RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
LINC00242-201ENST00000437615 CRB1P82279 1406 aa15.77■□□□□ 0.12
LINC00242-201ENST00000437615 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
LINC00242-201ENST00000437615 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
LINC00242-201ENST00000437615 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.11
LINC00242-201ENST00000437615 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.11
LINC00242-201ENST00000437615 ZBTB40Q9NUA8 1239 aa15.77■□□□□ 0.11
LINC00242-201ENST00000437615 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
LINC00242-201ENST00000437615 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
LINC00242-201ENST00000437615 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
LINC00242-201ENST00000437615 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
LINC00242-201ENST00000437615 ARHGEF25Q86VW2 580 aa15.75■□□□□ 0.11
LINC00242-201ENST00000437615 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
LINC00242-201ENST00000437615 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
LINC00242-201ENST00000437615 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
LINC00242-201ENST00000437615 NFAT5O94916 1531 aa15.74■□□□□ 0.11
LINC00242-201ENST00000437615 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
LINC00242-201ENST00000437615 PDZRN3Q9UPQ7 1066 aa15.74■□□□□ 0.11
LINC00242-201ENST00000437615 ZBTB7BO15156 539 aaPredicted RBP15.73■□□□□ 0.11
LINC00242-201ENST00000437615 HDAC1Q13547 482 aaPredicted RBP15.73■□□□□ 0.11
LINC00242-201ENST00000437615 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
LINC00242-201ENST00000437615 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
LINC00242-201ENST00000437615 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
LINC00242-201ENST00000437615 LRRC59Q96AG4 307 aaKnown RBP15.73■□□□□ 0.11
LINC00242-201ENST00000437615 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
LINC00242-201ENST00000437615 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
LINC00242-201ENST00000437615 NCOA3Q9Y6Q9 1424 aa15.72■□□□□ 0.11
LINC00242-201ENST00000437615 C8orf34Q49A92 452 aa15.71■□□□□ 0.11
LINC00242-201ENST00000437615 ABCC4O15439 1325 aa15.71■□□□□ 0.11
LINC00242-201ENST00000437615 USP19O94966 1318 aa15.71■□□□□ 0.11
LINC00242-201ENST00000437615 MST1RQ04912 1400 aa15.71■□□□□ 0.11
LINC00242-201ENST00000437615 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
LINC00242-201ENST00000437615 MAP3K5Q99683 1374 aa15.7■□□□□ 0.1
LINC00242-201ENST00000437615 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
LINC00242-201ENST00000437615 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
LINC00242-201ENST00000437615 ZC3H6P61129 1189 aaKnown RBP15.69■□□□□ 0.1
LINC00242-201ENST00000437615 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
LINC00242-201ENST00000437615 ANKRD24Q8TF21 1146 aa15.69■□□□□ 0.1
LINC00242-201ENST00000437615 MSH6P52701 1360 aa15.68■□□□□ 0.1
LINC00242-201ENST00000437615 LTN1O94822 1766 aa15.68■□□□□ 0.1
LINC00242-201ENST00000437615 DCCP43146 1447 aa15.68■□□□□ 0.1
LINC00242-201ENST00000437615 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
LINC00242-201ENST00000437615 SLIT3O75094 1523 aa15.67■□□□□ 0.1
LINC00242-201ENST00000437615 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
LINC00242-201ENST00000437615 PLEKHO1Q53GL0 409 aaPredicted RBP15.67■□□□□ 0.1
LINC00242-201ENST00000437615 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
LINC00242-201ENST00000437615 C1orf115Q9H7X2 142 aa15.67■□□□□ 0.1
LINC00242-201ENST00000437615 PTPRCP08575 1304 aa15.66■□□□□ 0.1
LINC00242-201ENST00000437615 LGR6Q9HBX8 967 aa15.66■□□□□ 0.1
LINC00242-201ENST00000437615 BABAM1Q9NWV8 329 aa15.66■□□□□ 0.1
LINC00242-201ENST00000437615 KIF1AQ12756 1690 aa15.66■□□□□ 0.1
LINC00242-201ENST00000437615 STRCP1A6NGW2 1772 aa15.65■□□□□ 0.1
LINC00242-201ENST00000437615 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
LINC00242-201ENST00000437615 INTS3Q68E01 1043 aaKnown RBP15.65■□□□□ 0.1
LINC00242-201ENST00000437615 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
LINC00242-201ENST00000437615 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
LINC00242-201ENST00000437615 STK31Q9BXU1 1019 aa15.64■□□□□ 0.09
LINC00242-201ENST00000437615 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
LINC00242-201ENST00000437615 TRPM3Q9HCF6 1732 aaPredicted RBP15.64■□□□□ 0.09
LINC00242-201ENST00000437615 AKAP4Q5JQC9 854 aa15.64■□□□□ 0.09
LINC00242-201ENST00000437615 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
LINC00242-201ENST00000437615 CCDC30Q5VVM6 783 aa15.63■□□□□ 0.09
LINC00242-201ENST00000437615 G2E3Q7L622 706 aa15.63■□□□□ 0.09
LINC00242-201ENST00000437615 MPRIPQ6WCQ1 1025 aa15.63■□□□□ 0.09
LINC00242-201ENST00000437615 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
LINC00242-201ENST00000437615 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
LINC00242-201ENST00000437615 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
LINC00242-201ENST00000437615 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
LINC00242-201ENST00000437615 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
LINC00242-201ENST00000437615 ERBB3P21860 1342 aa15.61■□□□□ 0.09
LINC00242-201ENST00000437615 NUCB1Q02818 461 aa15.61■□□□□ 0.09
LINC00242-201ENST00000437615 TEFQ10587 303 aa15.61■□□□□ 0.09
LINC00242-201ENST00000437615 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
LINC00242-201ENST00000437615 ZNF335Q9H4Z2 1342 aaPredicted RBP15.61■□□□□ 0.09
LINC00242-201ENST00000437615 BRINP3Q76B58 766 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 RGS12O14924 1447 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 SPATA31A3Q5VYP0 1347 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 GCC1Q96CN9 775 aa15.6■□□□□ 0.09
LINC00242-201ENST00000437615 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
LINC00242-201ENST00000437615 F6X3S4 739 aa15.59■□□□□ 0.09
LINC00242-201ENST00000437615 MED1Q15648 1581 aaPredicted RBP15.59■□□□□ 0.09
LINC00242-201ENST00000437615 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
LINC00242-201ENST00000437615 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
LINC00242-201ENST00000437615 LNPKQ9C0E8 428 aa15.59■□□□□ 0.09
LINC00242-201ENST00000437615 SLAIN2Q9P270 581 aa15.59■□□□□ 0.09
LINC00242-201ENST00000437615 BTBD11A6QL63 1104 aa15.58■□□□□ 0.09
LINC00242-201ENST00000437615 RNMTO43148 476 aaKnown RBP15.58■□□□□ 0.09
LINC00242-201ENST00000437615 CHRNA2Q15822 529 aa15.58■□□□□ 0.09
LINC00242-201ENST00000437615 SEC24BO95487 1268 aa15.58■□□□□ 0.08
LINC00242-201ENST00000437615 CSB-PGBD3P0DP91 1061 aa15.58■□□□□ 0.08
LINC00242-201ENST00000437615 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
LINC00242-201ENST00000437615 FLIIQ13045 1269 aa15.58■□□□□ 0.08
LINC00242-201ENST00000437615 NCAPD2Q15021 1401 aa15.58■□□□□ 0.08
LINC00242-201ENST00000437615 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
LINC00242-201ENST00000437615 FKBP5Q13451 457 aaPredicted RBP15.57■□□□□ 0.08
LINC00242-201ENST00000437615 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
LINC00242-201ENST00000437615 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
LINC00242-201ENST00000437615 LRRC37A3O60309 1634 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms