RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
PHF1-205ENST00000428274 MEGF6O75095 1541 aa18.03■□□□□ 0.48
PHF1-205ENST00000428274 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
PHF1-205ENST00000428274 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
PHF1-205ENST00000428274 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
PHF1-205ENST00000428274 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
PHF1-205ENST00000428274 ZCRB1Q8TBF4 217 aaKnown RBP18.01■□□□□ 0.47
PHF1-205ENST00000428274 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
PHF1-205ENST00000428274 NCAPD2Q15021 1401 aa18■□□□□ 0.47
PHF1-205ENST00000428274 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
PHF1-205ENST00000428274 TXNRD1Q16881 649 aa18■□□□□ 0.47
PHF1-205ENST00000428274 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
PHF1-205ENST00000428274 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
PHF1-205ENST00000428274 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
PHF1-205ENST00000428274 BTAF1O14981 1849 aa17.98■□□□□ 0.47
PHF1-205ENST00000428274 RAPGEF4Q8WZA2 1011 aa17.98■□□□□ 0.47
PHF1-205ENST00000428274 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
PHF1-205ENST00000428274 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
PHF1-205ENST00000428274 EYA1Q99502 592 aa17.96■□□□□ 0.47
PHF1-205ENST00000428274 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
PHF1-205ENST00000428274 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
PHF1-205ENST00000428274 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
PHF1-205ENST00000428274 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
PHF1-205ENST00000428274 CYP27B1O15528 508 aa17.91■□□□□ 0.46
PHF1-205ENST00000428274 ZBTB7AO95365 584 aa17.91■□□□□ 0.46
PHF1-205ENST00000428274 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
PHF1-205ENST00000428274 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
PHF1-205ENST00000428274 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
PHF1-205ENST00000428274 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
PHF1-205ENST00000428274 KCNQ4P56696 695 aa17.9■□□□□ 0.46
PHF1-205ENST00000428274 SLC15A2Q16348 729 aa17.9■□□□□ 0.46
PHF1-205ENST00000428274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■■■□□ 16.5
PHF1-205ENST00000428274 IGSF1Q8N6C5 1336 aa17.9■□□□□ 0.46
PHF1-205ENST00000428274 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
PHF1-205ENST00000428274 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
PHF1-205ENST00000428274 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
PHF1-205ENST00000428274 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
PHF1-205ENST00000428274 PTGER2P43116 358 aa17.88■□□□□ 0.45
PHF1-205ENST00000428274 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
PHF1-205ENST00000428274 ITGB4P16144 1822 aa17.87■□□□□ 0.45
PHF1-205ENST00000428274 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
PHF1-205ENST00000428274 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
PHF1-205ENST00000428274 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
PHF1-205ENST00000428274 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
PHF1-205ENST00000428274 LY75O60449 1722 aa17.86■□□□□ 0.45
PHF1-205ENST00000428274 TOGARAM1Q9Y4F4 1720 aa17.86■□□□□ 0.45
PHF1-205ENST00000428274 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
PHF1-205ENST00000428274 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
PHF1-205ENST00000428274 IL13P35225 146 aa17.84■□□□□ 0.45
PHF1-205ENST00000428274 MTHFSP49914 203 aa17.84■□□□□ 0.45
PHF1-205ENST00000428274 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
PHF1-205ENST00000428274 PPP1R1BQ9UD71 204 aaPredicted RBP17.84■□□□□ 0.45
PHF1-205ENST00000428274 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
PHF1-205ENST00000428274 KDRP35968 1356 aa17.82■□□□□ 0.44
PHF1-205ENST00000428274 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
PHF1-205ENST00000428274 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
PHF1-205ENST00000428274 PHKG2P15735 406 aa17.81■□□□□ 0.44
PHF1-205ENST00000428274 IFNL2Q8IZJ0 200 aa17.81■□□□□ 0.44
PHF1-205ENST00000428274 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
PHF1-205ENST00000428274 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
PHF1-205ENST00000428274 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
PHF1-205ENST00000428274 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
PHF1-205ENST00000428274 PIGBQ92521 554 aa17.78■□□□□ 0.44
PHF1-205ENST00000428274 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
PHF1-205ENST00000428274 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
PHF1-205ENST00000428274 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
PHF1-205ENST00000428274 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
PHF1-205ENST00000428274 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
PHF1-205ENST00000428274 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
PHF1-205ENST00000428274 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
PHF1-205ENST00000428274 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
PHF1-205ENST00000428274 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
PHF1-205ENST00000428274 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
PHF1-205ENST00000428274 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
PHF1-205ENST00000428274 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
PHF1-205ENST00000428274 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
PHF1-205ENST00000428274 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
PHF1-205ENST00000428274 SYT17Q9BSW7 474 aa17.74■□□□□ 0.43
PHF1-205ENST00000428274 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
PHF1-205ENST00000428274 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
PHF1-205ENST00000428274 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
PHF1-205ENST00000428274 C5P01031 1676 aa17.73■□□□□ 0.43
PHF1-205ENST00000428274 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
PHF1-205ENST00000428274 HMOX1P09601 288 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 AMIGO3Q86WK7 504 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 ARXQ96QS3 562 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 TFCP2L1Q9NZI6 479 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
PHF1-205ENST00000428274 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
PHF1-205ENST00000428274 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
PHF1-205ENST00000428274 ATG3Q9NT62 314 aa17.7■□□□□ 0.42
PHF1-205ENST00000428274 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
PHF1-205ENST00000428274 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
PHF1-205ENST00000428274 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
PHF1-205ENST00000428274 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
PHF1-205ENST00000428274 SLC16A10Q8TF71 515 aa17.69■□□□□ 0.42
PHF1-205ENST00000428274 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
PHF1-205ENST00000428274 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
PHF1-205ENST00000428274 SIK1P57059 783 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms