RNA–Protein interactions for RNA: ENST00000433927.1

ELL3-202, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 5

Gene ELL3, Length 792 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-202ENST00000433927 NBPF4Q96M43 638 aa28.25■■■□□ 2.11
ELL3-202ENST00000433927 LRRC4BQ9NT99 713 aa28.25■■■□□ 2.11
ELL3-202ENST00000433927 MEGF6O75095 1541 aa28.23■■■□□ 2.11
ELL3-202ENST00000433927 RAPGEF4Q8WZA2 1011 aa28.23■■■□□ 2.11
ELL3-202ENST00000433927 ZNF827Q17R98 1081 aa28.22■■■□□ 2.11
ELL3-202ENST00000433927 KIF24Q5T7B8 1368 aa28.22■■■□□ 2.11
ELL3-202ENST00000433927 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
ELL3-202ENST00000433927 SHANK3Q9BYB0 1731 aa28.21■■■□□ 2.11
ELL3-202ENST00000433927 INSRP06213 1382 aa28.21■■■□□ 2.11
ELL3-202ENST00000433927 FLT4P35916 1363 aa28.21■■■□□ 2.11
ELL3-202ENST00000433927 CLSPNQ9HAW4 1339 aa28.2■■■□□ 2.11
ELL3-202ENST00000433927 USHBP1Q8N6Y0 703 aa28.2■■■□□ 2.1
ELL3-202ENST00000433927 SGIP1Q9BQI5 828 aa28.2■■■□□ 2.1
ELL3-202ENST00000433927 TATP17735 454 aaPredicted RBP28.19■■■□□ 2.1
ELL3-202ENST00000433927 HSP90AB2PQ58FF8 381 aa28.19■■■□□ 2.1
ELL3-202ENST00000433927 AKT1S1Q96B36 256 aa28.19■■■□□ 2.1
ELL3-202ENST00000433927 FHDC1Q9C0D6 1143 aaPredicted RBP28.19■■■□□ 2.1
ELL3-202ENST00000433927 SYT17Q9BSW7 474 aa28.18■■■□□ 2.1
ELL3-202ENST00000433927 CARD14Q9BXL6 1004 aa28.18■■■□□ 2.1
ELL3-202ENST00000433927 ARXQ96QS3 562 aa28.17■■■□□ 2.1
ELL3-202ENST00000433927 NSD3Q9BZ95 1437 aa28.17■■■□□ 2.1
ELL3-202ENST00000433927 SLC16A10Q8TF71 515 aa28.16■■■□□ 2.1
ELL3-202ENST00000433927 QSER1Q2KHR3 1735 aa28.15■■■□□ 2.1
ELL3-202ENST00000433927 NSD2O96028 1365 aa28.15■■■□□ 2.1
ELL3-202ENST00000433927 PCGF6Q9BYE7 350 aa28.15■■■□□ 2.1
ELL3-202ENST00000433927 TFCP2L1Q9NZI6 479 aa28.15■■■□□ 2.1
ELL3-202ENST00000433927 LY75O60449 1722 aa28.15■■■□□ 2.1
ELL3-202ENST00000433927 PCDH11XQ9BZA7 1347 aa28.13■■■□□ 2.09
ELL3-202ENST00000433927 PCDH11YQ9BZA8 1340 aa28.13■■■□□ 2.09
ELL3-202ENST00000433927 KCNQ4P56696 695 aa28.12■■■□□ 2.09
ELL3-202ENST00000433927 CCNL1Q9UK58 526 aaPredicted RBP28.12■■■□□ 2.09
ELL3-202ENST00000433927 EMILIN1Q9Y6C2 1016 aa28.11■■■□□ 2.09
ELL3-202ENST00000433927 PNPLA7Q6ZV29 1317 aa28.1■■■□□ 2.09
ELL3-202ENST00000433927 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
ELL3-202ENST00000433927 POLD1P28340 1107 aa28.09■■■□□ 2.09
ELL3-202ENST00000433927 MAP3K5Q99683 1374 aa28.09■■■□□ 2.09
ELL3-202ENST00000433927 HMGB2P26583 209 aaKnown RBP28.08■■■□□ 2.09
ELL3-202ENST00000433927 POLR3GLQ9BT43 218 aa28.06■■■□□ 2.08
ELL3-202ENST00000433927 TUBGCP6Q96RT7 1819 aa28.06■■■□□ 2.08
ELL3-202ENST00000433927 MAP2P11137 1827 aaKnown RBP28.04■■■□□ 2.08
ELL3-202ENST00000433927 WASHC2AQ641Q2 1341 aa28.04■■■□□ 2.08
ELL3-202ENST00000433927 UTRNP46939 3433 aa28.04■■■□□ 2.08
ELL3-202ENST00000433927 COL24A1Q17RW2 1714 aa28.02■■■□□ 2.08
ELL3-202ENST00000433927 ANKRD26Q9UPS8 1709 aa28.02■■■□□ 2.08
ELL3-202ENST00000433927 CYP27B1O15528 508 aa28.02■■■□□ 2.08
ELL3-202ENST00000433927 MPRIPQ6WCQ1 1025 aa28.02■■■□□ 2.08
ELL3-202ENST00000433927 SPG7Q9UQ90 795 aa28.01■■■□□ 2.07
ELL3-202ENST00000433927 MSH5O43196 834 aa28■■■□□ 2.07
ELL3-202ENST00000433927 KLHL34Q8N239 644 aa28■■■□□ 2.07
ELL3-202ENST00000433927 PKD1L3Q7Z443 1732 aa28■■■□□ 2.07
ELL3-202ENST00000433927 NCAPD2Q15021 1401 aa28■■■□□ 2.07
ELL3-202ENST00000433927 EIF4G2P78344 907 aaKnown RBP eCLIP27.99■■■□□ 2.07
ELL3-202ENST00000433927 PALLDQ8WX93 1383 aa27.99■■■□□ 2.07
ELL3-202ENST00000433927 CHD4Q14839 1912 aa27.98■■■□□ 2.07
ELL3-202ENST00000433927 SMARCC1Q92922 1105 aaPredicted RBP27.98■■■□□ 2.07
ELL3-202ENST00000433927 EYA1Q99502 592 aa27.97■■■□□ 2.07
ELL3-202ENST00000433927 POLKQ9UBT6 870 aa27.97■■■□□ 2.07
ELL3-202ENST00000433927 C5P01031 1676 aa27.97■■■□□ 2.07
ELL3-202ENST00000433927 ITGB4P16144 1822 aa27.97■■■□□ 2.07
ELL3-202ENST00000433927 GPR162Q16538 588 aa27.96■■■□□ 2.07
ELL3-202ENST00000433927 COL23A1Q86Y22 540 aaPredicted RBP27.96■■■□□ 2.07
ELL3-202ENST00000433927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.96■■■□□ 2.07
ELL3-202ENST00000433927 NKX1-1Q15270 411 aaPredicted RBP27.95■■■□□ 2.06
ELL3-202ENST00000433927 FLAD1Q8NFF5 587 aa27.94■■■□□ 2.06
ELL3-202ENST00000433927 TOGARAM1Q9Y4F4 1720 aa27.94■■■□□ 2.06
ELL3-202ENST00000433927 TNNT2P45379 298 aaPredicted RBP27.93■■■□□ 2.06
ELL3-202ENST00000433927 TAF1LQ8IZX4 1826 aa27.92■■■□□ 2.06
ELL3-202ENST00000433927 HSPA5P11021 654 aaKnown RBP27.92■■■□□ 2.06
ELL3-202ENST00000433927 PIGBQ92521 554 aa27.91■■■□□ 2.06
ELL3-202ENST00000433927 IFNL2Q8IZJ0 200 aa27.9■■■□□ 2.06
ELL3-202ENST00000433927 ZNF784Q8NCA9 323 aaPredicted RBP27.9■■■□□ 2.06
ELL3-202ENST00000433927 CCER1Q8TC90 406 aaPredicted RBP27.9■■■□□ 2.06
ELL3-202ENST00000433927 PANK3Q9H999 370 aa27.9■■■□□ 2.06
ELL3-202ENST00000433927 EIF4A2Q14240 407 aaKnown RBP27.89■■■□□ 2.06
ELL3-202ENST00000433927 AK7Q96M32 723 aa27.88■■■□□ 2.05
ELL3-202ENST00000433927 TMOD3Q9NYL9 352 aa27.88■■■□□ 2.05
ELL3-202ENST00000433927 PELP1Q8IZL8 1130 aaKnown RBP27.87■■■□□ 2.05
ELL3-202ENST00000433927 C4BP0C0L5 1744 aa27.87■■■□□ 2.05
ELL3-202ENST00000433927 PHKG2P15735 406 aa27.86■■■□□ 2.05
ELL3-202ENST00000433927 MSL1Q68DK7 614 aa27.86■■■□□ 2.05
ELL3-202ENST00000433927 NLGN2Q8NFZ4 835 aa27.86■■■□□ 2.05
ELL3-202ENST00000433927 PLEKHG2Q9H7P9 1386 aa27.86■■■□□ 2.05
ELL3-202ENST00000433927 LOC102724428A0A0B4J2F2 783 aa27.83■■■□□ 2.05
ELL3-202ENST00000433927 SIK1P57059 783 aa27.83■■■□□ 2.05
ELL3-202ENST00000433927 GOLGB1Q14789 3259 aaKnown RBP27.81■■■□□ 2.04
ELL3-202ENST00000433927 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
ELL3-202ENST00000433927 ASAP1Q9ULH1 1129 aa27.8■■■□□ 2.04
ELL3-202ENST00000433927 UBR3Q6ZT12 1888 aa27.79■■■□□ 2.04
ELL3-202ENST00000433927 GRIN3BO60391 1043 aa27.79■■■□□ 2.04
ELL3-202ENST00000433927 MORC1Q86VD1 984 aa27.79■■■□□ 2.04
ELL3-202ENST00000433927 CD2APQ9Y5K6 639 aa27.79■■■□□ 2.04
ELL3-202ENST00000433927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.78■■■□□ 2.04
ELL3-202ENST00000433927 PHF14O94880 888 aa27.78■■■□□ 2.04
ELL3-202ENST00000433927 HSP90AB1P08238 724 aaKnown RBP27.78■■■□□ 2.04
ELL3-202ENST00000433927 SSFA2P28290 1259 aa27.78■■■□□ 2.04
ELL3-202ENST00000433927 ATP6V1AP38606 617 aa27.77■■■□□ 2.04
ELL3-202ENST00000433927 PLEKHO1Q53GL0 409 aaPredicted RBP27.77■■■□□ 2.04
ELL3-202ENST00000433927 LINC00116Q8NCU8 138 aa27.77■■■□□ 2.04
ELL3-202ENST00000433927 KNSTRNQ9Y448 316 aa27.76■■■□□ 2.03
ELL3-202ENST00000433927 ERVV-2B6SEH9 535 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms