RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ERVK-9P63128 1117 aa5.63□□□□□ -1.51
HMGB1P27-201ENST00000431429 AGERQ15109 404 aa5.63□□□□□ -1.51
HMGB1P27-201ENST00000431429 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
HMGB1P27-201ENST00000431429 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 GGCXP38435 758 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 GRM5P41594 1212 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 SEC13P55735 322 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 USP4Q13107 963 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 CCDC102BQ68D86 513 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 LIAT1Q6ZQX7 453 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 TAS1R3Q7RTX0 852 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 SIRT1Q96EB6 747 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 ZNF594Q96JF6 807 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 PCDHB11Q9Y5F2 797 aa5.62□□□□□ -1.51
HMGB1P27-201ENST00000431429 ERVH48-1M5A8F1 160 aa5.61□□□□□ -1.51
HMGB1P27-201ENST00000431429 ZBTB24O43167 697 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P27-201ENST00000431429 ATP2B4P23634 1241 aa5.61□□□□□ -1.51
HMGB1P27-201ENST00000431429 SCTRP47872 440 aa5.61□□□□□ -1.51
HMGB1P27-201ENST00000431429 CXXC1Q9P0U4 656 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P27-201ENST00000431429 TMEM229AB2RXF0 380 aa5.6□□□□□ -1.51
HMGB1P27-201ENST00000431429 RC3H1Q5TC82 1133 aaKnown RBP5.6□□□□□ -1.51
HMGB1P27-201ENST00000431429 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
HMGB1P27-201ENST00000431429 OSBPL3Q9H4L5 887 aa5.6□□□□□ -1.51
HMGB1P27-201ENST00000431429 SFI1A8K8P3 1242 aa5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 LILRA1O75019 489 aa5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 ARID4AP29374 1257 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 WEE1P30291 646 aa5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 SCNN1DP51172 638 aa5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 CCER1Q8TC90 406 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 MTMR7Q9Y216 660 aa5.59□□□□□ -1.51
HMGB1P27-201ENST00000431429 WNT7AO00755 349 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 ADH1CP00326 375 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 EPHA4P54764 986 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 CC2D2BQ6DHV5 1058 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 EHBP1Q8NDI1 1231 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 TLL2Q9Y6L7 1015 aa5.58□□□□□ -1.52
HMGB1P27-201ENST00000431429 SOWAHDA6NJG2 315 aa5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 CD2BP2O95400 341 aaKnown RBP5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 FSHRP23945 695 aa5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 NPM2Q86SE8 214 aaKnown RBP5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 ZNF358Q9NW07 568 aa5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 EGFL7Q9UHF1 273 aa5.57□□□□□ -1.52
HMGB1P27-201ENST00000431429 MYCP01106 439 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 NR3C2P08235 984 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 SCNN1AP37088 669 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 SERPINB4P48594 390 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 DHX9Q08211 1270 aaKnown RBP5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 NR5A1Q13285 461 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 ECM1Q16610 540 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 CCDC27Q2M243 656 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 NOM1Q5C9Z4 860 aaKnown RBP5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 POTEAQ6S8J7 498 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 DNAJC14Q6Y2X3 702 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 ZNF784Q8NCA9 323 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 COL26A1Q96A83 441 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 SLC4A9Q96Q91 983 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 TMPRSS4Q9NRS4 437 aa5.56□□□□□ -1.52
HMGB1P27-201ENST00000431429 PRMT3O60678 531 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 ADD1P35611 737 aaKnown RBP5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 FOXK2Q01167 660 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 MMRN1Q13201 1228 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 SPRYD7Q5W111 196 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 CCDC116Q8IYX3 515 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 TSEN2Q8NCE0 465 aaKnown RBP5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 MRGPRX2Q96LB1 330 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 PRIMPOLQ96LW4 560 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 ETNK1Q9HBU6 452 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 AMOTL2Q9Y2J4 779 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 HRH3Q9Y5N1 445 aa5.55□□□□□ -1.52
HMGB1P27-201ENST00000431429 C21orf2O43822 256 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 INHAP05111 366 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 IGFBP4P22692 258 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 SLC19A1P41440 591 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 FKBP5Q13451 457 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 MTFR1Q15390 333 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 PPP1R26Q5T8A7 1209 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 KDF1Q8NAX2 398 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 PURBQ96QR8 312 aaKnown RBP5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 KLF16Q9BXK1 252 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 PKD2L1Q9P0L9 805 aa5.54□□□□□ -1.52
HMGB1P27-201ENST00000431429 FOXO3O43524 673 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 STAU1O95793 577 aaKnown RBP5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 GNRH1P01148 92 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 GDF10P55107 478 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 RAB15P59190 212 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 PSME1Q06323 249 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 ZNF295-AS1Q8N0V1 137 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 STAG2Q8N3U4 1231 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 TRIM52Q96A61 297 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 CYLDQ9NQC7 956 aa5.53□□□□□ -1.52
HMGB1P27-201ENST00000431429 ICMTO60725 284 aa5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 NPR3P17342 541 aa5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 MYT1Q01538 1121 aa5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 FOXD4L5Q5VV16 416 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 CAPN12Q6ZSI9 719 aa5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 CYP2U1Q7Z449 544 aa5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 ZNF598Q86UK7 904 aaKnown RBP5.52□□□□□ -1.53
HMGB1P27-201ENST00000431429 GAS2L2Q8NHY3 880 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms