RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 PSME1Q06323 249 aa7.21□□□□□ -1.25
NUDCD1-202ENST00000427660 MAGEB6P1A0A0J9YX57 407 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 ESPNB1AK53 854 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 ADH1BP00325 375 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 MAPK1P28482 360 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 WEE1P30291 646 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 ERFEQ4G0M1 354 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 GTF3C2Q8WUA4 911 aaPredicted RBP7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 COL26A1Q96A83 441 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 CARD14Q9BXL6 1004 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 PCDH10Q9P2E7 1040 aa7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 CDV3Q9UKY7 258 aaKnown RBP7.21□□□□□ -1.26
NUDCD1-202ENST00000427660 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 PTCRAQ6ISU1 281 aaPredicted RBP7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 WNT2BQ93097 391 aa7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 SLC10A4Q96EP9 437 aa7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 HINFPQ9BQA5 517 aa7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 ECM1Q16610 540 aa7.2□□□□□ -1.26
NUDCD1-202ENST00000427660 CCDC24Q8N4L8 307 aa7.19□□□□□ -1.26
NUDCD1-202ENST00000427660 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 RGL4Q8IZJ4 473 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 ANO2Q9NQ90 1003 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 DNMT3AQ9Y6K1 912 aaPredicted RBP7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 COPS2P61201 443 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 NYAP1Q6ZVC0 841 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 C1QTNF2Q9BXJ5 285 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 WBP1LQ9NX94 342 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 SEPT3Q9UH03 358 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 PCDHB11Q9Y5F2 797 aa7.18□□□□□ -1.26
NUDCD1-202ENST00000427660 ZPR1O75312 459 aa7.17□□□□□ -1.26
NUDCD1-202ENST00000427660 AGERQ15109 404 aa7.17□□□□□ -1.26
NUDCD1-202ENST00000427660 TRMT44Q8IYL2 757 aaKnown RBP7.17□□□□□ -1.26
NUDCD1-202ENST00000427660 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
NUDCD1-202ENST00000427660 FKBP5Q13451 457 aaPredicted RBP7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 HELQQ8TDG4 1101 aa7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 BAP1Q92560 729 aa7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 HS3ST6Q96QI5 342 aa7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 FOXO3O43524 673 aa7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 NPR3P17342 541 aa7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 TSEN2Q8NCE0 465 aaKnown RBP7.16□□□□□ -1.26
NUDCD1-202ENST00000427660 IGFBP4P22692 258 aa7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 EAPPQ56P03 285 aaPredicted RBP7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 CDAN1Q8IWY9 1227 aa7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 FOXJ1Q92949 421 aa7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 SLC6A16Q9GZN6 736 aa7.15□□□□□ -1.26
NUDCD1-202ENST00000427660 RECKO95980 971 aa7.15□□□□□ -1.27
NUDCD1-202ENST00000427660 HMGB1P09429 215 aaKnown RBP7.15□□□□□ -1.27
NUDCD1-202ENST00000427660 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.27
NUDCD1-202ENST00000427660 MKNK1Q9BUB5 465 aa7.15□□□□□ -1.27
NUDCD1-202ENST00000427660 TLL1O43897 1013 aa7.14□□□□□ -1.27
NUDCD1-202ENST00000427660 FAM13AO94988 1023 aa7.14□□□□□ -1.27
NUDCD1-202ENST00000427660 RBCK1Q9BYM8 510 aa7.14□□□□□ -1.27
NUDCD1-202ENST00000427660 SREK1Q8WXA9 508 aaKnown RBP7.13□□□□□ -1.27
NUDCD1-202ENST00000427660 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
NUDCD1-202ENST00000427660 DRC1Q96MC2 740 aa7.13□□□□□ -1.27
NUDCD1-202ENST00000427660 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
NUDCD1-202ENST00000427660 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
NUDCD1-202ENST00000427660 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 WASLO00401 505 aaPredicted RBP7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 FGD1P98174 961 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 TAGLNQ01995 201 aaKnown RBP7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 MTMR3Q13615 1198 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 CITED4Q96RK1 184 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 CAPN12Q6ZSI9 719 aa7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.12□□□□□ -1.27
NUDCD1-202ENST00000427660 BACH1O14867 736 aa7.11□□□□□ -1.27
NUDCD1-202ENST00000427660 LGR5O75473 907 aa7.11□□□□□ -1.27
NUDCD1-202ENST00000427660 ITGAEP38570 1179 aa7.11□□□□□ -1.27
NUDCD1-202ENST00000427660 THSD4Q6ZMP0 1018 aa7.11□□□□□ -1.27
NUDCD1-202ENST00000427660 PURBQ96QR8 312 aaKnown RBP7.11□□□□□ -1.27
NUDCD1-202ENST00000427660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.271e-6■■■■■ 113.1
NUDCD1-202ENST00000427660 NDUFB5O43674 189 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 ANKRD13DQ6ZTN6 518 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 MTRQ99707 1265 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 MAP4K5Q9Y4K4 846 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 TMEM229AB2RXF0 380 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 IL21Q9HBE4 155 aa7.1□□□□□ -1.27
NUDCD1-202ENST00000427660 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 SH3BP2P78314 561 aa7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 NAA30Q147X3 362 aaPredicted RBP7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 TSNAXIP1Q2TAA8 658 aa7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 TMC7Q7Z402 723 aa7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 PUS7Q96PZ0 661 aaKnown RBP7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.27
NUDCD1-202ENST00000427660 TREHO43280 583 aa7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 FMR1Q06787 632 aaKnown RBP eCLIP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 SF3A1Q15459 793 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 FCF1Q9Y324 198 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 HSP90B1P14625 803 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-202ENST00000427660 SCG3Q8WXD2 468 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms