RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
LIMS2-211ENST00000426981 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
LIMS2-211ENST00000426981 BCL11AQ9H165 835 aa23.39■■□□□ 1.33
LIMS2-211ENST00000426981 PANK3Q9H999 370 aa23.39■■□□□ 1.33
LIMS2-211ENST00000426981 EMILIN1Q9Y6C2 1016 aa23.39■■□□□ 1.33
LIMS2-211ENST00000426981 FAM208AQ9UK61 1670 aaKnown RBP23.38■■□□□ 1.33
LIMS2-211ENST00000426981 IRX6P78412 446 aaPredicted RBP23.38■■□□□ 1.33
LIMS2-211ENST00000426981 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
LIMS2-211ENST00000426981 KCNQ2O43526 872 aa23.37■■□□□ 1.33
LIMS2-211ENST00000426981 R3HDM1Q15032 1099 aaKnown RBP23.37■■□□□ 1.33
LIMS2-211ENST00000426981 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
LIMS2-211ENST00000426981 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
LIMS2-211ENST00000426981 RREB1Q92766 1687 aa23.37■■□□□ 1.33
LIMS2-211ENST00000426981 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
LIMS2-211ENST00000426981 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
LIMS2-211ENST00000426981 BCL11BQ9C0K0 894 aaPredicted RBP23.35■■□□□ 1.33
LIMS2-211ENST00000426981 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
LIMS2-211ENST00000426981 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
LIMS2-211ENST00000426981 BCL9O00512 1426 aa23.34■■□□□ 1.33
LIMS2-211ENST00000426981 PPM1GO15355 546 aaPredicted RBP23.33■■□□□ 1.33
LIMS2-211ENST00000426981 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.33
LIMS2-211ENST00000426981 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
LIMS2-211ENST00000426981 DDX54Q8TDD1 881 aaKnown RBP23.33■■□□□ 1.32
LIMS2-211ENST00000426981 MEGF6O75095 1541 aa23.32■■□□□ 1.32
LIMS2-211ENST00000426981 PNISRQ8TF01 805 aaKnown RBP23.32■■□□□ 1.32
LIMS2-211ENST00000426981 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
LIMS2-211ENST00000426981 FLT4P35916 1363 aa23.31■■□□□ 1.32
LIMS2-211ENST00000426981 PROM2Q8N271 834 aa23.31■■□□□ 1.32
LIMS2-211ENST00000426981 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
LIMS2-211ENST00000426981 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
LIMS2-211ENST00000426981 B4GALNT3Q6L9W6 998 aa23.3■■□□□ 1.32
LIMS2-211ENST00000426981 SHANK3Q9BYB0 1731 aa23.29■■□□□ 1.32
LIMS2-211ENST00000426981 PLSCR1O15162 318 aa23.29■■□□□ 1.32
LIMS2-211ENST00000426981 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
LIMS2-211ENST00000426981 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
LIMS2-211ENST00000426981 CCDC136Q96JN2 1154 aa23.28■■□□□ 1.32
LIMS2-211ENST00000426981 NHSQ6T4R5 1651 aa23.28■■□□□ 1.32
LIMS2-211ENST00000426981 ANP32AP39687 249 aaKnown RBP23.27■■□□□ 1.32
LIMS2-211ENST00000426981 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
LIMS2-211ENST00000426981 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
LIMS2-211ENST00000426981 ZCRB1Q8TBF4 217 aaKnown RBP23.25■■□□□ 1.31
LIMS2-211ENST00000426981 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-211ENST00000426981 RGPD3A6NKT7 1758 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-211ENST00000426981 RGPD4Q7Z3J3 1758 aa23.24■■□□□ 1.31
LIMS2-211ENST00000426981 BTAF1O14981 1849 aa23.23■■□□□ 1.31
LIMS2-211ENST00000426981 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
LIMS2-211ENST00000426981 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
LIMS2-211ENST00000426981 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
LIMS2-211ENST00000426981 TATP17735 454 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-211ENST00000426981 EYA1Q99502 592 aa23.2■■□□□ 1.3
LIMS2-211ENST00000426981 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
LIMS2-211ENST00000426981 PRIM1P49642 420 aaKnown RBP23.19■■□□□ 1.3
LIMS2-211ENST00000426981 KNSTRNQ9Y448 316 aa23.19■■□□□ 1.3
LIMS2-211ENST00000426981 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
LIMS2-211ENST00000426981 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
LIMS2-211ENST00000426981 LRP5O75197 1615 aa23.18■■□□□ 1.3
LIMS2-211ENST00000426981 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
LIMS2-211ENST00000426981 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-211ENST00000426981 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-211ENST00000426981 PDGFDQ9GZP0 370 aaPredicted RBP23.17■■□□□ 1.3
LIMS2-211ENST00000426981 IPO9Q96P70 1041 aaKnown RBP23.16■■□□□ 1.3
LIMS2-211ENST00000426981 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
LIMS2-211ENST00000426981 NSD2O96028 1365 aa23.16■■□□□ 1.3
LIMS2-211ENST00000426981 MS4A1P11836 297 aa23.16■■□□□ 1.3
LIMS2-211ENST00000426981 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-211ENST00000426981 CYP27B1O15528 508 aa23.14■■□□□ 1.29
LIMS2-211ENST00000426981 KCNQ4P56696 695 aa23.14■■□□□ 1.29
LIMS2-211ENST00000426981 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
LIMS2-211ENST00000426981 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-211ENST00000426981 RRP1P56182 461 aaKnown RBP23.12■■□□□ 1.29
LIMS2-211ENST00000426981 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
LIMS2-211ENST00000426981 CC2D1BQ5T0F9 858 aaKnown RBP23.1■■□□□ 1.29
LIMS2-211ENST00000426981 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
LIMS2-211ENST00000426981 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
LIMS2-211ENST00000426981 TOGARAM1Q9Y4F4 1720 aa23.09■■□□□ 1.29
LIMS2-211ENST00000426981 SLC15A2Q16348 729 aa23.08■■□□□ 1.29
LIMS2-211ENST00000426981 CASZ1Q86V15 1759 aa23.08■■□□□ 1.29
LIMS2-211ENST00000426981 PAPPAQ13219 1627 aa23.08■■□□□ 1.28
LIMS2-211ENST00000426981 ZNF827Q17R98 1081 aa23.08■■□□□ 1.28
LIMS2-211ENST00000426981 STK32BQ9NY57 414 aa23.08■■□□□ 1.28
LIMS2-211ENST00000426981 ZBTB47Q9UFB7 747 aaPredicted RBP23.08■■□□□ 1.28
LIMS2-211ENST00000426981 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
LIMS2-211ENST00000426981 AEBP1Q8IUX7 1158 aa23.06■■□□□ 1.28
LIMS2-211ENST00000426981 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
LIMS2-211ENST00000426981 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
LIMS2-211ENST00000426981 ITGB4P16144 1822 aa23.04■■□□□ 1.28
LIMS2-211ENST00000426981 LY75O60449 1722 aa23.04■■□□□ 1.28
LIMS2-211ENST00000426981 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
LIMS2-211ENST00000426981 SPG7Q9UQ90 795 aa23.04■■□□□ 1.28
LIMS2-211ENST00000426981 MTHFSP49914 203 aa23.03■■□□□ 1.28
LIMS2-211ENST00000426981 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-211ENST00000426981 IL13P35225 146 aa23.02■■□□□ 1.28
LIMS2-211ENST00000426981 SPON1Q9HCB6 807 aa23.01■■□□□ 1.27
LIMS2-211ENST00000426981 ATF5Q9Y2D1 282 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-211ENST00000426981 PHKG2P15735 406 aa23■■□□□ 1.27
LIMS2-211ENST00000426981 DEKP35659 375 aaKnown RBP23■■□□□ 1.27
LIMS2-211ENST00000426981 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
LIMS2-211ENST00000426981 AKT1S1Q96B36 256 aa23■■□□□ 1.27
LIMS2-211ENST00000426981 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
LIMS2-211ENST00000426981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms