RNA–Protein interactions for RNA: ENST00000436778.5

NR1H3-209, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-209ENST00000436778 PKD1L3Q7Z443 1732 aa25.2■■□□□ 1.63
NR1H3-209ENST00000436778 SULT6B1Q6IMI4 303 aa25.17■■□□□ 1.62
NR1H3-209ENST00000436778 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
NR1H3-209ENST00000436778 SHANK3Q9BYB0 1731 aa25.17■■□□□ 1.62
NR1H3-209ENST00000436778 AEBP1Q8IUX7 1158 aa25.15■■□□□ 1.62
NR1H3-209ENST00000436778 FAM196AQ6ZSG2 479 aa25.14■■□□□ 1.62
NR1H3-209ENST00000436778 MARCH10Q8NA82 808 aaPredicted RBP25.14■■□□□ 1.62
NR1H3-209ENST00000436778 PCDH11XQ9BZA7 1347 aa25.13■■□□□ 1.61
NR1H3-209ENST00000436778 PCDH11YQ9BZA8 1340 aa25.13■■□□□ 1.61
NR1H3-209ENST00000436778 U2SURPO15042 1029 aaKnown RBP25.13■■□□□ 1.61
NR1H3-209ENST00000436778 AMOTQ4VCS5 1084 aa25.13■■□□□ 1.61
NR1H3-209ENST00000436778 SPG7Q9UQ90 795 aa25.13■■□□□ 1.61
NR1H3-209ENST00000436778 FCHSD2O94868 740 aa25.11■■□□□ 1.61
NR1H3-209ENST00000436778 PLEKHO1Q53GL0 409 aaPredicted RBP25.1■■□□□ 1.61
NR1H3-209ENST00000436778 HMOX1P09601 288 aa25.09■■□□□ 1.61
NR1H3-209ENST00000436778 RSPH6AQ9H0K4 717 aa25.09■■□□□ 1.61
NR1H3-209ENST00000436778 U2AF1L5P0DN76 240 aaPredicted RBP25.08■■□□□ 1.61
NR1H3-209ENST00000436778 U2AF1Q01081 240 aaKnown RBP eCLIP25.08■■□□□ 1.61
NR1H3-209ENST00000436778 CCDC125Q86Z20 511 aa25.08■■□□□ 1.61
NR1H3-209ENST00000436778 NKX1-1Q15270 411 aaPredicted RBP25.07■■□□□ 1.6
NR1H3-209ENST00000436778 CYP27B1O15528 508 aa25.06■■□□□ 1.6
NR1H3-209ENST00000436778 SOCS7O14512 581 aa25.05■■□□□ 1.6
NR1H3-209ENST00000436778 IFNL2Q8IZJ0 200 aa25.05■■□□□ 1.6
NR1H3-209ENST00000436778 DDX54Q8TDD1 881 aaKnown RBP25.05■■□□□ 1.6
NR1H3-209ENST00000436778 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
NR1H3-209ENST00000436778 SBF2Q86WG5 1849 aa25.03■■□□□ 1.6
NR1H3-209ENST00000436778 EP400Q96L91 3159 aa25.03■■□□□ 1.6
NR1H3-209ENST00000436778 PHKG2P15735 406 aa25.03■■□□□ 1.6
NR1H3-209ENST00000436778 FAM182BQ5T319 152 aa25.03■■□□□ 1.6
NR1H3-209ENST00000436778 UPF1Q92900 1129 aaKnown RBP eCLIP25.03■■□□□ 1.6
NR1H3-209ENST00000436778 HSP90AB1P08238 724 aaKnown RBP25.02■■□□□ 1.6
NR1H3-209ENST00000436778 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
NR1H3-209ENST00000436778 NHSQ6T4R5 1651 aa25.01■■□□□ 1.59
NR1H3-209ENST00000436778 DIEXFQ68CQ4 756 aaKnown RBP25.01■■□□□ 1.59
NR1H3-209ENST00000436778 WDR43Q15061 677 aaKnown RBP eCLIP25■■□□□ 1.59
NR1H3-209ENST00000436778 GAS2L2Q8NHY3 880 aa25■■□□□ 1.59
NR1H3-209ENST00000436778 ZNF530Q6P9A1 599 aaPredicted RBP24.99■■□□□ 1.59
NR1H3-209ENST00000436778 PLEKHF1Q96S99 279 aa24.99■■□□□ 1.59
NR1H3-209ENST00000436778 TNS1Q9HBL0 1735 aaKnown RBP24.99■■□□□ 1.59
NR1H3-209ENST00000436778 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
NR1H3-209ENST00000436778 AKAP4Q5JQC9 854 aa24.98■■□□□ 1.59
NR1H3-209ENST00000436778 C1orf141Q5JVX7 400 aa24.98■■□□□ 1.59
NR1H3-209ENST00000436778 BCL11BQ9C0K0 894 aaPredicted RBP24.98■■□□□ 1.59
NR1H3-209ENST00000436778 DOT1LQ8TEK3 1739 aa24.97■■□□□ 1.59
NR1H3-209ENST00000436778 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
NR1H3-209ENST00000436778 NEFMP07197 916 aa24.96■■□□□ 1.59
NR1H3-209ENST00000436778 CCDC184Q52MB2 194 aa24.96■■□□□ 1.59
NR1H3-209ENST00000436778 DCAF5Q96JK2 942 aa24.96■■□□□ 1.59
NR1H3-209ENST00000436778 MRS2Q9HD23 443 aa24.96■■□□□ 1.59
NR1H3-209ENST00000436778 PHACTR3Q96KR7 559 aa24.95■■□□□ 1.58
NR1H3-209ENST00000436778 TOGARAM1Q9Y4F4 1720 aa24.95■■□□□ 1.58
NR1H3-209ENST00000436778 CCER2I3L3R5 266 aa24.94■■□□□ 1.58
NR1H3-209ENST00000436778 TRIM37O94972 964 aa24.94■■□□□ 1.58
NR1H3-209ENST00000436778 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
NR1H3-209ENST00000436778 SF3B2Q13435 895 aaKnown RBP24.93■■□□□ 1.58
NR1H3-209ENST00000436778 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
NR1H3-209ENST00000436778 KDM6AO15550 1401 aaPredicted RBP24.93■■□□□ 1.58
NR1H3-209ENST00000436778 RGPD3A6NKT7 1758 aaPredicted RBP24.93■■□□□ 1.58
NR1H3-209ENST00000436778 RGPD4Q7Z3J3 1758 aa24.93■■□□□ 1.58
NR1H3-209ENST00000436778 ERVV-2B6SEH9 535 aa24.92■■□□□ 1.58
NR1H3-209ENST00000436778 MAP3K5Q99683 1374 aa24.92■■□□□ 1.58
NR1H3-209ENST00000436778 SCN11AQ9UI33 1791 aa24.9■■□□□ 1.58
NR1H3-209ENST00000436778 MAPK8IP3Q9UPT6 1336 aa24.9■■□□□ 1.58
NR1H3-209ENST00000436778 HTATSF1O43719 755 aaKnown RBP24.9■■□□□ 1.58
NR1H3-209ENST00000436778 RUNDC1Q96C34 613 aa24.9■■□□□ 1.58
NR1H3-209ENST00000436778 MRC1P22897 1456 aa24.89■■□□□ 1.58
NR1H3-209ENST00000436778 GNAT3A8MTJ3 354 aa24.89■■□□□ 1.58
NR1H3-209ENST00000436778 PLSCR1O15162 318 aa24.89■■□□□ 1.58
NR1H3-209ENST00000436778 BAG6P46379 1132 aa24.89■■□□□ 1.58
NR1H3-209ENST00000436778 ACSBG1Q96GR2 724 aa24.89■■□□□ 1.58
NR1H3-209ENST00000436778 KCNQ2O43526 872 aa24.88■■□□□ 1.57
NR1H3-209ENST00000436778 PRIM1P49642 420 aaKnown RBP24.88■■□□□ 1.57
NR1H3-209ENST00000436778 BTAF1O14981 1849 aa24.87■■□□□ 1.57
NR1H3-209ENST00000436778 ITGB4P16144 1822 aa24.87■■□□□ 1.57
NR1H3-209ENST00000436778 NFE2L2Q16236 605 aa24.87■■□□□ 1.57
NR1H3-209ENST00000436778 CEMIPQ8WUJ3 1361 aa24.86■■□□□ 1.57
NR1H3-209ENST00000436778 RNMTO43148 476 aaKnown RBP24.85■■□□□ 1.57
NR1H3-209ENST00000436778 APBA3O96018 575 aa24.85■■□□□ 1.57
NR1H3-209ENST00000436778 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
NR1H3-209ENST00000436778 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
NR1H3-209ENST00000436778 SYTL4Q96C24 671 aaPredicted RBP24.83■■□□□ 1.57
NR1H3-209ENST00000436778 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
NR1H3-209ENST00000436778 VIRMAQ69YN4 1812 aaKnown RBP24.82■■□□□ 1.56
NR1H3-209ENST00000436778 TMPOP42166 694 aaKnown RBP24.81■■□□□ 1.56
NR1H3-209ENST00000436778 NCBP3Q53F19 620 aaKnown RBP24.81■■□□□ 1.56
NR1H3-209ENST00000436778 IL17REQ8NFR9 667 aa24.81■■□□□ 1.56
NR1H3-209ENST00000436778 PIGBQ92521 554 aa24.81■■□□□ 1.56
NR1H3-209ENST00000436778 CAMKK2Q96RR4 588 aa24.81■■□□□ 1.56
NR1H3-209ENST00000436778 SLC52A2Q9HAB3 445 aa24.81■■□□□ 1.56
NR1H3-209ENST00000436778 LGR6Q9HBX8 967 aa24.81■■□□□ 1.56
NR1H3-209ENST00000436778 DLG5Q8TDM6 1919 aa24.8■■□□□ 1.56
NR1H3-209ENST00000436778 CABP4P57796 275 aa24.8■■□□□ 1.56
NR1H3-209ENST00000436778 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
NR1H3-209ENST00000436778 SMARCC1Q92922 1105 aaPredicted RBP24.8■■□□□ 1.56
NR1H3-209ENST00000436778 RREB1Q92766 1687 aa24.79■■□□□ 1.56
NR1H3-209ENST00000436778 LMOD3Q0VAK6 560 aa24.79■■□□□ 1.56
NR1H3-209ENST00000436778 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
NR1H3-209ENST00000436778 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
NR1H3-209ENST00000436778 LY75O60449 1722 aa24.78■■□□□ 1.56
NR1H3-209ENST00000436778 DEFB132Q7Z7B7 95 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms