RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
SMARCE1-205ENST00000431889 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
SMARCE1-205ENST00000431889 YY1P25490 414 aa19.9■□□□□ 0.78
SMARCE1-205ENST00000431889 ZCRB1Q8TBF4 217 aaKnown RBP19.89■□□□□ 0.77
SMARCE1-205ENST00000431889 FHDC1Q9C0D6 1143 aaPredicted RBP19.88■□□□□ 0.77
SMARCE1-205ENST00000431889 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
SMARCE1-205ENST00000431889 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
SMARCE1-205ENST00000431889 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
SMARCE1-205ENST00000431889 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
SMARCE1-205ENST00000431889 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
SMARCE1-205ENST00000431889 NSD2O96028 1365 aa19.85■□□□□ 0.77
SMARCE1-205ENST00000431889 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
SMARCE1-205ENST00000431889 GOLGB1Q14789 3259 aaKnown RBP19.85■□□□□ 0.77
SMARCE1-205ENST00000431889 KLHL34Q8N239 644 aa19.84■□□□□ 0.77
SMARCE1-205ENST00000431889 RTL1A6NKG5 1358 aa19.84■□□□□ 0.77
SMARCE1-205ENST00000431889 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
SMARCE1-205ENST00000431889 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.77
SMARCE1-205ENST00000431889 AKT1S1Q96B36 256 aa19.83■□□□□ 0.77
SMARCE1-205ENST00000431889 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
SMARCE1-205ENST00000431889 SYT17Q9BSW7 474 aa19.83■□□□□ 0.77
SMARCE1-205ENST00000431889 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
SMARCE1-205ENST00000431889 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
SMARCE1-205ENST00000431889 LY75O60449 1722 aa19.81■□□□□ 0.76
SMARCE1-205ENST00000431889 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
SMARCE1-205ENST00000431889 TNNT2P45379 298 aaPredicted RBP19.81■□□□□ 0.76
SMARCE1-205ENST00000431889 TFCP2L1Q9NZI6 479 aa19.81■□□□□ 0.76
SMARCE1-205ENST00000431889 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
SMARCE1-205ENST00000431889 ARXQ96QS3 562 aa19.8■□□□□ 0.76
SMARCE1-205ENST00000431889 INSRP06213 1382 aa19.79■□□□□ 0.76
SMARCE1-205ENST00000431889 FLT4P35916 1363 aa19.79■□□□□ 0.76
SMARCE1-205ENST00000431889 MSH5O43196 834 aa19.79■□□□□ 0.76
SMARCE1-205ENST00000431889 CCNL1Q9UK58 526 aaPredicted RBP19.79■□□□□ 0.76
SMARCE1-205ENST00000431889 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
SMARCE1-205ENST00000431889 SLC27A3Q5K4L6 730 aa19.78■□□□□ 0.76
SMARCE1-205ENST00000431889 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
SMARCE1-205ENST00000431889 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.76
SMARCE1-205ENST00000431889 CYP27B1O15528 508 aa19.76■□□□□ 0.75
SMARCE1-205ENST00000431889 SMIM5Q71RC9 77 aa19.76■□□□□ 0.75
SMARCE1-205ENST00000431889 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
SMARCE1-205ENST00000431889 ITGB4P16144 1822 aa19.74■□□□□ 0.75
SMARCE1-205ENST00000431889 QSER1Q2KHR3 1735 aa19.74■□□□□ 0.75
SMARCE1-205ENST00000431889 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
SMARCE1-205ENST00000431889 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
SMARCE1-205ENST00000431889 PCDH11XQ9BZA7 1347 aa19.73■□□□□ 0.75
SMARCE1-205ENST00000431889 PCDH11YQ9BZA8 1340 aa19.73■□□□□ 0.75
SMARCE1-205ENST00000431889 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
SMARCE1-205ENST00000431889 EYA1Q99502 592 aa19.72■□□□□ 0.75
SMARCE1-205ENST00000431889 C5P01031 1676 aa19.72■□□□□ 0.75
SMARCE1-205ENST00000431889 CGNL1Q0VF96 1302 aa19.72■□□□□ 0.75
SMARCE1-205ENST00000431889 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
SMARCE1-205ENST00000431889 POLKQ9UBT6 870 aa19.71■□□□□ 0.75
SMARCE1-205ENST00000431889 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
SMARCE1-205ENST00000431889 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
SMARCE1-205ENST00000431889 PKD1L3Q7Z443 1732 aa19.7■□□□□ 0.74
SMARCE1-205ENST00000431889 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
SMARCE1-205ENST00000431889 POLD1P28340 1107 aa19.7■□□□□ 0.74
SMARCE1-205ENST00000431889 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
SMARCE1-205ENST00000431889 GPR162Q16538 588 aa19.69■□□□□ 0.74
SMARCE1-205ENST00000431889 AMIGO3Q86WK7 504 aa19.69■□□□□ 0.74
SMARCE1-205ENST00000431889 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
SMARCE1-205ENST00000431889 PANK3Q9H999 370 aa19.68■□□□□ 0.74
SMARCE1-205ENST00000431889 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
SMARCE1-205ENST00000431889 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
SMARCE1-205ENST00000431889 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMARCE1-205ENST00000431889 PIGBQ92521 554 aa19.67■□□□□ 0.74
SMARCE1-205ENST00000431889 PHF14O94880 888 aa19.66■□□□□ 0.74
SMARCE1-205ENST00000431889 EIF4A2Q14240 407 aaKnown RBP19.66■□□□□ 0.74
SMARCE1-205ENST00000431889 SLC16A10Q8TF71 515 aa19.66■□□□□ 0.74
SMARCE1-205ENST00000431889 COL24A1Q17RW2 1714 aa19.66■□□□□ 0.74
SMARCE1-205ENST00000431889 ZNF784Q8NCA9 323 aaPredicted RBP19.65■□□□□ 0.74
SMARCE1-205ENST00000431889 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
SMARCE1-205ENST00000431889 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
SMARCE1-205ENST00000431889 CHD4Q14839 1912 aa19.65■□□□□ 0.74
SMARCE1-205ENST00000431889 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
SMARCE1-205ENST00000431889 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
SMARCE1-205ENST00000431889 ASAP1Q9ULH1 1129 aa19.63■□□□□ 0.73
SMARCE1-205ENST00000431889 NCAPD2Q15021 1401 aa19.63■□□□□ 0.73
SMARCE1-205ENST00000431889 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
SMARCE1-205ENST00000431889 PHKG2P15735 406 aa19.61■□□□□ 0.73
SMARCE1-205ENST00000431889 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
SMARCE1-205ENST00000431889 AK7Q96M32 723 aa19.61■□□□□ 0.73
SMARCE1-205ENST00000431889 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
SMARCE1-205ENST00000431889 ITPK1Q13572 414 aa19.59■□□□□ 0.73
SMARCE1-205ENST00000431889 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
SMARCE1-205ENST00000431889 UBR3Q6ZT12 1888 aa19.59■□□□□ 0.73
SMARCE1-205ENST00000431889 YBX3P16989 372 aaKnown RBP eCLIP19.58■□□□□ 0.732e-7■■□□□ 12.5
SMARCE1-205ENST00000431889 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.73
SMARCE1-205ENST00000431889 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.73
SMARCE1-205ENST00000431889 LOC102724428A0A0B4J2F2 783 aa19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 SIK1P57059 783 aa19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
SMARCE1-205ENST00000431889 ATP6V1AP38606 617 aa19.56■□□□□ 0.72
SMARCE1-205ENST00000431889 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
SMARCE1-205ENST00000431889 GNPATO15228 680 aa19.53■□□□□ 0.72
SMARCE1-205ENST00000431889 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
SMARCE1-205ENST00000431889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.723e-7■■■□□ 16.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms