RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 USHBP1Q8N6Y0 703 aa30.5■■■□□ 2.47
SEMA3B-205ENST00000434030 PPM1GO15355 546 aaPredicted RBP30.48■■■□□ 2.47
SEMA3B-205ENST00000434030 ZCRB1Q8TBF4 217 aaKnown RBP30.47■■■□□ 2.47
SEMA3B-205ENST00000434030 POLKQ9UBT6 870 aa30.45■■■□□ 2.47
SEMA3B-205ENST00000434030 WASHC2AQ641Q2 1341 aa30.45■■■□□ 2.46
SEMA3B-205ENST00000434030 TXNRD1Q16881 649 aa30.44■■■□□ 2.46
SEMA3B-205ENST00000434030 RAPGEF4Q8WZA2 1011 aa30.44■■■□□ 2.46
SEMA3B-205ENST00000434030 TNNT2P45379 298 aaPredicted RBP30.43■■■□□ 2.46
SEMA3B-205ENST00000434030 DOT1LQ8TEK3 1739 aa30.43■■■□□ 2.46
SEMA3B-205ENST00000434030 KIF7Q2M1P5 1343 aa30.42■■■□□ 2.46
SEMA3B-205ENST00000434030 TATP17735 454 aaPredicted RBP30.41■■■□□ 2.46
SEMA3B-205ENST00000434030 ANO8Q9HCE9 1232 aaPredicted RBP30.4■■■□□ 2.46
SEMA3B-205ENST00000434030 NSD2O96028 1365 aa30.4■■■□□ 2.46
SEMA3B-205ENST00000434030 NCAPD2Q15021 1401 aa30.37■■■□□ 2.45
SEMA3B-205ENST00000434030 KNSTRNQ9Y448 316 aa30.36■■■□□ 2.45
SEMA3B-205ENST00000434030 PRIM1P49642 420 aaKnown RBP30.35■■■□□ 2.45
SEMA3B-205ENST00000434030 PKD1L3Q7Z443 1732 aa30.35■■■□□ 2.45
SEMA3B-205ENST00000434030 EYA1Q99502 592 aa30.34■■■□□ 2.45
SEMA3B-205ENST00000434030 CASZ1Q86V15 1759 aa30.33■■■□□ 2.45
SEMA3B-205ENST00000434030 MORC1Q86VD1 984 aa30.33■■■□□ 2.45
SEMA3B-205ENST00000434030 SYTL4Q96C24 671 aaPredicted RBP30.33■■■□□ 2.45
SEMA3B-205ENST00000434030 PCDH11XQ9BZA7 1347 aa30.31■■■□□ 2.44
SEMA3B-205ENST00000434030 PCDH11YQ9BZA8 1340 aa30.31■■■□□ 2.44
SEMA3B-205ENST00000434030 EIF4A2Q14240 407 aaKnown RBP30.31■■■□□ 2.44
SEMA3B-205ENST00000434030 LY75O60449 1722 aa30.3■■■□□ 2.44
SEMA3B-205ENST00000434030 STK32BQ9NY57 414 aa30.3■■■□□ 2.44
SEMA3B-205ENST00000434030 PAPPAQ13219 1627 aa30.29■■■□□ 2.44
SEMA3B-205ENST00000434030 ITGB4P16144 1822 aa30.29■■■□□ 2.44
SEMA3B-205ENST00000434030 SLC15A2Q16348 729 aa30.29■■■□□ 2.44
SEMA3B-205ENST00000434030 AMER1Q5JTC6 1135 aaPredicted RBP30.29■■■□□ 2.44
SEMA3B-205ENST00000434030 CYP27B1O15528 508 aa30.28■■■□□ 2.44
SEMA3B-205ENST00000434030 LRRC4BQ9NT99 713 aa30.27■■■□□ 2.44
SEMA3B-205ENST00000434030 PDGFDQ9GZP0 370 aaPredicted RBP30.26■■■□□ 2.43
SEMA3B-205ENST00000434030 PER1O15534 1290 aaPredicted RBP30.25■■■□□ 2.43
SEMA3B-205ENST00000434030 SPON1Q9HCB6 807 aa30.25■■■□□ 2.43
SEMA3B-205ENST00000434030 TOGARAM1Q9Y4F4 1720 aa30.25■■■□□ 2.43
SEMA3B-205ENST00000434030 SLC27A3Q5K4L6 730 aa30.23■■■□□ 2.43
SEMA3B-205ENST00000434030 SPG7Q9UQ90 795 aa30.23■■■□□ 2.43
SEMA3B-205ENST00000434030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.21■■■□□ 2.43
SEMA3B-205ENST00000434030 IGSF1Q8N6C5 1336 aa30.21■■■□□ 2.43
SEMA3B-205ENST00000434030 NKX1-1Q15270 411 aaPredicted RBP30.19■■■□□ 2.42
SEMA3B-205ENST00000434030 KCNQ4P56696 695 aa30.18■■■□□ 2.42
SEMA3B-205ENST00000434030 QSER1Q2KHR3 1735 aa30.18■■■□□ 2.42
SEMA3B-205ENST00000434030 ZNF827Q17R98 1081 aa30.17■■■□□ 2.42
SEMA3B-205ENST00000434030 TUBGCP6Q96RT7 1819 aa30.17■■■□□ 2.42
SEMA3B-205ENST00000434030 ZBTB7AO95365 584 aa30.16■■■□□ 2.42
SEMA3B-205ENST00000434030 MPRIPQ6WCQ1 1025 aa30.16■■■□□ 2.42
SEMA3B-205ENST00000434030 AKT1S1Q96B36 256 aa30.15■■■□□ 2.42
SEMA3B-205ENST00000434030 CC2D1BQ5T0F9 858 aaKnown RBP30.14■■■□□ 2.42
SEMA3B-205ENST00000434030 PLEKHG2Q9H7P9 1386 aa30.14■■■□□ 2.41
SEMA3B-205ENST00000434030 TAF1LQ8IZX4 1826 aa30.13■■■□□ 2.41
SEMA3B-205ENST00000434030 IFNL2Q8IZJ0 200 aa30.13■■■□□ 2.41
SEMA3B-205ENST00000434030 CCNL1Q9UK58 526 aaPredicted RBP30.13■■■□□ 2.41
SEMA3B-205ENST00000434030 PHKG2P15735 406 aa30.12■■■□□ 2.41
SEMA3B-205ENST00000434030 PPP1R1BQ9UD71 204 aaPredicted RBP30.12■■■□□ 2.41
SEMA3B-205ENST00000434030 ATF5Q9Y2D1 282 aaPredicted RBP30.12■■■□□ 2.41
SEMA3B-205ENST00000434030 IL13P35225 146 aa30.1■■■□□ 2.41
SEMA3B-205ENST00000434030 MTHFSP49914 203 aa30.1■■■□□ 2.41
SEMA3B-205ENST00000434030 C5P01031 1676 aa30.09■■■□□ 2.41
SEMA3B-205ENST00000434030 PTGER2P43116 358 aa30.09■■■□□ 2.41
SEMA3B-205ENST00000434030 PIGBQ92521 554 aa30.09■■■□□ 2.41
SEMA3B-205ENST00000434030 MTFR1LQ9H019 292 aa30.09■■■□□ 2.41
SEMA3B-205ENST00000434030 NPC1L1Q9UHC9 1359 aa30.08■■■□□ 2.41
SEMA3B-205ENST00000434030 AEBP1Q8IUX7 1158 aa30.08■■■□□ 2.41
SEMA3B-205ENST00000434030 PALLDQ8WX93 1383 aa30.07■■■□□ 2.4
SEMA3B-205ENST00000434030 PLEKHO1Q53GL0 409 aaPredicted RBP30.06■■■□□ 2.4
SEMA3B-205ENST00000434030 SULT6B1Q6IMI4 303 aa30.06■■■□□ 2.4
SEMA3B-205ENST00000434030 SMARCC1Q92922 1105 aaPredicted RBP30.05■■■□□ 2.4
SEMA3B-205ENST00000434030 TFCP2L1Q9NZI6 479 aa30.05■■■□□ 2.4
SEMA3B-205ENST00000434030 PNPLA7Q6ZV29 1317 aa30.04■■■□□ 2.4
SEMA3B-205ENST00000434030 KDRP35968 1356 aa30.03■■■□□ 2.4
SEMA3B-205ENST00000434030 CNGB1Q14028 1251 aaPredicted RBP30.03■■■□□ 2.4
SEMA3B-205ENST00000434030 AMOTQ4VCS5 1084 aa30.03■■■□□ 2.4
SEMA3B-205ENST00000434030 TMOD3Q9NYL9 352 aa30.03■■■□□ 2.4
SEMA3B-205ENST00000434030 SGIP1Q9BQI5 828 aa30.02■■■□□ 2.4
SEMA3B-205ENST00000434030 COL24A1Q17RW2 1714 aa30.01■■■□□ 2.39
SEMA3B-205ENST00000434030 ZNF530Q6P9A1 599 aaPredicted RBP30■■■□□ 2.39
SEMA3B-205ENST00000434030 HSP90AB1P08238 724 aaKnown RBP29.99■■■□□ 2.39
SEMA3B-205ENST00000434030 SLC16A10Q8TF71 515 aa29.99■■■□□ 2.39
SEMA3B-205ENST00000434030 HMGB2P26583 209 aaKnown RBP29.98■■■□□ 2.39
SEMA3B-205ENST00000434030 DCAF5Q96JK2 942 aa29.98■■■□□ 2.39
SEMA3B-205ENST00000434030 ASAP1Q9ULH1 1129 aa29.98■■■□□ 2.39
SEMA3B-205ENST00000434030 VIRMAQ69YN4 1812 aaKnown RBP29.98■■■□□ 2.39
SEMA3B-205ENST00000434030 C4BP0C0L5 1744 aa29.97■■■□□ 2.39
SEMA3B-205ENST00000434030 ERVV-2B6SEH9 535 aa29.96■■■□□ 2.39
SEMA3B-205ENST00000434030 DIAPH1O60610 1272 aaKnown RBP29.96■■■□□ 2.39
SEMA3B-205ENST00000434030 SCN11AQ9UI33 1791 aa29.95■■■□□ 2.39
SEMA3B-205ENST00000434030 KDM6AO15550 1401 aaPredicted RBP29.95■■■□□ 2.38
SEMA3B-205ENST00000434030 UBR3Q6ZT12 1888 aa29.94■■■□□ 2.38
SEMA3B-205ENST00000434030 C1orf141Q5JVX7 400 aa29.94■■■□□ 2.38
SEMA3B-205ENST00000434030 ATG3Q9NT62 314 aa29.94■■■□□ 2.38
SEMA3B-205ENST00000434030 LOC102724428A0A0B4J2F2 783 aa29.93■■■□□ 2.38
SEMA3B-205ENST00000434030 HMOX1P09601 288 aa29.93■■■□□ 2.38
SEMA3B-205ENST00000434030 SIK1P57059 783 aa29.93■■■□□ 2.38
SEMA3B-205ENST00000434030 COL23A1Q86Y22 540 aaPredicted RBP29.93■■■□□ 2.38
SEMA3B-205ENST00000434030 ARXQ96QS3 562 aa29.91■■■□□ 2.38
SEMA3B-205ENST00000434030 COL3A1P02461 1466 aaPredicted RBP29.91■■■□□ 2.38
SEMA3B-205ENST00000434030 FHDC1Q9C0D6 1143 aaPredicted RBP29.9■■■□□ 2.38
SEMA3B-205ENST00000434030 MSH5O43196 834 aa29.89■■■□□ 2.38
SEMA3B-205ENST00000434030 CABP4P57796 275 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms