RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 XRN1Q8IZH2 1706 aaKnown RBP16■□□□□ 0.15
HCG18-236ENST00000438412 F6X3S4 739 aa15.99■□□□□ 0.15
HCG18-236ENST00000438412 FLT4P35916 1363 aa15.99■□□□□ 0.15
HCG18-236ENST00000438412 RGS12O14924 1447 aa15.99■□□□□ 0.15
HCG18-236ENST00000438412 CRB1P82279 1406 aa15.99■□□□□ 0.15
HCG18-236ENST00000438412 PIK3R4Q99570 1358 aa15.98■□□□□ 0.15
HCG18-236ENST00000438412 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
HCG18-236ENST00000438412 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
HCG18-236ENST00000438412 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
HCG18-236ENST00000438412 ARHGAP45Q92619 1136 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 TTC21AQ8NDW8 1320 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 MSH6P52701 1360 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
HCG18-236ENST00000438412 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 HOXC9P31274 260 aa15.97■□□□□ 0.15
HCG18-236ENST00000438412 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
HCG18-236ENST00000438412 MEIS3Q99687 375 aa15.96■□□□□ 0.15
HCG18-236ENST00000438412 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
HCG18-236ENST00000438412 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
HCG18-236ENST00000438412 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
HCG18-236ENST00000438412 SLC4A10Q6U841 1118 aa15.95■□□□□ 0.14
HCG18-236ENST00000438412 ARHGEF10O15013 1369 aa15.95■□□□□ 0.14
HCG18-236ENST00000438412 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
HCG18-236ENST00000438412 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
HCG18-236ENST00000438412 SMARCA5O60264 1052 aaPredicted RBP15.94■□□□□ 0.14
HCG18-236ENST00000438412 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
HCG18-236ENST00000438412 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
HCG18-236ENST00000438412 KDRP35968 1356 aa15.93■□□□□ 0.14
HCG18-236ENST00000438412 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
HCG18-236ENST00000438412 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
HCG18-236ENST00000438412 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
HCG18-236ENST00000438412 NWD1Q149M9 1564 aa15.91■□□□□ 0.14
HCG18-236ENST00000438412 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
HCG18-236ENST00000438412 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
HCG18-236ENST00000438412 GSPT1P15170 499 aaKnown RBP15.9■□□□□ 0.14
HCG18-236ENST00000438412 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
HCG18-236ENST00000438412 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
HCG18-236ENST00000438412 ANKLE2Q86XL3 938 aa15.9■□□□□ 0.14
HCG18-236ENST00000438412 BECN1Q14457 450 aa15.89■□□□□ 0.13
HCG18-236ENST00000438412 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
HCG18-236ENST00000438412 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
HCG18-236ENST00000438412 ANTXR1Q9H6X2 564 aa15.89■□□□□ 0.13
HCG18-236ENST00000438412 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
HCG18-236ENST00000438412 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
HCG18-236ENST00000438412 TBC1D9Q6ZT07 1266 aa15.88■□□□□ 0.13
HCG18-236ENST00000438412 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
HCG18-236ENST00000438412 LTN1O94822 1766 aa15.88■□□□□ 0.13
HCG18-236ENST00000438412 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
HCG18-236ENST00000438412 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
HCG18-236ENST00000438412 CHD2O14647 1828 aaKnown RBP15.88■□□□□ 0.13
HCG18-236ENST00000438412 KIAA0232Q92628 1395 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 PSME1Q06323 249 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
HCG18-236ENST00000438412 ANKARQ7Z5J8 1434 aa15.87■□□□□ 0.13
HCG18-236ENST00000438412 BMP2KLQ5H9B9 411 aa15.86■□□□□ 0.13
HCG18-236ENST00000438412 PLEKHM2Q8IWE5 1019 aa15.86■□□□□ 0.13
HCG18-236ENST00000438412 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
HCG18-236ENST00000438412 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
HCG18-236ENST00000438412 KCNQ3O43525 872 aa15.86■□□□□ 0.13
HCG18-236ENST00000438412 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
HCG18-236ENST00000438412 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
HCG18-236ENST00000438412 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
HCG18-236ENST00000438412 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
HCG18-236ENST00000438412 ANXA1P04083 346 aa15.84■□□□□ 0.13
HCG18-236ENST00000438412 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
HCG18-236ENST00000438412 KIF2CQ99661 725 aa15.84■□□□□ 0.13
HCG18-236ENST00000438412 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
HCG18-236ENST00000438412 EXOC6BQ9Y2D4 811 aa15.83■□□□□ 0.12
HCG18-236ENST00000438412 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
HCG18-236ENST00000438412 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
HCG18-236ENST00000438412 FLIIQ13045 1269 aa15.83■□□□□ 0.12
HCG18-236ENST00000438412 GSE1Q14687 1217 aa15.83■□□□□ 0.12
HCG18-236ENST00000438412 PTPRCP08575 1304 aa15.83■□□□□ 0.12
HCG18-236ENST00000438412 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
HCG18-236ENST00000438412 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
HCG18-236ENST00000438412 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
HCG18-236ENST00000438412 NFAT5O94916 1531 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 IP6K1Q92551 441 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
HCG18-236ENST00000438412 ARXQ96QS3 562 aa15.79■□□□□ 0.12
HCG18-236ENST00000438412 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
HCG18-236ENST00000438412 ADGRL3Q9HAR2 1447 aa15.79■□□□□ 0.12
HCG18-236ENST00000438412 RBM25P49756 843 aaKnown RBP15.79■□□□□ 0.12
HCG18-236ENST00000438412 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
HCG18-236ENST00000438412 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
HCG18-236ENST00000438412 PXDNQ92626 1479 aa15.78■□□□□ 0.12
HCG18-236ENST00000438412 PRAMEF22A3QJZ6 481 aa15.78■□□□□ 0.12
HCG18-236ENST00000438412 GCP02774 474 aa15.77■□□□□ 0.12
HCG18-236ENST00000438412 SDSP20132 328 aa15.77■□□□□ 0.12
HCG18-236ENST00000438412 HDGFL1Q5TGJ6 251 aa15.77■□□□□ 0.12
HCG18-236ENST00000438412 RTN4Q9NQC3 1192 aaKnown RBP15.77■□□□□ 0.12
HCG18-236ENST00000438412 BRPF3Q9ULD4 1205 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms