.07■■□□□ 1.12
TVP23C-204ENST00000438826 HDAC1Q13547 482 aaPredicted RBP22.07■■□□□ 1.12
TVP23C-204ENST00000438826 IL17REQ8NFR9 667 aa22.07■■□□□ 1.12
TVP23C-204ENST00000438826 ANKRD24Q8TF21 1146 aa22.07■■□□□ 1.12
TVP23C-204ENST00000438826 LRRC37A3O60309 1634 aa22.06■■□□□ 1.12
TVP23C-204ENST00000438826 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
TVP23C-204ENST00000438826 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
TVP23C-204ENST00000438826 MED1Q15648 1581 aaPredicted RBP22.04■■□□□ 1.12
TVP23C-204ENST00000438826 AXIN2Q9Y2T1 843 aa22.04■■□□□ 1.12
TVP23C-204ENST00000438826 NCAPD2Q15021 1401 aa22.04■■□□□ 1.12
TVP23C-204ENST00000438826 ZBTB7BO15156 539 aaPredicted RBP22.03■■□□□ 1.12
TVP23C-204ENST00000438826 ZC3H6P61129 1189 aaKnown RBP22.03■■□□□ 1.12
TVP23C-204ENST00000438826 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
TVP23C-204ENST00000438826 TNS3Q68CZ2 1445 aa22.02■■□□□ 1.12
TVP23C-204ENST00000438826 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
TVP23C-204ENST00000438826 ANP32AP39687 249 aaKnown RBP22.02■■□□□ 1.12
TVP23C-204ENST00000438826 FAM161AQ3B820 660 aa22.02■■□□□ 1.12
TVP23C-204ENST00000438826 AMOTQ4VCS5 1084 aa22.02■■□□□ 1.12
TVP23C-204ENST00000438826 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.12
TVP23C-204ENST00000438826 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
TVP23C-204ENST00000438826 PXDNQ92626 1479 aa22.01■■□□□ 1.11
TVP23C-204ENST00000438826 PTPRCP08575 1304 aa22.01■■□□□ 1.11
TVP23C-204ENST00000438826 CEMIPQ8WUJ3 1361 aa22■■□□□ 1.11
TVP23C-204ENST00000438826 ZNF335Q9H4Z2 1342 aaPredicted RBP22■■□□□ 1.11
TVP23C-204ENST00000438826 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
TVP23C-204ENST00000438826 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
TVP23C-204ENST00000438826 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
TVP23C-204ENST00000438826 ERBB3P21860 1342 aa21.99■■□□□ 1.11
TVP23C-204ENST00000438826 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
TVP23C-204ENST00000438826 SLC4A2P04920 1241 aa21.98■■□□□ 1.11
TVP23C-204ENST00000438826 AKAP4Q5JQC9 854 aa21.98■■□□□ 1.11
TVP23C-204ENST00000438826 CAMTA1Q9Y6Y1 1673 aa21.97■■□□□ 1.11
TVP23C-204ENST00000438826 C8orf34Q49A92 452 aa21.97■■□□□ 1.11
TVP23C-204ENST00000438826 ZNF530Q6P9A1 599 aaPredicted RBP21.97■■□□□ 1.11
TVP23C-204ENST00000438826 MSH5O43196 834 aa21.96■■□□□ 1.11
TVP23C-204ENST00000438826 INTS3Q68E01 1043 aaKnown RBP21.96■■□□□ 1.11
TVP23C-204ENST00000438826 RGS12O14924 1447 aa21.96■■□□□ 1.11
TVP23C-204ENST00000438826 SMC5Q8IY18 1101 aa21.96■■□□□ 1.11
TVP23C-204ENST00000438826 SLAIN2Q9P270 581 aa21.96■■□□□ 1.11
TVP23C-204ENST00000438826 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 CABLES1Q8TDN4 633 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 STK31Q9BXU1 1019 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 LGR6Q9HBX8 967 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 LMO7Q8WWI1 1683 aa21.94■■□□□ 1.1
TVP23C-204ENST00000438826 RGPD5Q99666 1765 aa21.93■■□□□ 1.1
TVP23C-204ENST00000438826 NPM2Q86SE8 214 aaKnown RBP21.92■■□□□ 1.1
TVP23C-204ENST00000438826 ABCC6O95255 1503 aa21.91■■□□□ 1.1
TVP23C-204ENST00000438826 TEFQ10587 303 aa21.91■■□□□ 1.1
TVP23C-204ENST00000438826 IPO9Q96P70 1041 aaKnown RBP21.91■■□□□ 1.1
TVP23C-204ENST00000438826 CPDO75976 1380 aa21.91■■□□□ 1.1
TVP23C-204ENST00000438826 MPRIPQ6WCQ1 1025 aa21.9■■□□□ 1.1
TVP23C-204ENST00000438826 C1orf115Q9H7X2 142 aa21.9■■□□□ 1.1
TVP23C-204ENST00000438826 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
TVP23C-204ENST00000438826 COL18A1P39060 1754 aa21.9■■□□□ 1.1
TVP23C-204ENST00000438826 OVOS2A0A0G2JMS6 1433 aa21.9■■□□□ 1.1
TVP23C-204ENST00000438826 SOS2Q07890 1332 aaPredicted RBP21.89■■□□□ 1.1
TVP23C-204ENST00000438826 RNMTO43148 476 aaKnown RBP21.89■■□□□ 1.09
TVP23C-204ENST00000438826 G2E3Q7L622 706 aa21.89■■□□□ 1.09
TVP23C-204ENST00000438826 RAPGEF4Q8WZA2 1011 aa21.89■■□□□ 1.09
TVP23C-204ENST00000438826 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
TVP23C-204ENST00000438826 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
TVP23C-204ENST00000438826 CHRNA2Q15822 529 aa21.88■■□□□ 1.09
TVP23C-204ENST00000438826 GCC1Q96CN9 775 aa21.88■■□□□ 1.09
TVP23C-204ENST00000438826 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
TVP23C-204ENST00000438826 EIF4A1P60842 406 aaKnown RBP21.87■■□□□ 1.09
TVP23C-204ENST00000438826 NUCB1Q02818 461 aa21.87■■□□□ 1.09
TVP23C-204ENST00000438826 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
TVP23C-204ENST00000438826 HOXB7P09629 217 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms