RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 PDGFDQ9GZP0 370 aaPredicted RBP34.59■■■■□ 3.13
PTPMT1-203ENST00000426530 ANKRD26Q9UPS8 1709 aa34.57■■■■□ 3.12
PTPMT1-203ENST00000426530 ZCRB1Q8TBF4 217 aaKnown RBP34.55■■■■□ 3.12
PTPMT1-203ENST00000426530 CGNL1Q0VF96 1302 aa34.55■■■■□ 3.12
PTPMT1-203ENST00000426530 KIF24Q5T7B8 1368 aa34.54■■■■□ 3.12
PTPMT1-203ENST00000426530 MAP2P11137 1827 aaKnown RBP34.54■■■■□ 3.12
PTPMT1-203ENST00000426530 PPM1GO15355 546 aaPredicted RBP34.54■■■■□ 3.12
PTPMT1-203ENST00000426530 STK32BQ9NY57 414 aa34.54■■■■□ 3.12
PTPMT1-203ENST00000426530 PAPPAQ13219 1627 aa34.54■■■■□ 3.12
PTPMT1-203ENST00000426530 SPON1Q9HCB6 807 aa34.53■■■■□ 3.12
PTPMT1-203ENST00000426530 SYTL4Q96C24 671 aaPredicted RBP34.52■■■■□ 3.12
PTPMT1-203ENST00000426530 RAPGEF4Q8WZA2 1011 aa34.51■■■■□ 3.12
PTPMT1-203ENST00000426530 SLC15A2Q16348 729 aa34.5■■■■□ 3.11
PTPMT1-203ENST00000426530 PRIM1P49642 420 aaKnown RBP34.49■■■■□ 3.11
PTPMT1-203ENST00000426530 ZBTB7AO95365 584 aa34.47■■■■□ 3.11
PTPMT1-203ENST00000426530 TATP17735 454 aaPredicted RBP34.47■■■■□ 3.11
PTPMT1-203ENST00000426530 NSD2O96028 1365 aa34.47■■■■□ 3.11
PTPMT1-203ENST00000426530 TNNT2P45379 298 aaPredicted RBP34.46■■■■□ 3.11
PTPMT1-203ENST00000426530 LRRC4BQ9NT99 713 aa34.46■■■■□ 3.11
PTPMT1-203ENST00000426530 PPP1R1BQ9UD71 204 aaPredicted RBP34.46■■■■□ 3.11
PTPMT1-203ENST00000426530 PANK3Q9H999 370 aa34.45■■■■□ 3.11
PTPMT1-203ENST00000426530 ZNF827Q17R98 1081 aa34.42■■■■□ 3.1
PTPMT1-203ENST00000426530 POLKQ9UBT6 870 aa34.42■■■■□ 3.1
PTPMT1-203ENST00000426530 KCNQ4P56696 695 aa34.41■■■■□ 3.1
PTPMT1-203ENST00000426530 LY75O60449 1722 aa34.41■■■■□ 3.1
PTPMT1-203ENST00000426530 PKD1L3Q7Z443 1732 aa34.41■■■■□ 3.1
PTPMT1-203ENST00000426530 WASHC2AQ641Q2 1341 aa34.4■■■■□ 3.1
PTPMT1-203ENST00000426530 ATF5Q9Y2D1 282 aaPredicted RBP34.4■■■■□ 3.1
PTPMT1-203ENST00000426530 NCAPD2Q15021 1401 aa34.38■■■■□ 3.09
PTPMT1-203ENST00000426530 PCDH11XQ9BZA7 1347 aa34.38■■■■□ 3.09
PTPMT1-203ENST00000426530 PCDH11YQ9BZA8 1340 aa34.38■■■■□ 3.09
PTPMT1-203ENST00000426530 TOGARAM1Q9Y4F4 1720 aa34.37■■■■□ 3.09
PTPMT1-203ENST00000426530 TUBGCP6Q96RT7 1819 aa34.35■■■■□ 3.09
PTPMT1-203ENST00000426530 CYP27B1O15528 508 aa34.34■■■■□ 3.09
PTPMT1-203ENST00000426530 PTGER2P43116 358 aa34.34■■■■□ 3.09
PTPMT1-203ENST00000426530 EYA1Q99502 592 aa34.34■■■■□ 3.09
PTPMT1-203ENST00000426530 SLC27A3Q5K4L6 730 aa34.33■■■■□ 3.09
PTPMT1-203ENST00000426530 AKT1S1Q96B36 256 aa34.31■■■■□ 3.08
PTPMT1-203ENST00000426530 ITGB4P16144 1822 aa34.3■■■■□ 3.08
PTPMT1-203ENST00000426530 EIF4A2Q14240 407 aaKnown RBP34.3■■■■□ 3.08
PTPMT1-203ENST00000426530 QSER1Q2KHR3 1735 aa34.3■■■■□ 3.08
PTPMT1-203ENST00000426530 MTFR1LQ9H019 292 aa34.29■■■■□ 3.08
PTPMT1-203ENST00000426530 CCNL1Q9UK58 526 aaPredicted RBP34.28■■■■□ 3.08
PTPMT1-203ENST00000426530 KIF7Q2M1P5 1343 aa34.27■■■■□ 3.08
PTPMT1-203ENST00000426530 MPRIPQ6WCQ1 1025 aa34.25■■■■□ 3.07
PTPMT1-203ENST00000426530 MORC1Q86VD1 984 aa34.23■■■■□ 3.07
PTPMT1-203ENST00000426530 SPG7Q9UQ90 795 aa34.23■■■■□ 3.07
PTPMT1-203ENST00000426530 PNPLA7Q6ZV29 1317 aa34.23■■■■□ 3.07
PTPMT1-203ENST00000426530 SGIP1Q9BQI5 828 aa34.22■■■■□ 3.07
PTPMT1-203ENST00000426530 C5P01031 1676 aa34.22■■■■□ 3.07
PTPMT1-203ENST00000426530 TFCP2L1Q9NZI6 479 aa34.21■■■■□ 3.07
PTPMT1-203ENST00000426530 KNSTRNQ9Y448 316 aa34.21■■■■□ 3.07
PTPMT1-203ENST00000426530 PALLDQ8WX93 1383 aa34.2■■■■□ 3.07
PTPMT1-203ENST00000426530 IGSF1Q8N6C5 1336 aa34.18■■■■□ 3.06
PTPMT1-203ENST00000426530 TAF1LQ8IZX4 1826 aa34.18■■■■□ 3.06
PTPMT1-203ENST00000426530 FHDC1Q9C0D6 1143 aaPredicted RBP34.17■■■■□ 3.06
PTPMT1-203ENST00000426530 NKX1-1Q15270 411 aaPredicted RBP34.15■■■■□ 3.06
PTPMT1-203ENST00000426530 PIGBQ92521 554 aa34.14■■■■□ 3.06
PTPMT1-203ENST00000426530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.14■■■■□ 3.06
PTPMT1-203ENST00000426530 PHKG2P15735 406 aa34.13■■■■□ 3.05
PTPMT1-203ENST00000426530 AMER1Q5JTC6 1135 aaPredicted RBP34.13■■■■□ 3.05
PTPMT1-203ENST00000426530 ARXQ96QS3 562 aa34.12■■■■□ 3.05
PTPMT1-203ENST00000426530 COL24A1Q17RW2 1714 aa34.12■■■■□ 3.05
PTPMT1-203ENST00000426530 IFNL2Q8IZJ0 200 aa34.11■■■■□ 3.05
PTPMT1-203ENST00000426530 SYT17Q9BSW7 474 aa34.1■■■■□ 3.05
PTPMT1-203ENST00000426530 AEBP1Q8IUX7 1158 aa34.09■■■■□ 3.05
PTPMT1-203ENST00000426530 MSH5O43196 834 aa34.08■■■■□ 3.05
PTPMT1-203ENST00000426530 SLC16A10Q8TF71 515 aa34.08■■■■□ 3.05
PTPMT1-203ENST00000426530 C4BP0C0L5 1744 aa34.07■■■■□ 3.05
PTPMT1-203ENST00000426530 SMARCC1Q92922 1105 aaPredicted RBP34.07■■■■□ 3.04
PTPMT1-203ENST00000426530 TMOD3Q9NYL9 352 aa34.07■■■■□ 3.04
PTPMT1-203ENST00000426530 DCAF8L1A6NGE4 600 aa34.06■■■■□ 3.04
PTPMT1-203ENST00000426530 COL23A1Q86Y22 540 aaPredicted RBP34.06■■■■□ 3.04
PTPMT1-203ENST00000426530 KLHL34Q8N239 644 aa34.03■■■■□ 3.04
PTPMT1-203ENST00000426530 ASAP1Q9ULH1 1129 aa34.03■■■■□ 3.04
PTPMT1-203ENST00000426530 PLEKHG2Q9H7P9 1386 aa34.02■■■■□ 3.04
PTPMT1-203ENST00000426530 POLD1P28340 1107 aa34.02■■■■□ 3.04
PTPMT1-203ENST00000426530 CC2D1BQ5T0F9 858 aaKnown RBP34.02■■■■□ 3.04
PTPMT1-203ENST00000426530 PER1O15534 1290 aaPredicted RBP34.01■■■■□ 3.03
PTPMT1-203ENST00000426530 IL13P35225 146 aa34■■■■□ 3.03
PTPMT1-203ENST00000426530 CNGB1Q14028 1251 aaPredicted RBP34■■■■□ 3.03
PTPMT1-203ENST00000426530 PLEKHO1Q53GL0 409 aaPredicted RBP34■■■■□ 3.03
PTPMT1-203ENST00000426530 MSL1Q68DK7 614 aa34■■■■□ 3.03
PTPMT1-203ENST00000426530 SULT6B1Q6IMI4 303 aa34■■■■□ 3.03
PTPMT1-203ENST00000426530 ZNF530Q6P9A1 599 aaPredicted RBP34■■■■□ 3.03
PTPMT1-203ENST00000426530 UBR3Q6ZT12 1888 aa33.99■■■■□ 3.03
PTPMT1-203ENST00000426530 YY1P25490 414 aa33.99■■■■□ 3.03
PTPMT1-203ENST00000426530 KDM6AO15550 1401 aaPredicted RBP33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 LOC102724428A0A0B4J2F2 783 aa33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 SIK1P57059 783 aa33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 SMIM5Q71RC9 77 aa33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 AMIGO3Q86WK7 504 aa33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 MAP3K5Q99683 1374 aa33.98■■■■□ 3.03
PTPMT1-203ENST00000426530 MTHFSP49914 203 aa33.97■■■■□ 3.03
PTPMT1-203ENST00000426530 AK7Q96M32 723 aa33.97■■■■□ 3.03
PTPMT1-203ENST00000426530 LINC00116Q8NCU8 138 aa33.96■■■■□ 3.03
PTPMT1-203ENST00000426530 ATG3Q9NT62 314 aa33.96■■■■□ 3.03
PTPMT1-203ENST00000426530 PHF14O94880 888 aa33.94■■■■□ 3.02
PTPMT1-203ENST00000426530 ITPK1Q13572 414 aa33.94■■■■□ 3.02
PTPMT1-203ENST00000426530 AMOTQ4VCS5 1084 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms