RNA–Protein interactions for RNA: ENST00000431519.6

CDV3-203, Transcript of CDV3 homolog, humanhuman

TSL 1 (best) BASIC

Gene CDV3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-203ENST00000431519 SYTL4Q96C24 671 aaPredicted RBP42.88■■■■■ 4.45
CDV3-203ENST00000431519 SHANK3Q9BYB0 1731 aa42.87■■■■■ 4.45
CDV3-203ENST00000431519 FLT4P35916 1363 aa42.87■■■■■ 4.45
CDV3-203ENST00000431519 EMILIN1Q9Y6C2 1016 aa42.85■■■■■ 4.45
CDV3-203ENST00000431519 INSRP06213 1382 aa42.85■■■■■ 4.45
CDV3-203ENST00000431519 DOT1LQ8TEK3 1739 aa42.84■■■■■ 4.45
CDV3-203ENST00000431519 PRIM1P49642 420 aaKnown RBP42.83■■■■■ 4.45
CDV3-203ENST00000431519 RAPGEF4Q8WZA2 1011 aa42.82■■■■■ 4.45
CDV3-203ENST00000431519 ATF5Q9Y2D1 282 aaPredicted RBP42.82■■■■■ 4.45
CDV3-203ENST00000431519 LRRC4BQ9NT99 713 aa42.81■■■■■ 4.44
CDV3-203ENST00000431519 PAPPAQ13219 1627 aa42.8■■■■■ 4.44
CDV3-203ENST00000431519 PPM1GO15355 546 aaPredicted RBP42.8■■■■■ 4.44
CDV3-203ENST00000431519 KIF24Q5T7B8 1368 aa42.79■■■■■ 4.44
CDV3-203ENST00000431519 HSPA5P11021 654 aaKnown RBP42.79■■■■■ 4.44
CDV3-203ENST00000431519 EIF4G2P78344 907 aaKnown RBP eCLIP42.79■■■■■ 4.44
CDV3-203ENST00000431519 CGNL1Q0VF96 1302 aa42.77■■■■■ 4.44
CDV3-203ENST00000431519 TATP17735 454 aaPredicted RBP42.77■■■■■ 4.44
CDV3-203ENST00000431519 ZNF827Q17R98 1081 aa42.75■■■■■ 4.43
CDV3-203ENST00000431519 PTGER2P43116 358 aa42.72■■■■■ 4.43
CDV3-203ENST00000431519 KCNQ4P56696 695 aa42.72■■■■■ 4.43
CDV3-203ENST00000431519 NSD2O96028 1365 aa42.72■■■■■ 4.43
CDV3-203ENST00000431519 SLC27A3Q5K4L6 730 aa42.68■■■■■ 4.42
CDV3-203ENST00000431519 MTFR1LQ9H019 292 aa42.68■■■■■ 4.42
CDV3-203ENST00000431519 MAP2P11137 1827 aaKnown RBP42.67■■■■■ 4.42
CDV3-203ENST00000431519 ANKRD26Q9UPS8 1709 aa42.66■■■■■ 4.42
CDV3-203ENST00000431519 TNNT2P45379 298 aaPredicted RBP42.66■■■■■ 4.42
CDV3-203ENST00000431519 PCDH11XQ9BZA7 1347 aa42.65■■■■■ 4.42
CDV3-203ENST00000431519 PCDH11YQ9BZA8 1340 aa42.65■■■■■ 4.42
CDV3-203ENST00000431519 AKT1S1Q96B36 256 aa42.63■■■■■ 4.41
CDV3-203ENST00000431519 WASHC2AQ641Q2 1341 aa42.62■■■■■ 4.41
CDV3-203ENST00000431519 LY75O60449 1722 aa42.61■■■■■ 4.41
CDV3-203ENST00000431519 PANK3Q9H999 370 aa42.61■■■■■ 4.41
CDV3-203ENST00000431519 POLKQ9UBT6 870 aa42.61■■■■■ 4.41
CDV3-203ENST00000431519 CYP27B1O15528 508 aa42.58■■■■■ 4.41
CDV3-203ENST00000431519 CCNL1Q9UK58 526 aaPredicted RBP42.58■■■■■ 4.41
CDV3-203ENST00000431519 DCAF8L1A6NGE4 600 aa42.57■■■■■ 4.41
CDV3-203ENST00000431519 EYA1Q99502 592 aa42.56■■■■■ 4.4
CDV3-203ENST00000431519 SGIP1Q9BQI5 828 aa42.56■■■■■ 4.4
CDV3-203ENST00000431519 TFCP2L1Q9NZI6 479 aa42.55■■■■■ 4.4
CDV3-203ENST00000431519 FHDC1Q9C0D6 1143 aaPredicted RBP42.54■■■■■ 4.4
CDV3-203ENST00000431519 PKD1L3Q7Z443 1732 aa42.54■■■■■ 4.4
CDV3-203ENST00000431519 NCAPD2Q15021 1401 aa42.54■■■■■ 4.4
CDV3-203ENST00000431519 PNPLA7Q6ZV29 1317 aa42.52■■■■■ 4.4
CDV3-203ENST00000431519 MPRIPQ6WCQ1 1025 aa42.52■■■■■ 4.4
CDV3-203ENST00000431519 TUBGCP6Q96RT7 1819 aa42.52■■■■■ 4.4
CDV3-203ENST00000431519 QSER1Q2KHR3 1735 aa42.5■■■■■ 4.39
CDV3-203ENST00000431519 TOGARAM1Q9Y4F4 1720 aa42.49■■■■■ 4.39
CDV3-203ENST00000431519 ARXQ96QS3 562 aa42.49■■■■■ 4.39
CDV3-203ENST00000431519 SYT17Q9BSW7 474 aa42.48■■■■■ 4.39
CDV3-203ENST00000431519 SPG7Q9UQ90 795 aa42.48■■■■■ 4.39
CDV3-203ENST00000431519 EIF4A2Q14240 407 aaKnown RBP42.47■■■■■ 4.39
CDV3-203ENST00000431519 YY1P25490 414 aa42.45■■■■■ 4.39
CDV3-203ENST00000431519 PALLDQ8WX93 1383 aa42.43■■■■■ 4.38
CDV3-203ENST00000431519 SLC16A10Q8TF71 515 aa42.43■■■■■ 4.38
CDV3-203ENST00000431519 ITGB4P16144 1822 aa42.43■■■■■ 4.38
CDV3-203ENST00000431519 MSH5O43196 834 aa42.39■■■■■ 4.38
CDV3-203ENST00000431519 MORC1Q86VD1 984 aa42.38■■■■■ 4.37
CDV3-203ENST00000431519 C5P01031 1676 aa42.38■■■■■ 4.37
CDV3-203ENST00000431519 NKX1-1Q15270 411 aaPredicted RBP42.37■■■■■ 4.37
CDV3-203ENST00000431519 POLD1P28340 1107 aa42.36■■■■■ 4.37
CDV3-203ENST00000431519 KLHL34Q8N239 644 aa42.36■■■■■ 4.37
CDV3-203ENST00000431519 PIGBQ92521 554 aa42.36■■■■■ 4.37
CDV3-203ENST00000431519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP42.35■■■■■ 4.371e-6■■■□□ 16.4
CDV3-203ENST00000431519 KNSTRNQ9Y448 316 aa42.34■■■■■ 4.37
CDV3-203ENST00000431519 COL23A1Q86Y22 540 aaPredicted RBP42.33■■■■■ 4.37
CDV3-203ENST00000431519 PHKG2P15735 406 aa42.32■■■■■ 4.37
CDV3-203ENST00000431519 IFNL2Q8IZJ0 200 aa42.32■■■■■ 4.37
CDV3-203ENST00000431519 SMARCC1Q92922 1105 aaPredicted RBP42.32■■■■■ 4.37
CDV3-203ENST00000431519 IGSF1Q8N6C5 1336 aa42.31■■■■■ 4.36
CDV3-203ENST00000431519 TAF1LQ8IZX4 1826 aa42.3■■■■■ 4.36
CDV3-203ENST00000431519 COL24A1Q17RW2 1714 aa42.29■■■■■ 4.36
CDV3-203ENST00000431519 KIF7Q2M1P5 1343 aa42.28■■■■■ 4.36
CDV3-203ENST00000431519 TMOD3Q9NYL9 352 aa42.28■■■■■ 4.36
CDV3-203ENST00000431519 MAP3K5Q99683 1374 aa42.27■■■■■ 4.36
CDV3-203ENST00000431519 MSL1Q68DK7 614 aa42.25■■■■■ 4.35
CDV3-203ENST00000431519 C4BP0C0L5 1744 aa42.23■■■■■ 4.35
CDV3-203ENST00000431519 ASAP1Q9ULH1 1129 aa42.22■■■■■ 4.35
CDV3-203ENST00000431519 AK7Q96M32 723 aa42.21■■■■■ 4.35
CDV3-203ENST00000431519 HMGB2P26583 209 aaKnown RBP42.2■■■■■ 4.35
CDV3-203ENST00000431519 UTRNP46939 3433 aa42.19■■■■■ 4.34
CDV3-203ENST00000431519 AEBP1Q8IUX7 1158 aa42.19■■■■■ 4.34
CDV3-203ENST00000431519 LOC102724428A0A0B4J2F2 783 aa42.18■■■■■ 4.34
CDV3-203ENST00000431519 SIK1P57059 783 aa42.18■■■■■ 4.34
CDV3-203ENST00000431519 AMER1Q5JTC6 1135 aaPredicted RBP42.18■■■■■ 4.34
CDV3-203ENST00000431519 PLEKHO1Q53GL0 409 aaPredicted RBP42.17■■■■■ 4.34
CDV3-203ENST00000431519 PLEKHG2Q9H7P9 1386 aa42.16■■■■■ 4.34
CDV3-203ENST00000431519 SMIM5Q71RC9 77 aa42.16■■■■■ 4.34
CDV3-203ENST00000431519 AMIGO3Q86WK7 504 aa42.16■■■■■ 4.34
CDV3-203ENST00000431519 PHF14O94880 888 aa42.15■■■■■ 4.34
CDV3-203ENST00000431519 FLAD1Q8NFF5 587 aa42.15■■■■■ 4.34
CDV3-203ENST00000431519 ZNF530Q6P9A1 599 aaPredicted RBP42.14■■■■■ 4.34
CDV3-203ENST00000431519 LINC00116Q8NCU8 138 aa42.14■■■■■ 4.34
CDV3-203ENST00000431519 NLGN2Q8NFZ4 835 aa42.14■■■■■ 4.34
CDV3-203ENST00000431519 GPR162Q16538 588 aa42.13■■■■■ 4.33
CDV3-203ENST00000431519 ATG3Q9NT62 314 aa42.13■■■■■ 4.33
CDV3-203ENST00000431519 PELP1Q8IZL8 1130 aaKnown RBP42.12■■■■■ 4.33
CDV3-203ENST00000431519 SULT6B1Q6IMI4 303 aa42.11■■■■■ 4.33
CDV3-203ENST00000431519 ATP6V1AP38606 617 aa42.1■■■■■ 4.33
CDV3-203ENST00000431519 ITPK1Q13572 414 aa42.1■■■■■ 4.33
CDV3-203ENST00000431519 UBR3Q6ZT12 1888 aa42.1■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms