RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 PRKAR2BP31323 418 aa23.53■■□□□ 1.36
AC055811.2-201ENST00000427497 TMPOP42166 694 aaKnown RBP23.53■■□□□ 1.36
AC055811.2-201ENST00000427497 DEFB132Q7Z7B7 95 aa23.53■■□□□ 1.36
AC055811.2-201ENST00000427497 COL18A1P39060 1754 aa23.52■■□□□ 1.36
AC055811.2-201ENST00000427497 NEUROD2Q15784 382 aa23.52■■□□□ 1.36
AC055811.2-201ENST00000427497 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
AC055811.2-201ENST00000427497 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
AC055811.2-201ENST00000427497 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
AC055811.2-201ENST00000427497 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 E9PSI1 815 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 HMOX1P09601 288 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 AMPHP49418 695 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 WDR63Q8IWG1 891 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 KCNH5Q8NCM2 988 aa23.51■■□□□ 1.35
AC055811.2-201ENST00000427497 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
AC055811.2-201ENST00000427497 HOXC9P31274 260 aa23.49■■□□□ 1.35
AC055811.2-201ENST00000427497 CRB1P82279 1406 aa23.48■■□□□ 1.35
AC055811.2-201ENST00000427497 TRIM35Q9UPQ4 493 aa23.48■■□□□ 1.35
AC055811.2-201ENST00000427497 THRAP3Q9Y2W1 955 aaKnown RBP23.48■■□□□ 1.35
AC055811.2-201ENST00000427497 SRCAPQ6ZRS2 3230 aa23.46■■□□□ 1.35
AC055811.2-201ENST00000427497 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
AC055811.2-201ENST00000427497 NEFMP07197 916 aa23.46■■□□□ 1.35
AC055811.2-201ENST00000427497 ARHGEF25Q86VW2 580 aa23.46■■□□□ 1.35
AC055811.2-201ENST00000427497 PHACTR3Q96KR7 559 aa23.46■■□□□ 1.35
AC055811.2-201ENST00000427497 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
AC055811.2-201ENST00000427497 BAG6P46379 1132 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 RIPK4P57078 832 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 SULT6B1Q6IMI4 303 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 IP6K1Q92551 441 aa23.44■■□□□ 1.34
AC055811.2-201ENST00000427497 KDRP35968 1356 aa23.43■■□□□ 1.34
AC055811.2-201ENST00000427497 ERICH6BQ5W0A0 696 aa23.43■■□□□ 1.34
AC055811.2-201ENST00000427497 FAM196AQ6ZSG2 479 aa23.43■■□□□ 1.34
AC055811.2-201ENST00000427497 AEBP1Q8IUX7 1158 aa23.43■■□□□ 1.34
AC055811.2-201ENST00000427497 IL16Q14005 1332 aa23.41■■□□□ 1.34
AC055811.2-201ENST00000427497 DLG5Q8TDM6 1919 aa23.41■■□□□ 1.34
AC055811.2-201ENST00000427497 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
AC055811.2-201ENST00000427497 EYA1Q99502 592 aa23.41■■□□□ 1.34
AC055811.2-201ENST00000427497 WDR17Q8IZU2 1322 aa23.4■■□□□ 1.34
AC055811.2-201ENST00000427497 TOM1L2Q6ZVM7 507 aa23.4■■□□□ 1.34
AC055811.2-201ENST00000427497 DISP2A7MBM2 1401 aa23.39■■□□□ 1.34
AC055811.2-201ENST00000427497 ABCC6O95255 1503 aa23.39■■□□□ 1.34
AC055811.2-201ENST00000427497 WNK3Q9BYP7 1800 aa23.39■■□□□ 1.34
AC055811.2-201ENST00000427497 RRP1P56182 461 aaKnown RBP23.39■■□□□ 1.34
AC055811.2-201ENST00000427497 TRIM37O94972 964 aa23.38■■□□□ 1.33
AC055811.2-201ENST00000427497 EN1Q05925 392 aaPredicted RBP23.38■■□□□ 1.33
AC055811.2-201ENST00000427497 LRRC37A3O60309 1634 aa23.37■■□□□ 1.33
AC055811.2-201ENST00000427497 MYH16Q9H6N6 1097 aa23.37■■□□□ 1.33
AC055811.2-201ENST00000427497 CSB-PGBD3P0DP91 1061 aa23.34■■□□□ 1.33
AC055811.2-201ENST00000427497 LMOD3Q0VAK6 560 aa23.33■■□□□ 1.33
AC055811.2-201ENST00000427497 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
AC055811.2-201ENST00000427497 DDB1Q16531 1140 aa23.32■■□□□ 1.32
AC055811.2-201ENST00000427497 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
AC055811.2-201ENST00000427497 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
AC055811.2-201ENST00000427497 APBA3O96018 575 aa23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 CAMKK2Q96RR4 588 aa23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 RGPD2P0DJD1 1756 aa23.3■■□□□ 1.32
AC055811.2-201ENST00000427497 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
AC055811.2-201ENST00000427497 ERBB3P21860 1342 aa23.29■■□□□ 1.32
AC055811.2-201ENST00000427497 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
AC055811.2-201ENST00000427497 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
AC055811.2-201ENST00000427497 TSR2Q969E8 191 aaKnown RBP23.26■■□□□ 1.31
AC055811.2-201ENST00000427497 RREB1Q92766 1687 aa23.26■■□□□ 1.31
AC055811.2-201ENST00000427497 PSDA5PKW4 1024 aaPredicted RBP23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 CT47B1P0C2W7 299 aaPredicted RBP23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 ZNF853P0CG23 659 aa23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 THUMPD2Q9BTF0 503 aaKnown RBP23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 PPP4R2Q9NY27 417 aa23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 ANKRD24Q8TF21 1146 aa23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
AC055811.2-201ENST00000427497 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
AC055811.2-201ENST00000427497 PLIN1O60240 522 aa23.23■■□□□ 1.31
AC055811.2-201ENST00000427497 MARCH10Q8NA82 808 aaPredicted RBP23.23■■□□□ 1.31
AC055811.2-201ENST00000427497 GNAI1P63096 354 aa23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.22■■□□□ 1.31
AC055811.2-201ENST00000427497 BCL9O00512 1426 aa23.21■■□□□ 1.31
AC055811.2-201ENST00000427497 LRP5O75197 1615 aa23.21■■□□□ 1.31
AC055811.2-201ENST00000427497 EXOC5O00471 708 aa23.21■■□□□ 1.31
AC055811.2-201ENST00000427497 BCAR3O75815 825 aa23.21■■□□□ 1.31
AC055811.2-201ENST00000427497 CFAP44Q96MT7 982 aa23.21■■□□□ 1.31
AC055811.2-201ENST00000427497 DCTN1Q14203 1278 aa23.2■■□□□ 1.3
AC055811.2-201ENST00000427497 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
AC055811.2-201ENST00000427497 TNS2Q63HR2 1409 aa23.2■■□□□ 1.3
AC055811.2-201ENST00000427497 RGPD3A6NKT7 1758 aaPredicted RBP23.19■■□□□ 1.3
AC055811.2-201ENST00000427497 RGPD4Q7Z3J3 1758 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms