RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 SLC16A10Q8TF71 515 aa18.76■□□□□ 0.59
CDC42EP1-204ENST00000434728 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
CDC42EP1-204ENST00000434728 MSH5O43196 834 aa18.75■□□□□ 0.59
CDC42EP1-204ENST00000434728 TESK2Q96S53 571 aa18.75■□□□□ 0.59
CDC42EP1-204ENST00000434728 RTL1A6NKG5 1358 aa18.75■□□□□ 0.59
CDC42EP1-204ENST00000434728 QSER1Q2KHR3 1735 aa18.74■□□□□ 0.59
CDC42EP1-204ENST00000434728 FBLN1P23142 703 aa18.74■□□□□ 0.59
CDC42EP1-204ENST00000434728 KCNQ4P56696 695 aa18.74■□□□□ 0.59
CDC42EP1-204ENST00000434728 RAPGEF4Q8WZA2 1011 aa18.74■□□□□ 0.59
CDC42EP1-204ENST00000434728 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
CDC42EP1-204ENST00000434728 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
CDC42EP1-204ENST00000434728 TMF1P82094 1093 aa18.73■□□□□ 0.59
CDC42EP1-204ENST00000434728 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
CDC42EP1-204ENST00000434728 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP1-204ENST00000434728 USP47Q96K76 1375 aa18.72■□□□□ 0.59
CDC42EP1-204ENST00000434728 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
CDC42EP1-204ENST00000434728 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
CDC42EP1-204ENST00000434728 MEGF6O75095 1541 aa18.72■□□□□ 0.59
CDC42EP1-204ENST00000434728 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
CDC42EP1-204ENST00000434728 USHBP1Q8N6Y0 703 aa18.71■□□□□ 0.59
CDC42EP1-204ENST00000434728 TUBGCP6Q96RT7 1819 aa18.71■□□□□ 0.59
CDC42EP1-204ENST00000434728 LY75O60449 1722 aa18.7■□□□□ 0.58
CDC42EP1-204ENST00000434728 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
CDC42EP1-204ENST00000434728 SHANK3Q9BYB0 1731 aa18.7■□□□□ 0.58
CDC42EP1-204ENST00000434728 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
CDC42EP1-204ENST00000434728 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
CDC42EP1-204ENST00000434728 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
CDC42EP1-204ENST00000434728 NBPF6Q5VWK0 638 aa18.68■□□□□ 0.58
CDC42EP1-204ENST00000434728 NBPF4Q96M43 638 aa18.68■□□□□ 0.58
CDC42EP1-204ENST00000434728 FYB1O15117 783 aa18.67■□□□□ 0.58
CDC42EP1-204ENST00000434728 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
CDC42EP1-204ENST00000434728 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
CDC42EP1-204ENST00000434728 NSD2O96028 1365 aa18.67■□□□□ 0.58
CDC42EP1-204ENST00000434728 HMGB2P26583 209 aaKnown RBP18.66■□□□□ 0.58
CDC42EP1-204ENST00000434728 FLT4P35916 1363 aa18.65■□□□□ 0.58
CDC42EP1-204ENST00000434728 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.57
CDC42EP1-204ENST00000434728 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
CDC42EP1-204ENST00000434728 INSRP06213 1382 aa18.64■□□□□ 0.57
CDC42EP1-204ENST00000434728 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP1-204ENST00000434728 HSP90AB2PQ58FF8 381 aa18.63■□□□□ 0.57
CDC42EP1-204ENST00000434728 MSL1Q68DK7 614 aa18.63■□□□□ 0.57
CDC42EP1-204ENST00000434728 C5P01031 1676 aa18.63■□□□□ 0.57
CDC42EP1-204ENST00000434728 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
CDC42EP1-204ENST00000434728 NLGN2Q8NFZ4 835 aa18.62■□□□□ 0.57
CDC42EP1-204ENST00000434728 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
CDC42EP1-204ENST00000434728 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
CDC42EP1-204ENST00000434728 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP1-204ENST00000434728 KIF24Q5T7B8 1368 aa18.6■□□□□ 0.57
CDC42EP1-204ENST00000434728 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP1-204ENST00000434728 C1QTNF8P60827 252 aa18.6■□□□□ 0.57
CDC42EP1-204ENST00000434728 FLAD1Q8NFF5 587 aa18.6■□□□□ 0.57
CDC42EP1-204ENST00000434728 GRIN3BO60391 1043 aa18.59■□□□□ 0.57
CDC42EP1-204ENST00000434728 AK7Q96M32 723 aa18.59■□□□□ 0.57
CDC42EP1-204ENST00000434728 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
CDC42EP1-204ENST00000434728 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.57
CDC42EP1-204ENST00000434728 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP1-204ENST00000434728 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
CDC42EP1-204ENST00000434728 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
CDC42EP1-204ENST00000434728 ITGB4P16144 1822 aa18.56■□□□□ 0.56
CDC42EP1-204ENST00000434728 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
CDC42EP1-204ENST00000434728 CYP27B1O15528 508 aa18.55■□□□□ 0.56
CDC42EP1-204ENST00000434728 PHF14O94880 888 aa18.55■□□□□ 0.56
CDC42EP1-204ENST00000434728 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
CDC42EP1-204ENST00000434728 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
CDC42EP1-204ENST00000434728 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
CDC42EP1-204ENST00000434728 YBX3P16989 372 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDC42EP1-204ENST00000434728 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
CDC42EP1-204ENST00000434728 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
CDC42EP1-204ENST00000434728 TMOD3Q9NYL9 352 aa18.52■□□□□ 0.56
CDC42EP1-204ENST00000434728 CD2APQ9Y5K6 639 aa18.52■□□□□ 0.56
CDC42EP1-204ENST00000434728 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
CDC42EP1-204ENST00000434728 PIGBQ92521 554 aa18.51■□□□□ 0.55
CDC42EP1-204ENST00000434728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.49■□□□□ 0.55
CDC42EP1-204ENST00000434728 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
CDC42EP1-204ENST00000434728 UBR3Q6ZT12 1888 aa18.48■□□□□ 0.55
CDC42EP1-204ENST00000434728 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP1-204ENST00000434728 WASHC2AQ641Q2 1341 aa18.48■□□□□ 0.55
CDC42EP1-204ENST00000434728 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
CDC42EP1-204ENST00000434728 SIK1P57059 783 aa18.47■□□□□ 0.55
CDC42EP1-204ENST00000434728 EYA1Q99502 592 aa18.47■□□□□ 0.55
CDC42EP1-204ENST00000434728 GNPATO15228 680 aa18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 SSFA2P28290 1259 aa18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 NKX1-1Q15270 411 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
CDC42EP1-204ENST00000434728 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
CDC42EP1-204ENST00000434728 GPBP1L1Q9HC44 474 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP1-204ENST00000434728 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
CDC42EP1-204ENST00000434728 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
CDC42EP1-204ENST00000434728 SMIM5Q71RC9 77 aa18.44■□□□□ 0.54
CDC42EP1-204ENST00000434728 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
CDC42EP1-204ENST00000434728 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
CDC42EP1-204ENST00000434728 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
CDC42EP1-204ENST00000434728 IGSF1Q8N6C5 1336 aa18.44■□□□□ 0.54
CDC42EP1-204ENST00000434728 PHKG2P15735 406 aa18.43■□□□□ 0.54
CDC42EP1-204ENST00000434728 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
CDC42EP1-204ENST00000434728 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
CDC42EP1-204ENST00000434728 AMIGO3Q86WK7 504 aa18.42■□□□□ 0.54
CDC42EP1-204ENST00000434728 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms