RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
PMPCB-202ENST00000428154 BABAM1Q9NWV8 329 aa25.19■■□□□ 1.62
PMPCB-202ENST00000428154 RPAP2Q8IXW5 612 aaPredicted RBP25.18■■□□□ 1.62
PMPCB-202ENST00000428154 LNPKQ9C0E8 428 aa25.18■■□□□ 1.62
PMPCB-202ENST00000428154 KCNA6P17658 529 aa25.17■■□□□ 1.62
PMPCB-202ENST00000428154 ANKRD45Q5TZF3 282 aa25.17■■□□□ 1.62
PMPCB-202ENST00000428154 PLPPR3Q6T4P5 718 aa25.17■■□□□ 1.62
PMPCB-202ENST00000428154 NLRP6P59044 892 aa25.17■■□□□ 1.62
PMPCB-202ENST00000428154 MCM10Q7L590 875 aa25.17■■□□□ 1.62
PMPCB-202ENST00000428154 MARF1Q9Y4F3 1742 aaKnown RBP25.16■■□□□ 1.62
PMPCB-202ENST00000428154 ANKLE2Q86XL3 938 aa25.16■■□□□ 1.62
PMPCB-202ENST00000428154 LRRC37A3O60309 1634 aa25.16■■□□□ 1.62
PMPCB-202ENST00000428154 MTHFSDQ2M296 383 aaKnown RBP25.15■■□□□ 1.62
PMPCB-202ENST00000428154 EYA1Q99502 592 aa25.15■■□□□ 1.62
PMPCB-202ENST00000428154 RGS12O14924 1447 aa25.15■■□□□ 1.62
PMPCB-202ENST00000428154 RBM25P49756 843 aaKnown RBP25.15■■□□□ 1.62
PMPCB-202ENST00000428154 DCTPP1Q9H773 170 aa25.15■■□□□ 1.62
PMPCB-202ENST00000428154 SIRT2Q8IXJ6 389 aa25.14■■□□□ 1.61
PMPCB-202ENST00000428154 MFAP1P55081 439 aaKnown RBP25.13■■□□□ 1.61
PMPCB-202ENST00000428154 ANKRD44Q8N8A2 993 aa25.13■■□□□ 1.61
PMPCB-202ENST00000428154 TBC1D2Q9BYX2 928 aa25.13■■□□□ 1.61
PMPCB-202ENST00000428154 CACNA1FO60840 1977 aa25.13■■□□□ 1.61
PMPCB-202ENST00000428154 HOXC9P31274 260 aa25.12■■□□□ 1.61
PMPCB-202ENST00000428154 TSPYL4Q9UJ04 414 aa25.12■■□□□ 1.61
PMPCB-202ENST00000428154 C1orf115Q9H7X2 142 aa25.1■■□□□ 1.61
PMPCB-202ENST00000428154 SETD1BQ9UPS6 1966 aaKnown RBP25.1■■□□□ 1.61
PMPCB-202ENST00000428154 SOX12O15370 315 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 CCT4P50991 539 aaKnown RBP25.09■■□□□ 1.61
PMPCB-202ENST00000428154 GSE1Q14687 1217 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 ANTXR1Q9H6X2 564 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 GNAT3A8MTJ3 354 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 ABTB2Q8N961 1025 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 PHF8Q9UPP1 1060 aa25.09■■□□□ 1.61
PMPCB-202ENST00000428154 ATP10DQ9P241 1426 aa25.08■■□□□ 1.61
PMPCB-202ENST00000428154 NWD1Q149M9 1564 aa25.08■■□□□ 1.6
PMPCB-202ENST00000428154 SNX21Q969T3 373 aa25.07■■□□□ 1.6
PMPCB-202ENST00000428154 SLC4A2P04920 1241 aa25.06■■□□□ 1.6
PMPCB-202ENST00000428154 CHMP4AQ9BY43 222 aa25.06■■□□□ 1.6
PMPCB-202ENST00000428154 ADGRL3Q9HAR2 1447 aa25.06■■□□□ 1.6
PMPCB-202ENST00000428154 HMMRO75330 724 aa25.06■■□□□ 1.6
PMPCB-202ENST00000428154 STK31Q9BXU1 1019 aa25.06■■□□□ 1.6
PMPCB-202ENST00000428154 PHRF1Q9P1Y6 1649 aaKnown RBP25.05■■□□□ 1.6
PMPCB-202ENST00000428154 MAP3K5Q99683 1374 aa25.05■■□□□ 1.6
PMPCB-202ENST00000428154 CCDC30Q5VVM6 783 aa25.04■■□□□ 1.6
PMPCB-202ENST00000428154 CEP85Q6P2H3 762 aa25.04■■□□□ 1.6
PMPCB-202ENST00000428154 HSCBQ8IWL3 235 aa25.04■■□□□ 1.6
PMPCB-202ENST00000428154 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
PMPCB-202ENST00000428154 FRAT2O75474 233 aaPredicted RBP25.03■■□□□ 1.6
PMPCB-202ENST00000428154 KRT24Q2M2I5 525 aa25.03■■□□□ 1.6
PMPCB-202ENST00000428154 FOXO3O43524 673 aa25.03■■□□□ 1.6
PMPCB-202ENST00000428154 CDC45O75419 566 aa25.03■■□□□ 1.6
PMPCB-202ENST00000428154 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
PMPCB-202ENST00000428154 MSH6P52701 1360 aa25.02■■□□□ 1.6
PMPCB-202ENST00000428154 LTN1O94822 1766 aa25.02■■□□□ 1.6
PMPCB-202ENST00000428154 ADAMTSL3P82987 1691 aa25.02■■□□□ 1.6
PMPCB-202ENST00000428154 IP6K1Q92551 441 aa25.02■■□□□ 1.6
PMPCB-202ENST00000428154 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
PMPCB-202ENST00000428154 TAF7Q15545 349 aaPredicted RBP25■■□□□ 1.59
PMPCB-202ENST00000428154 PLEKHM2Q8IWE5 1019 aa25■■□□□ 1.59
PMPCB-202ENST00000428154 CHMP5Q9NZZ3 219 aa25■■□□□ 1.59
PMPCB-202ENST00000428154 FAM208AQ9UK61 1670 aaKnown RBP25■■□□□ 1.59
PMPCB-202ENST00000428154 NFAT5O94916 1531 aa25■■□□□ 1.59
PMPCB-202ENST00000428154 N4BP2Q86UW6 1770 aaPredicted RBP25■■□□□ 1.59
PMPCB-202ENST00000428154 SLKQ9H2G2 1235 aaPredicted RBP24.99■■□□□ 1.59
PMPCB-202ENST00000428154 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
PMPCB-202ENST00000428154 TBC1D9Q6ZT07 1266 aa24.98■■□□□ 1.59
PMPCB-202ENST00000428154 TTC22Q5TAA0 569 aa24.97■■□□□ 1.59
PMPCB-202ENST00000428154 GNAI3P08754 354 aa24.96■■□□□ 1.59
PMPCB-202ENST00000428154 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
PMPCB-202ENST00000428154 MEIS3Q99687 375 aa24.95■■□□□ 1.59
PMPCB-202ENST00000428154 MIS18AQ9NYP9 233 aa24.95■■□□□ 1.59
PMPCB-202ENST00000428154 HOXB7P09629 217 aa24.95■■□□□ 1.58
PMPCB-202ENST00000428154 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
PMPCB-202ENST00000428154 GNAI2P04899 355 aa24.94■■□□□ 1.58
PMPCB-202ENST00000428154 PSME1Q06323 249 aa24.94■■□□□ 1.58
PMPCB-202ENST00000428154 CIZ1Q9ULV3 898 aaPredicted RBP24.94■■□□□ 1.58
PMPCB-202ENST00000428154 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
PMPCB-202ENST00000428154 CASC1Q6TDU7 716 aa24.93■■□□□ 1.58
PMPCB-202ENST00000428154 IL17REQ8NFR9 667 aa24.93■■□□□ 1.58
PMPCB-202ENST00000428154 FLIIQ13045 1269 aa24.92■■□□□ 1.58
PMPCB-202ENST00000428154 MED1Q15648 1581 aaPredicted RBP24.92■■□□□ 1.58
PMPCB-202ENST00000428154 NUTM2GQ5VZR2 741 aa24.92■■□□□ 1.58
PMPCB-202ENST00000428154 OSBPL3Q9H4L5 887 aa24.92■■□□□ 1.58
PMPCB-202ENST00000428154 G2E3Q7L622 706 aa24.91■■□□□ 1.58
PMPCB-202ENST00000428154 C14orf37Q86TY3 774 aa24.91■■□□□ 1.58
PMPCB-202ENST00000428154 GSPT1P15170 499 aaKnown RBP24.9■■□□□ 1.58
PMPCB-202ENST00000428154 SLIT3O75094 1523 aa24.9■■□□□ 1.58
PMPCB-202ENST00000428154 LMO7Q8WWI1 1683 aa24.89■■□□□ 1.58
PMPCB-202ENST00000428154 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.57
PMPCB-202ENST00000428154 SLC4A10Q6U841 1118 aa24.89■■□□□ 1.57
PMPCB-202ENST00000428154 OVOS2A0A0G2JMS6 1433 aa24.89■■□□□ 1.57
PMPCB-202ENST00000428154 NCAPD2Q15021 1401 aa24.88■■□□□ 1.57
PMPCB-202ENST00000428154 AMOTQ4VCS5 1084 aa24.88■■□□□ 1.57
PMPCB-202ENST00000428154 FKBP5Q13451 457 aaPredicted RBP24.87■■□□□ 1.57
PMPCB-202ENST00000428154 KIF1AQ12756 1690 aa24.87■■□□□ 1.57
PMPCB-202ENST00000428154 LTV1Q96GA3 475 aaPredicted RBP24.86■■□□□ 1.57
PMPCB-202ENST00000428154 LMTK3Q96Q04 1460 aa24.86■■□□□ 1.57
PMPCB-202ENST00000428154 KIF2CQ99661 725 aa24.86■■□□□ 1.57
PMPCB-202ENST00000428154 KDM3BQ7LBC6 1761 aa24.85■■□□□ 1.57
PMPCB-202ENST00000428154 DDIT3P35638 169 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms