RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
CTDSPL-204ENST00000435525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.94■■□□□ 1.1
CTDSPL-204ENST00000435525 GLI3P10071 1580 aa21.93■■□□□ 1.1
CTDSPL-204ENST00000435525 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
CTDSPL-204ENST00000435525 DISP2A7MBM2 1401 aa21.92■■□□□ 1.1
CTDSPL-204ENST00000435525 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
CTDSPL-204ENST00000435525 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
CTDSPL-204ENST00000435525 CCDC184Q52MB2 194 aa21.91■■□□□ 1.1
CTDSPL-204ENST00000435525 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
CTDSPL-204ENST00000435525 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
CTDSPL-204ENST00000435525 ADAMTS8Q9UP79 889 aa21.9■■□□□ 1.1
CTDSPL-204ENST00000435525 PCDH11XQ9BZA7 1347 aa21.89■■□□□ 1.1
CTDSPL-204ENST00000435525 PCDH11YQ9BZA8 1340 aa21.89■■□□□ 1.1
CTDSPL-204ENST00000435525 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
CTDSPL-204ENST00000435525 GAS2L2Q8NHY3 880 aa21.89■■□□□ 1.09
CTDSPL-204ENST00000435525 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
CTDSPL-204ENST00000435525 MEGF6O75095 1541 aa21.88■■□□□ 1.09
CTDSPL-204ENST00000435525 RGPD1P0DJD0 1748 aa21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 KRT27Q7Z3Y8 459 aa21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 DDX54Q8TDD1 881 aaKnown RBP21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 RUNDC1Q96C34 613 aa21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 TNS2Q63HR2 1409 aa21.87■■□□□ 1.09
CTDSPL-204ENST00000435525 HSP90AB1P08238 724 aaKnown RBP21.86■■□□□ 1.09
CTDSPL-204ENST00000435525 IFNL2Q8IZJ0 200 aa21.85■■□□□ 1.09
CTDSPL-204ENST00000435525 RGS12O14924 1447 aa21.85■■□□□ 1.09
CTDSPL-204ENST00000435525 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
CTDSPL-204ENST00000435525 THSD7AQ9UPZ6 1657 aa21.83■■□□□ 1.09
CTDSPL-204ENST00000435525 RGPD2P0DJD1 1756 aa21.83■■□□□ 1.09
CTDSPL-204ENST00000435525 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
CTDSPL-204ENST00000435525 MTHFSDQ2M296 383 aaKnown RBP21.81■■□□□ 1.08
CTDSPL-204ENST00000435525 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
CTDSPL-204ENST00000435525 CCDC146Q8IYE0 955 aa21.81■■□□□ 1.08
CTDSPL-204ENST00000435525 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
CTDSPL-204ENST00000435525 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
CTDSPL-204ENST00000435525 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
CTDSPL-204ENST00000435525 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
CTDSPL-204ENST00000435525 PHKG2P15735 406 aa21.79■■□□□ 1.08
CTDSPL-204ENST00000435525 NFE2L2Q16236 605 aa21.79■■□□□ 1.08
CTDSPL-204ENST00000435525 MARCH10Q8NA82 808 aaPredicted RBP21.79■■□□□ 1.08
CTDSPL-204ENST00000435525 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
CTDSPL-204ENST00000435525 CYP27B1O15528 508 aa21.78■■□□□ 1.08
CTDSPL-204ENST00000435525 DCAF5Q96JK2 942 aa21.78■■□□□ 1.08
CTDSPL-204ENST00000435525 WNK3Q9BYP7 1800 aa21.77■■□□□ 1.08
CTDSPL-204ENST00000435525 LRRC37A3O60309 1634 aa21.77■■□□□ 1.07
CTDSPL-204ENST00000435525 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
CTDSPL-204ENST00000435525 MAP3K5Q99683 1374 aa21.75■■□□□ 1.07
CTDSPL-204ENST00000435525 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
CTDSPL-204ENST00000435525 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
CTDSPL-204ENST00000435525 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
CTDSPL-204ENST00000435525 RIPK4P57078 832 aa21.74■■□□□ 1.07
CTDSPL-204ENST00000435525 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
CTDSPL-204ENST00000435525 APAF1O14727 1248 aa21.73■■□□□ 1.07
CTDSPL-204ENST00000435525 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
CTDSPL-204ENST00000435525 BCL9O00512 1426 aa21.72■■□□□ 1.07
CTDSPL-204ENST00000435525 ERVV-2B6SEH9 535 aa21.71■■□□□ 1.07
CTDSPL-204ENST00000435525 FAM182BQ5T319 152 aa21.71■■□□□ 1.07
CTDSPL-204ENST00000435525 MPRIPQ6WCQ1 1025 aa21.71■■□□□ 1.07
CTDSPL-204ENST00000435525 CABP4P57796 275 aa21.7■■□□□ 1.06
CTDSPL-204ENST00000435525 TEFQ10587 303 aa21.7■■□□□ 1.06
CTDSPL-204ENST00000435525 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.06
CTDSPL-204ENST00000435525 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
CTDSPL-204ENST00000435525 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
CTDSPL-204ENST00000435525 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
CTDSPL-204ENST00000435525 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
CTDSPL-204ENST00000435525 RRP7AQ9Y3A4 280 aaKnown RBP21.69■■□□□ 1.06
CTDSPL-204ENST00000435525 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
CTDSPL-204ENST00000435525 ACSBG1Q96GR2 724 aa21.67■■□□□ 1.06
CTDSPL-204ENST00000435525 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
CTDSPL-204ENST00000435525 BCL11BQ9C0K0 894 aaPredicted RBP21.66■■□□□ 1.06
CTDSPL-204ENST00000435525 CCDC125Q86Z20 511 aa21.65■■□□□ 1.06
CTDSPL-204ENST00000435525 CCDC27Q2M243 656 aa21.64■■□□□ 1.05
CTDSPL-204ENST00000435525 MCM10Q7L590 875 aa21.64■■□□□ 1.05
CTDSPL-204ENST00000435525 SLC52A2Q9HAB3 445 aa21.64■■□□□ 1.05
CTDSPL-204ENST00000435525 LGR6Q9HBX8 967 aa21.64■■□□□ 1.05
CTDSPL-204ENST00000435525 TRIM37O94972 964 aa21.63■■□□□ 1.05
CTDSPL-204ENST00000435525 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
CTDSPL-204ENST00000435525 KDM6AO15550 1401 aaPredicted RBP21.63■■□□□ 1.05
CTDSPL-204ENST00000435525 BRWD3Q6RI45 1802 aa21.62■■□□□ 1.05
CTDSPL-204ENST00000435525 NFATC2IPQ8NCF5 419 aa21.61■■□□□ 1.05
CTDSPL-204ENST00000435525 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
CTDSPL-204ENST00000435525 SALL2Q9Y467 1007 aaPredicted RBP21.61■■□□□ 1.05
CTDSPL-204ENST00000435525 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
CTDSPL-204ENST00000435525 DCTN1Q14203 1278 aa21.6■■□□□ 1.05
CTDSPL-204ENST00000435525 TAF7Q15545 349 aaPredicted RBP21.6■■□□□ 1.05
CTDSPL-204ENST00000435525 ILDR2Q71H61 639 aa21.6■■□□□ 1.05
CTDSPL-204ENST00000435525 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
CTDSPL-204ENST00000435525 SHANK3Q9BYB0 1731 aa21.6■■□□□ 1.05
CTDSPL-204ENST00000435525 KCNQ2O43526 872 aa21.59■■□□□ 1.05
CTDSPL-204ENST00000435525 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
CTDSPL-204ENST00000435525 HNRNPUQ00839 825 aaKnown RBP eCLIP21.59■■□□□ 1.056e-6■□□□□ 10.9
CTDSPL-204ENST00000435525 TTC5Q8N0Z6 440 aa21.59■■□□□ 1.05
CTDSPL-204ENST00000435525 PIGBQ92521 554 aa21.58■■□□□ 1.05
CTDSPL-204ENST00000435525 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 APBA3O96018 575 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 BAG6P46379 1132 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
CTDSPL-204ENST00000435525 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms