RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 SF3B2Q13435 895 aaKnown RBP30.49■■■□□ 2.47
SDHAP1-204ENST00000427415 CFAP53Q96M91 514 aa30.49■■■□□ 2.47
SDHAP1-204ENST00000427415 TNS1Q9HBL0 1735 aaKnown RBP30.49■■■□□ 2.47
SDHAP1-204ENST00000427415 COL3A1P02461 1466 aaPredicted RBP30.49■■■□□ 2.47
SDHAP1-204ENST00000427415 ZCRB1Q8TBF4 217 aaKnown RBP30.48■■■□□ 2.47
SDHAP1-204ENST00000427415 DIAPH1O60610 1272 aaKnown RBP30.47■■■□□ 2.47
SDHAP1-204ENST00000427415 PLEKHG2Q9H7P9 1386 aa30.46■■■□□ 2.47
SDHAP1-204ENST00000427415 RALBP1Q15311 655 aa30.46■■■□□ 2.47
SDHAP1-204ENST00000427415 DDX54Q8TDD1 881 aaKnown RBP30.43■■■□□ 2.46
SDHAP1-204ENST00000427415 PCDH11XQ9BZA7 1347 aa30.43■■■□□ 2.46
SDHAP1-204ENST00000427415 PCDH11YQ9BZA8 1340 aa30.43■■■□□ 2.46
SDHAP1-204ENST00000427415 TRIM37O94972 964 aa30.42■■■□□ 2.46
SDHAP1-204ENST00000427415 KDRP35968 1356 aa30.41■■■□□ 2.46
SDHAP1-204ENST00000427415 NHSQ6T4R5 1651 aa30.4■■■□□ 2.46
SDHAP1-204ENST00000427415 SULT6B1Q6IMI4 303 aa30.4■■■□□ 2.46
SDHAP1-204ENST00000427415 SPG7Q9UQ90 795 aa30.4■■■□□ 2.46
SDHAP1-204ENST00000427415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.39■■■□□ 2.467e-6■■□□□ 12.8
SDHAP1-204ENST00000427415 DOT1LQ8TEK3 1739 aa30.38■■■□□ 2.45
SDHAP1-204ENST00000427415 BAG6P46379 1132 aa30.37■■■□□ 2.45
SDHAP1-204ENST00000427415 AEBP1Q8IUX7 1158 aa30.37■■■□□ 2.45
SDHAP1-204ENST00000427415 U2SURPO15042 1029 aaKnown RBP30.35■■■□□ 2.45
SDHAP1-204ENST00000427415 NUDCQ9Y266 331 aa30.35■■■□□ 2.45
SDHAP1-204ENST00000427415 MYBBP1AQ9BQG0 1328 aaKnown RBP30.35■■■□□ 2.45
SDHAP1-204ENST00000427415 BCL11BQ9C0K0 894 aaPredicted RBP30.33■■■□□ 2.45
SDHAP1-204ENST00000427415 HMOX1P09601 288 aa30.32■■■□□ 2.44
SDHAP1-204ENST00000427415 PLEKHO1Q53GL0 409 aaPredicted RBP30.32■■■□□ 2.44
SDHAP1-204ENST00000427415 RGPD3A6NKT7 1758 aaPredicted RBP30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 RGPD4Q7Z3J3 1758 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 CYP27B1O15528 508 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 APBA3O96018 575 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 AMOTQ4VCS5 1084 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 DEFB132Q7Z7B7 95 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 PRKRIP1Q9H875 184 aaPredicted RBP30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 BTAF1O14981 1849 aa30.31■■■□□ 2.44
SDHAP1-204ENST00000427415 ACSBG1Q96GR2 724 aa30.3■■■□□ 2.44
SDHAP1-204ENST00000427415 IFNL2Q8IZJ0 200 aa30.27■■■□□ 2.44
SDHAP1-204ENST00000427415 TOGARAM1Q9Y4F4 1720 aa30.26■■■□□ 2.43
SDHAP1-204ENST00000427415 ITGB4P16144 1822 aa30.25■■■□□ 2.43
SDHAP1-204ENST00000427415 KCNQ2O43526 872 aa30.25■■■□□ 2.43
SDHAP1-204ENST00000427415 PHKG2P15735 406 aa30.25■■■□□ 2.43
SDHAP1-204ENST00000427415 ZNF530Q6P9A1 599 aaPredicted RBP30.25■■■□□ 2.43
SDHAP1-204ENST00000427415 U2AF1L5P0DN76 240 aaPredicted RBP30.24■■■□□ 2.43
SDHAP1-204ENST00000427415 U2AF1Q01081 240 aaKnown RBP eCLIP30.24■■■□□ 2.43
SDHAP1-204ENST00000427415 EN1Q05925 392 aaPredicted RBP30.24■■■□□ 2.43
SDHAP1-204ENST00000427415 NKX1-1Q15270 411 aaPredicted RBP30.23■■■□□ 2.43
SDHAP1-204ENST00000427415 PTF1AQ7RTS3 328 aa30.23■■■□□ 2.43
SDHAP1-204ENST00000427415 C1orf141Q5JVX7 400 aa30.22■■■□□ 2.43
SDHAP1-204ENST00000427415 SYTL4Q96C24 671 aaPredicted RBP30.22■■■□□ 2.43
SDHAP1-204ENST00000427415 RREB1Q92766 1687 aa30.22■■■□□ 2.43
SDHAP1-204ENST00000427415 HSP90AB1P08238 724 aaKnown RBP30.21■■■□□ 2.43
SDHAP1-204ENST00000427415 PLSCR1O15162 318 aa30.2■■■□□ 2.43
SDHAP1-204ENST00000427415 PRIM1P49642 420 aaKnown RBP30.2■■■□□ 2.43
SDHAP1-204ENST00000427415 VIRMAQ69YN4 1812 aaKnown RBP30.19■■■□□ 2.42
SDHAP1-204ENST00000427415 CAMKK2Q96RR4 588 aa30.19■■■□□ 2.42
SDHAP1-204ENST00000427415 EZH2Q15910 746 aaKnown RBP30.18■■■□□ 2.42
SDHAP1-204ENST00000427415 RSPH6AQ9H0K4 717 aa30.18■■■□□ 2.42
SDHAP1-204ENST00000427415 ANP32CO43423 234 aa30.17■■■□□ 2.42
SDHAP1-204ENST00000427415 FCHSD2O94868 740 aa30.17■■■□□ 2.42
SDHAP1-204ENST00000427415 PRKAR2BP31323 418 aa30.17■■■□□ 2.42
SDHAP1-204ENST00000427415 NUP188Q5SRE5 1749 aa30.16■■■□□ 2.42
SDHAP1-204ENST00000427415 SCN11AQ9UI33 1791 aa30.16■■■□□ 2.42
SDHAP1-204ENST00000427415 DCAF5Q96JK2 942 aa30.16■■■□□ 2.42
SDHAP1-204ENST00000427415 AKAP4Q5JQC9 854 aa30.15■■■□□ 2.42
SDHAP1-204ENST00000427415 MTHFSDQ2M296 383 aaKnown RBP30.13■■■□□ 2.41
SDHAP1-204ENST00000427415 GAS2L2Q8NHY3 880 aa30.13■■■□□ 2.41
SDHAP1-204ENST00000427415 KDM6AO15550 1401 aaPredicted RBP30.12■■■□□ 2.41
SDHAP1-204ENST00000427415 MPRIPQ6WCQ1 1025 aa30.11■■■□□ 2.41
SDHAP1-204ENST00000427415 LY75O60449 1722 aa30.1■■■□□ 2.41
SDHAP1-204ENST00000427415 NEFMP07197 916 aa30.1■■■□□ 2.41
SDHAP1-204ENST00000427415 PNNQ9H307 717 aaKnown RBP30.1■■■□□ 2.41
SDHAP1-204ENST00000427415 TMOD3Q9NYL9 352 aa30.1■■■□□ 2.41
SDHAP1-204ENST00000427415 ERVV-2B6SEH9 535 aa30.09■■■□□ 2.41
SDHAP1-204ENST00000427415 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.41
SDHAP1-204ENST00000427415 MAP3K5Q99683 1374 aa30.07■■■□□ 2.4
SDHAP1-204ENST00000427415 WDR43Q15061 677 aaKnown RBP eCLIP30.07■■■□□ 2.4
SDHAP1-204ENST00000427415 TXNRD1Q16881 649 aa30.06■■■□□ 2.4
SDHAP1-204ENST00000427415 PHACTR3Q96KR7 559 aa30.06■■■□□ 2.4
SDHAP1-204ENST00000427415 PIGBQ92521 554 aa30.05■■■□□ 2.4
SDHAP1-204ENST00000427415 CABP4P57796 275 aa30.03■■■□□ 2.4
SDHAP1-204ENST00000427415 SMARCC1Q92922 1105 aaPredicted RBP30.03■■■□□ 2.4
SDHAP1-204ENST00000427415 MRC1P22897 1456 aa30.03■■■□□ 2.4
SDHAP1-204ENST00000427415 DLG5Q8TDM6 1919 aa30.02■■■□□ 2.4
SDHAP1-204ENST00000427415 MAPK8IP3Q9UPT6 1336 aa30.02■■■□□ 2.4
SDHAP1-204ENST00000427415 GNAT3A8MTJ3 354 aa30.02■■■□□ 2.4
SDHAP1-204ENST00000427415 PALLDQ8WX93 1383 aa30.02■■■□□ 2.4
SDHAP1-204ENST00000427415 SLC27A3Q5K4L6 730 aa30.01■■■□□ 2.39
SDHAP1-204ENST00000427415 PROM2Q8N271 834 aa30.01■■■□□ 2.39
SDHAP1-204ENST00000427415 RNMTO43148 476 aaKnown RBP30■■■□□ 2.39
SDHAP1-204ENST00000427415 NBPF14Q5TI25 921 aa30■■■□□ 2.39
SDHAP1-204ENST00000427415 PLEKHF1Q96S99 279 aa30■■■□□ 2.39
SDHAP1-204ENST00000427415 PAPPAQ13219 1627 aa29.97■■■□□ 2.39
SDHAP1-204ENST00000427415 LGR6Q9HBX8 967 aa29.97■■■□□ 2.39
SDHAP1-204ENST00000427415 SLC52A2Q9HAB3 445 aa29.96■■■□□ 2.39
SDHAP1-204ENST00000427415 CCNL1Q9UK58 526 aaPredicted RBP29.96■■■□□ 2.39
SDHAP1-204ENST00000427415 TAF1LQ8IZX4 1826 aa29.95■■■□□ 2.39
SDHAP1-204ENST00000427415 NFATC2IPQ8NCF5 419 aa29.95■■■□□ 2.39
SDHAP1-204ENST00000427415 RTF1Q92541 710 aaKnown RBP29.95■■■□□ 2.39
SDHAP1-204ENST00000427415 SIPA1L3O60292 1781 aaPredicted RBP29.95■■■□□ 2.38
SDHAP1-204ENST00000427415 C5P01031 1676 aa29.95■■■□□ 2.38
SDHAP1-204ENST00000427415 ASAP1Q9ULH1 1129 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms