RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 COL18A1P39060 1754 aa22.39■■□□□ 1.18
FN1-208ENST00000426059 HAP1P54257 671 aaPredicted RBP22.39■■□□□ 1.18
FN1-208ENST00000426059 PANK1Q8TE04 598 aa22.39■■□□□ 1.18
FN1-208ENST00000426059 SMC4Q9NTJ3 1288 aa22.39■■□□□ 1.18
FN1-208ENST00000426059 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
FN1-208ENST00000426059 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
FN1-208ENST00000426059 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
FN1-208ENST00000426059 NLRP2Q9NX02 1062 aa22.38■■□□□ 1.17
FN1-208ENST00000426059 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
FN1-208ENST00000426059 CRB1P82279 1406 aa22.37■■□□□ 1.17
FN1-208ENST00000426059 TCERG1O14776 1098 aaKnown RBP22.37■■□□□ 1.17
FN1-208ENST00000426059 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
FN1-208ENST00000426059 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
FN1-208ENST00000426059 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
FN1-208ENST00000426059 CHL1O00533 1208 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 VAMP4O75379 141 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 MYT1Q01538 1121 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 IL17REQ8NFR9 667 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 PRDM11Q9NQV5 511 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
FN1-208ENST00000426059 RLBP1P12271 317 aa22.34■■□□□ 1.17
FN1-208ENST00000426059 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
FN1-208ENST00000426059 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
FN1-208ENST00000426059 CPDO75976 1380 aa22.33■■□□□ 1.17
FN1-208ENST00000426059 NCAPD2Q15021 1401 aa22.33■■□□□ 1.16
FN1-208ENST00000426059 ZNF530Q6P9A1 599 aaPredicted RBP22.32■■□□□ 1.16
FN1-208ENST00000426059 LGR6Q9HBX8 967 aa22.32■■□□□ 1.16
FN1-208ENST00000426059 CAMTA1Q9Y6Y1 1673 aa22.32■■□□□ 1.16
FN1-208ENST00000426059 ABCA3Q99758 1704 aa22.32■■□□□ 1.16
FN1-208ENST00000426059 PDE3AQ14432 1141 aa22.31■■□□□ 1.16
FN1-208ENST00000426059 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
FN1-208ENST00000426059 NOB1Q9ULX3 412 aaKnown RBP22.31■■□□□ 1.16
FN1-208ENST00000426059 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
FN1-208ENST00000426059 PLEKHO1Q53GL0 409 aaPredicted RBP22.31■■□□□ 1.16
FN1-208ENST00000426059 PIP4K2BP78356 416 aa22.29■■□□□ 1.16
FN1-208ENST00000426059 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
FN1-208ENST00000426059 MPRIPQ6WCQ1 1025 aa22.29■■□□□ 1.16
FN1-208ENST00000426059 LMO7Q8WWI1 1683 aa22.29■■□□□ 1.16
FN1-208ENST00000426059 TRIM27P14373 513 aa22.27■■□□□ 1.16
FN1-208ENST00000426059 ALDH1L2Q3SY69 923 aa22.27■■□□□ 1.16
FN1-208ENST00000426059 FAM208AQ9UK61 1670 aaKnown RBP22.27■■□□□ 1.16
FN1-208ENST00000426059 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
FN1-208ENST00000426059 AMOTQ4VCS5 1084 aa22.27■■□□□ 1.16
FN1-208ENST00000426059 RAPGEF4Q8WZA2 1011 aa22.27■■□□□ 1.16
FN1-208ENST00000426059 AKAP4Q5JQC9 854 aa22.26■■□□□ 1.15
FN1-208ENST00000426059 MEGF6O75095 1541 aa22.25■■□□□ 1.15
FN1-208ENST00000426059 C1orf141Q5JVX7 400 aa22.25■■□□□ 1.15
FN1-208ENST00000426059 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
FN1-208ENST00000426059 MRPL50Q8N5N7 158 aaKnown RBP22.25■■□□□ 1.15
FN1-208ENST00000426059 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
FN1-208ENST00000426059 ATF7IPQ6VMQ6 1270 aa22.24■■□□□ 1.15
FN1-208ENST00000426059 DZIP1LQ8IYY4 767 aaKnown RBP22.24■■□□□ 1.15
FN1-208ENST00000426059 TAF7Q15545 349 aaPredicted RBP22.24■■□□□ 1.15
FN1-208ENST00000426059 TOM1L2Q6ZVM7 507 aa22.24■■□□□ 1.15
FN1-208ENST00000426059 ABCC6O95255 1503 aa22.23■■□□□ 1.15
FN1-208ENST00000426059 ZNF428Q96B54 188 aa22.23■■□□□ 1.15
FN1-208ENST00000426059 CEMIPQ8WUJ3 1361 aa22.23■■□□□ 1.15
FN1-208ENST00000426059 TATP17735 454 aaPredicted RBP22.23■■□□□ 1.15
FN1-208ENST00000426059 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
FN1-208ENST00000426059 AHDC1Q5TGY3 1603 aaPredicted RBP22.22■■□□□ 1.15
FN1-208ENST00000426059 VIRMAQ69YN4 1812 aaKnown RBP22.22■■□□□ 1.15
FN1-208ENST00000426059 COL5A2P05997 1499 aaPredicted RBP22.21■■□□□ 1.15
FN1-208ENST00000426059 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
FN1-208ENST00000426059 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.15
FN1-208ENST00000426059 LARP1Q6PKG0 1096 aaKnown RBP22.2■■□□□ 1.15
FN1-208ENST00000426059 EVA1CP58658 441 aa22.19■■□□□ 1.14
FN1-208ENST00000426059 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
FN1-208ENST00000426059 TOM1O60784 492 aa22.19■■□□□ 1.14
FN1-208ENST00000426059 TEFQ10587 303 aa22.19■■□□□ 1.14
FN1-208ENST00000426059 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
FN1-208ENST00000426059 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
FN1-208ENST00000426059 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
FN1-208ENST00000426059 KCNQ3O43525 872 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 TMEM57Q8N5G2 664 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 NECTIN2Q92692 538 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 PHLPP1O60346 1717 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 BRPF1P55201 1214 aaPredicted RBP22.18■■□□□ 1.14
FN1-208ENST00000426059 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 BTG4Q9NY30 223 aa22.18■■□□□ 1.14
FN1-208ENST00000426059 SKAP1Q86WV1 359 aa22.17■■□□□ 1.14
FN1-208ENST00000426059 UBAP1LF5GYI3 381 aa22.17■■□□□ 1.14
FN1-208ENST00000426059 SPG7Q9UQ90 795 aa22.16■■□□□ 1.14
FN1-208ENST00000426059 BTBD11A6QL63 1104 aa22.15■■□□□ 1.14
FN1-208ENST00000426059 PHKG2P15735 406 aa22.15■■□□□ 1.14
FN1-208ENST00000426059 CYP27B1O15528 508 aa22.14■■□□□ 1.14
FN1-208ENST00000426059 MS4A1P11836 297 aa22.14■■□□□ 1.13
FN1-208ENST00000426059 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
FN1-208ENST00000426059 ADAMTS2O95450 1211 aa22.13■■□□□ 1.13
FN1-208ENST00000426059 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
FN1-208ENST00000426059 IGHDP01880 384 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 TSHZ2Q9NRE2 1034 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 PCDHB15Q9Y5E8 787 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 KDM2BQ8NHM5 1336 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 IFNL2Q8IZJ0 200 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
FN1-208ENST00000426059 KDM6AO15550 1401 aaPredicted RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 NUTM2BA6NNL0 878 aaPredicted RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 NUTM2EB1AL46 878 aaPredicted RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 NUTM2AQ8IVF1 878 aaPredicted RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms