RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 MSH5O43196 834 aa23.93■■□□□ 1.42
LMBR1-206ENST00000430825 CCNL1Q9UK58 526 aaPredicted RBP23.93■■□□□ 1.42
LMBR1-206ENST00000430825 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
LMBR1-206ENST00000430825 LY75O60449 1722 aa23.92■■□□□ 1.42
LMBR1-206ENST00000430825 HMGB2P26583 209 aaKnown RBP23.91■■□□□ 1.42
LMBR1-206ENST00000430825 LTV1Q96GA3 475 aaPredicted RBP23.91■■□□□ 1.42
LMBR1-206ENST00000430825 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
LMBR1-206ENST00000430825 NSD2O96028 1365 aa23.91■■□□□ 1.42
LMBR1-206ENST00000430825 COL23A1Q86Y22 540 aaPredicted RBP23.9■■□□□ 1.42
LMBR1-206ENST00000430825 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
LMBR1-206ENST00000430825 SLC12A5Q9H2X9 1139 aa23.89■■□□□ 1.41
LMBR1-206ENST00000430825 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.41
LMBR1-206ENST00000430825 CD2APQ9Y5K6 639 aa23.89■■□□□ 1.41
LMBR1-206ENST00000430825 USP47Q96K76 1375 aa23.88■■□□□ 1.41
LMBR1-206ENST00000430825 DOT1LQ8TEK3 1739 aa23.87■■□□□ 1.41
LMBR1-206ENST00000430825 FLAD1Q8NFF5 587 aa23.86■■□□□ 1.41
LMBR1-206ENST00000430825 A0A1W2PP64 1363 aa23.86■■□□□ 1.41
LMBR1-206ENST00000430825 HSPA6P17066 643 aa23.85■■□□□ 1.41
LMBR1-206ENST00000430825 PUS7Q96PZ0 661 aaKnown RBP23.85■■□□□ 1.41
LMBR1-206ENST00000430825 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
LMBR1-206ENST00000430825 MSL1Q68DK7 614 aa23.84■■□□□ 1.41
LMBR1-206ENST00000430825 HOXC9P31274 260 aa23.83■■□□□ 1.41
LMBR1-206ENST00000430825 AMPHP49418 695 aa23.83■■□□□ 1.41
LMBR1-206ENST00000430825 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
LMBR1-206ENST00000430825 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
LMBR1-206ENST00000430825 COG3Q96JB2 828 aa23.82■■□□□ 1.4
LMBR1-206ENST00000430825 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
LMBR1-206ENST00000430825 MAP3K19Q56UN5 1328 aa23.82■■□□□ 1.4
LMBR1-206ENST00000430825 ADCY9O60503 1353 aa23.81■■□□□ 1.4
LMBR1-206ENST00000430825 MEGF6O75095 1541 aa23.8■■□□□ 1.4
LMBR1-206ENST00000430825 RTL1A6NKG5 1358 aa23.77■■□□□ 1.4
LMBR1-206ENST00000430825 ZNF526Q8TF50 670 aaPredicted RBP23.76■■□□□ 1.39
LMBR1-206ENST00000430825 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
LMBR1-206ENST00000430825 C5P01031 1676 aa23.76■■□□□ 1.39
LMBR1-206ENST00000430825 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
LMBR1-206ENST00000430825 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
LMBR1-206ENST00000430825 PALLDQ8WX93 1383 aa23.73■■□□□ 1.39
LMBR1-206ENST00000430825 RGPD2P0DJD1 1756 aa23.73■■□□□ 1.39
LMBR1-206ENST00000430825 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
LMBR1-206ENST00000430825 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
LMBR1-206ENST00000430825 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
LMBR1-206ENST00000430825 SMG6Q86US8 1419 aaKnown RBP23.72■■□□□ 1.39
LMBR1-206ENST00000430825 IGSF1Q8N6C5 1336 aa23.71■■□□□ 1.39
LMBR1-206ENST00000430825 FBLN1P23142 703 aa23.71■■□□□ 1.39
LMBR1-206ENST00000430825 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
LMBR1-206ENST00000430825 AK7Q96M32 723 aa23.71■■□□□ 1.39
LMBR1-206ENST00000430825 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
LMBR1-206ENST00000430825 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
LMBR1-206ENST00000430825 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
LMBR1-206ENST00000430825 TAF1LQ8IZX4 1826 aa23.68■■□□□ 1.38
LMBR1-206ENST00000430825 SLC24A1O60721 1099 aa23.68■■□□□ 1.38
LMBR1-206ENST00000430825 RRS1Q15050 365 aaKnown RBP23.67■■□□□ 1.38
LMBR1-206ENST00000430825 KIF3CO14782 793 aa23.66■■□□□ 1.38
LMBR1-206ENST00000430825 C4BP0C0L5 1744 aa23.66■■□□□ 1.38
LMBR1-206ENST00000430825 APLP1P51693 650 aa23.65■■□□□ 1.38
LMBR1-206ENST00000430825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.64■■□□□ 1.37
LMBR1-206ENST00000430825 PHF14O94880 888 aa23.64■■□□□ 1.37
LMBR1-206ENST00000430825 SSFA2P28290 1259 aa23.64■■□□□ 1.37
LMBR1-206ENST00000430825 WWC3Q9ULE0 1092 aa23.63■■□□□ 1.37
LMBR1-206ENST00000430825 CYP27B1O15528 508 aa23.62■■□□□ 1.37
LMBR1-206ENST00000430825 AMIGO3Q86WK7 504 aa23.62■■□□□ 1.37
LMBR1-206ENST00000430825 TESK2Q96S53 571 aa23.62■■□□□ 1.37
LMBR1-206ENST00000430825 INSRP06213 1382 aa23.62■■□□□ 1.37
LMBR1-206ENST00000430825 FYB1O15117 783 aa23.61■■□□□ 1.37
LMBR1-206ENST00000430825 UBR3Q6ZT12 1888 aa23.6■■□□□ 1.37
LMBR1-206ENST00000430825 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
LMBR1-206ENST00000430825 TOGARAM1Q9Y4F4 1720 aa23.59■■□□□ 1.37
LMBR1-206ENST00000430825 HSP90AB2PQ58FF8 381 aa23.59■■□□□ 1.37
LMBR1-206ENST00000430825 PIGBQ92521 554 aa23.59■■□□□ 1.37
LMBR1-206ENST00000430825 GGNBP2Q9H3C7 697 aa23.59■■□□□ 1.37
LMBR1-206ENST00000430825 FLT4P35916 1363 aa23.59■■□□□ 1.37
LMBR1-206ENST00000430825 TOMM70O94826 608 aa23.58■■□□□ 1.37
LMBR1-206ENST00000430825 CICQ96RK0 1608 aaPredicted RBP23.58■■□□□ 1.36
LMBR1-206ENST00000430825 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
LMBR1-206ENST00000430825 LOC102724428A0A0B4J2F2 783 aa23.57■■□□□ 1.36
LMBR1-206ENST00000430825 SIK1P57059 783 aa23.57■■□□□ 1.36
LMBR1-206ENST00000430825 ITGB4P16144 1822 aa23.56■■□□□ 1.36
LMBR1-206ENST00000430825 NKX1-1Q15270 411 aaPredicted RBP23.56■■□□□ 1.36
LMBR1-206ENST00000430825 SMIM5Q71RC9 77 aa23.56■■□□□ 1.36
LMBR1-206ENST00000430825 LINC00116Q8NCU8 138 aa23.55■■□□□ 1.36
LMBR1-206ENST00000430825 TGFB2P61812 414 aa23.54■■□□□ 1.36
LMBR1-206ENST00000430825 DNAJC5GQ8N7S2 189 aa23.54■■□□□ 1.36
LMBR1-206ENST00000430825 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
LMBR1-206ENST00000430825 TONSLQ96HA7 1378 aa23.53■■□□□ 1.36
LMBR1-206ENST00000430825 GNPATO15228 680 aa23.53■■□□□ 1.36
LMBR1-206ENST00000430825 MMP10P09238 476 aa23.52■■□□□ 1.36
LMBR1-206ENST00000430825 TMOD3Q9NYL9 352 aa23.52■■□□□ 1.36
LMBR1-206ENST00000430825 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
LMBR1-206ENST00000430825 PXDNLA1KZ92 1463 aa23.51■■□□□ 1.35
LMBR1-206ENST00000430825 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
LMBR1-206ENST00000430825 ATP6V1AP38606 617 aa23.5■■□□□ 1.35
LMBR1-206ENST00000430825 BCS1LQ9Y276 419 aa23.5■■□□□ 1.35
LMBR1-206ENST00000430825 ITPK1Q13572 414 aa23.49■■□□□ 1.35
LMBR1-206ENST00000430825 NLGN1Q8N2Q7 840 aa23.49■■□□□ 1.35
LMBR1-206ENST00000430825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.49■■□□□ 1.35
LMBR1-206ENST00000430825 TMF1P82094 1093 aa23.48■■□□□ 1.35
LMBR1-206ENST00000430825 ASAP1Q9ULH1 1129 aa23.48■■□□□ 1.35
LMBR1-206ENST00000430825 NCAPD2Q15021 1401 aa23.48■■□□□ 1.35
LMBR1-206ENST00000430825 KIF13BQ9NQT8 1826 aa23.47■■□□□ 1.35
LMBR1-206ENST00000430825 ARHGAP27Q6ZUM4 889 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms