RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 NSD2O96028 1365 aa14.76□□□□□ -0.05
HOXD3-203ENST00000432796 RGPD5Q99666 1765 aa14.76□□□□□ -0.05
HOXD3-203ENST00000432796 PRIM1P49642 420 aaKnown RBP14.76□□□□□ -0.05
HOXD3-203ENST00000432796 NMRK2Q9NPI5 230 aa14.76□□□□□ -0.05
HOXD3-203ENST00000432796 QRICH2Q9H0J4 1663 aa14.75□□□□□ -0.05
HOXD3-203ENST00000432796 TTC21AQ8NDW8 1320 aa14.75□□□□□ -0.05
HOXD3-203ENST00000432796 FSTL1Q12841 308 aa14.75□□□□□ -0.05
HOXD3-203ENST00000432796 FLAD1Q8NFF5 587 aa14.75□□□□□ -0.05
HOXD3-203ENST00000432796 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
HOXD3-203ENST00000432796 CENPJQ9HC77 1338 aaPredicted RBP14.74□□□□□ -0.05
HOXD3-203ENST00000432796 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
HOXD3-203ENST00000432796 LY75O60449 1722 aa14.73□□□□□ -0.05
HOXD3-203ENST00000432796 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
HOXD3-203ENST00000432796 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
HOXD3-203ENST00000432796 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
HOXD3-203ENST00000432796 USP47Q96K76 1375 aa14.72□□□□□ -0.05
HOXD3-203ENST00000432796 HSPA1AP0DMV8 641 aaKnown RBP14.71□□□□□ -0.05
HOXD3-203ENST00000432796 HSPA1BP0DMV9 641 aaKnown RBP14.71□□□□□ -0.05
HOXD3-203ENST00000432796 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
HOXD3-203ENST00000432796 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
HOXD3-203ENST00000432796 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
HOXD3-203ENST00000432796 USP31Q70CQ4 1352 aa14.66□□□□□ -0.06
HOXD3-203ENST00000432796 NBPF1Q3BBV0 1214 aa14.66□□□□□ -0.06
HOXD3-203ENST00000432796 DOT1LQ8TEK3 1739 aa14.66□□□□□ -0.06
HOXD3-203ENST00000432796 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
HOXD3-203ENST00000432796 KAT6BQ8WYB5 2073 aa14.65□□□□□ -0.06
HOXD3-203ENST00000432796 EVC2Q86UK5 1308 aa14.65□□□□□ -0.06
HOXD3-203ENST00000432796 PXDNLA1KZ92 1463 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 KTN1Q86UP2 1357 aaKnown RBP14.64□□□□□ -0.07
HOXD3-203ENST00000432796 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 AK7Q96M32 723 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 BCS1LQ9Y276 419 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 NSD3Q9BZ95 1437 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 C5P01031 1676 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 KDM2BQ8NHM5 1336 aa14.64□□□□□ -0.07
HOXD3-203ENST00000432796 USP54Q70EL1 1684 aa14.63□□□□□ -0.07
HOXD3-203ENST00000432796 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
HOXD3-203ENST00000432796 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
HOXD3-203ENST00000432796 ZCRB1Q8TBF4 217 aaKnown RBP14.63□□□□□ -0.07
HOXD3-203ENST00000432796 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
HOXD3-203ENST00000432796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
HOXD3-203ENST00000432796 TGFB2P61812 414 aa14.62□□□□□ -0.07
HOXD3-203ENST00000432796 C9orf131Q5VYM1 1079 aa14.62□□□□□ -0.07
HOXD3-203ENST00000432796 PHF14O94880 888 aa14.61□□□□□ -0.07
HOXD3-203ENST00000432796 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
HOXD3-203ENST00000432796 SSFA2P28290 1259 aa14.6□□□□□ -0.07
HOXD3-203ENST00000432796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
HOXD3-203ENST00000432796 IP6K1Q92551 441 aa14.59□□□□□ -0.07
HOXD3-203ENST00000432796 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
HOXD3-203ENST00000432796 C4BP0C0L5 1744 aa14.58□□□□□ -0.07
HOXD3-203ENST00000432796 MEGF6O75095 1541 aa14.58□□□□□ -0.08
HOXD3-203ENST00000432796 FCHSD2O94868 740 aa14.58□□□□□ -0.08
HOXD3-203ENST00000432796 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
HOXD3-203ENST00000432796 NME9Q86XW9 330 aa14.58□□□□□ -0.08
HOXD3-203ENST00000432796 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
HOXD3-203ENST00000432796 A0A0G2JLW4 131 aa14.57□□□□□ -0.08
HOXD3-203ENST00000432796 MMP10P09238 476 aa14.57□□□□□ -0.08
HOXD3-203ENST00000432796 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
HOXD3-203ENST00000432796 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
HOXD3-203ENST00000432796 LTN1O94822 1766 aa14.57□□□□□ -0.08
HOXD3-203ENST00000432796 FAM208AQ9UK61 1670 aaKnown RBP14.56□□□□□ -0.08
HOXD3-203ENST00000432796 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
HOXD3-203ENST00000432796 SMARCC1Q92922 1105 aaPredicted RBP14.55□□□□□ -0.08
HOXD3-203ENST00000432796 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
HOXD3-203ENST00000432796 KIAA1551Q9HCM1 1747 aa14.55□□□□□ -0.08
HOXD3-203ENST00000432796 DPEP1P16444 411 aa14.54□□□□□ -0.08
HOXD3-203ENST00000432796 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
HOXD3-203ENST00000432796 PRDM10Q9NQV6 1147 aa14.54□□□□□ -0.08
HOXD3-203ENST00000432796 RNF181Q9P0P0 153 aa14.54□□□□□ -0.08
HOXD3-203ENST00000432796 ROCK2O75116 1388 aaKnown RBP14.54□□□□□ -0.08
HOXD3-203ENST00000432796 TAF1LQ8IZX4 1826 aa14.53□□□□□ -0.08
HOXD3-203ENST00000432796 MON2Q7Z3U7 1717 aa14.53□□□□□ -0.08
HOXD3-203ENST00000432796 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
HOXD3-203ENST00000432796 L3MBTL2Q969R5 705 aa14.53□□□□□ -0.08
HOXD3-203ENST00000432796 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.08
HOXD3-203ENST00000432796 TNRC6CQ9HCJ0 1690 aaKnown RBP14.52□□□□□ -0.08
HOXD3-203ENST00000432796 TONSLQ96HA7 1378 aa14.52□□□□□ -0.08
HOXD3-203ENST00000432796 UBR3Q6ZT12 1888 aa14.52□□□□□ -0.09
HOXD3-203ENST00000432796 GNPATO15228 680 aa14.51□□□□□ -0.09
HOXD3-203ENST00000432796 LINC00116Q8NCU8 138 aa14.51□□□□□ -0.09
HOXD3-203ENST00000432796 DCAF5Q96JK2 942 aa14.51□□□□□ -0.09
HOXD3-203ENST00000432796 CCDC87Q9NVE4 849 aa14.51□□□□□ -0.09
HOXD3-203ENST00000432796 PKD1L3Q7Z443 1732 aa14.51□□□□□ -0.09
HOXD3-203ENST00000432796 PCDH11XQ9BZA7 1347 aa14.5□□□□□ -0.09
HOXD3-203ENST00000432796 PCDH11YQ9BZA8 1340 aa14.5□□□□□ -0.09
HOXD3-203ENST00000432796 ZC3H4Q9UPT8 1303 aaKnown RBP14.5□□□□□ -0.09
HOXD3-203ENST00000432796 FOXN1O15353 648 aa14.5□□□□□ -0.09
HOXD3-203ENST00000432796 CD163L1Q9NR16 1453 aa14.5□□□□□ -0.09
HOXD3-203ENST00000432796 N4BP2Q86UW6 1770 aaPredicted RBP14.5□□□□□ -0.09
HOXD3-203ENST00000432796 EDC4Q6P2E9 1401 aaKnown RBP14.49□□□□□ -0.09
HOXD3-203ENST00000432796 VEGFAP15692 232 aaPredicted RBP14.49□□□□□ -0.09
HOXD3-203ENST00000432796 KCNA3P22001 575 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 HOXC9P31274 260 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 NLGN1Q8N2Q7 840 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 RAPGEF4Q8WZA2 1011 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 SIN3AQ96ST3 1273 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
HOXD3-203ENST00000432796 MAP3K19Q56UN5 1328 aa14.48□□□□□ -0.09
HOXD3-203ENST00000432796 LOC102724428A0A0B4J2F2 783 aa14.48□□□□□ -0.09
HOXD3-203ENST00000432796 SIK1P57059 783 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms