RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 CGNL1Q0VF96 1302 aa29.21■■■□□ 2.27
SMIM12-202ENST00000423898 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
SMIM12-202ENST00000423898 STK32BQ9NY57 414 aa29.21■■■□□ 2.27
SMIM12-202ENST00000423898 EMILIN1Q9Y6C2 1016 aa29.21■■■□□ 2.27
SMIM12-202ENST00000423898 KIF24Q5T7B8 1368 aa29.21■■■□□ 2.27
SMIM12-202ENST00000423898 MAP2P11137 1827 aaKnown RBP29.18■■■□□ 2.26
SMIM12-202ENST00000423898 PPM1GO15355 546 aaPredicted RBP29.18■■■□□ 2.26
SMIM12-202ENST00000423898 RAPGEF4Q8WZA2 1011 aa29.18■■■□□ 2.26
SMIM12-202ENST00000423898 SYTL4Q96C24 671 aaPredicted RBP29.18■■■□□ 2.26
SMIM12-202ENST00000423898 PPP1R1BQ9UD71 204 aaPredicted RBP29.18■■■□□ 2.26
SMIM12-202ENST00000423898 ANKRD26Q9UPS8 1709 aa29.17■■■□□ 2.26
SMIM12-202ENST00000423898 PDGFDQ9GZP0 370 aaPredicted RBP29.17■■■□□ 2.26
SMIM12-202ENST00000423898 SLC15A2Q16348 729 aa29.16■■■□□ 2.26
SMIM12-202ENST00000423898 PAPPAQ13219 1627 aa29.15■■■□□ 2.26
SMIM12-202ENST00000423898 TATP17735 454 aaPredicted RBP29.14■■■□□ 2.26
SMIM12-202ENST00000423898 PRIM1P49642 420 aaKnown RBP29.13■■■□□ 2.25
SMIM12-202ENST00000423898 ZBTB7AO95365 584 aa29.12■■■□□ 2.25
SMIM12-202ENST00000423898 TNNT2P45379 298 aaPredicted RBP29.09■■■□□ 2.25
SMIM12-202ENST00000423898 LRRC4BQ9NT99 713 aa29.09■■■□□ 2.25
SMIM12-202ENST00000423898 PANK3Q9H999 370 aa29.08■■■□□ 2.25
SMIM12-202ENST00000423898 NSD2O96028 1365 aa29.08■■■□□ 2.25
SMIM12-202ENST00000423898 PCDH11XQ9BZA7 1347 aa29.07■■■□□ 2.24
SMIM12-202ENST00000423898 PCDH11YQ9BZA8 1340 aa29.07■■■□□ 2.24
SMIM12-202ENST00000423898 ATF5Q9Y2D1 282 aaPredicted RBP29.07■■■□□ 2.24
SMIM12-202ENST00000423898 LY75O60449 1722 aa29.06■■■□□ 2.24
SMIM12-202ENST00000423898 WASHC2AQ641Q2 1341 aa29.06■■■□□ 2.24
SMIM12-202ENST00000423898 ZNF827Q17R98 1081 aa29.05■■■□□ 2.24
SMIM12-202ENST00000423898 SLC27A3Q5K4L6 730 aa29.05■■■□□ 2.24
SMIM12-202ENST00000423898 POLKQ9UBT6 870 aa29.05■■■□□ 2.24
SMIM12-202ENST00000423898 PKD1L3Q7Z443 1732 aa29.05■■■□□ 2.24
SMIM12-202ENST00000423898 NCAPD2Q15021 1401 aa29.03■■■□□ 2.24
SMIM12-202ENST00000423898 KCNQ4P56696 695 aa29.02■■■□□ 2.24
SMIM12-202ENST00000423898 PTGER2P43116 358 aa29■■■□□ 2.23
SMIM12-202ENST00000423898 EYA1Q99502 592 aa29■■■□□ 2.23
SMIM12-202ENST00000423898 MTFR1LQ9H019 292 aa29■■■□□ 2.23
SMIM12-202ENST00000423898 CYP27B1O15528 508 aa28.99■■■□□ 2.23
SMIM12-202ENST00000423898 QSER1Q2KHR3 1735 aa28.99■■■□□ 2.23
SMIM12-202ENST00000423898 TOGARAM1Q9Y4F4 1720 aa28.99■■■□□ 2.23
SMIM12-202ENST00000423898 TUBGCP6Q96RT7 1819 aa28.99■■■□□ 2.23
SMIM12-202ENST00000423898 AKT1S1Q96B36 256 aa28.98■■■□□ 2.23
SMIM12-202ENST00000423898 ITGB4P16144 1822 aa28.97■■■□□ 2.23
SMIM12-202ENST00000423898 CCNL1Q9UK58 526 aaPredicted RBP28.97■■■□□ 2.23
SMIM12-202ENST00000423898 EIF4A2Q14240 407 aaKnown RBP28.96■■■□□ 2.23
SMIM12-202ENST00000423898 SPG7Q9UQ90 795 aa28.95■■■□□ 2.22
SMIM12-202ENST00000423898 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
SMIM12-202ENST00000423898 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
SMIM12-202ENST00000423898 KNSTRNQ9Y448 316 aa28.93■■■□□ 2.22
SMIM12-202ENST00000423898 MORC1Q86VD1 984 aa28.92■■■□□ 2.22
SMIM12-202ENST00000423898 C5P01031 1676 aa28.91■■■□□ 2.22
SMIM12-202ENST00000423898 KIF7Q2M1P5 1343 aa28.91■■■□□ 2.22
SMIM12-202ENST00000423898 PNPLA7Q6ZV29 1317 aa28.91■■■□□ 2.22
SMIM12-202ENST00000423898 DCAF8L1A6NGE4 600 aa28.9■■■□□ 2.22
SMIM12-202ENST00000423898 SGIP1Q9BQI5 828 aa28.9■■■□□ 2.22
SMIM12-202ENST00000423898 PALLDQ8WX93 1383 aa28.89■■■□□ 2.22
SMIM12-202ENST00000423898 FHDC1Q9C0D6 1143 aaPredicted RBP28.88■■■□□ 2.21
SMIM12-202ENST00000423898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.87■■■□□ 2.21
SMIM12-202ENST00000423898 TAF1LQ8IZX4 1826 aa28.87■■■□□ 2.21
SMIM12-202ENST00000423898 NKX1-1Q15270 411 aaPredicted RBP28.86■■■□□ 2.21
SMIM12-202ENST00000423898 IGSF1Q8N6C5 1336 aa28.86■■■□□ 2.21
SMIM12-202ENST00000423898 SLC16A10Q8TF71 515 aa28.85■■■□□ 2.21
SMIM12-202ENST00000423898 ARXQ96QS3 562 aa28.85■■■□□ 2.21
SMIM12-202ENST00000423898 IFNL2Q8IZJ0 200 aa28.84■■■□□ 2.21
SMIM12-202ENST00000423898 PHKG2P15735 406 aa28.83■■■□□ 2.21
SMIM12-202ENST00000423898 PIGBQ92521 554 aa28.83■■■□□ 2.21
SMIM12-202ENST00000423898 SMARCC1Q92922 1105 aaPredicted RBP28.83■■■□□ 2.21
SMIM12-202ENST00000423898 SYT17Q9BSW7 474 aa28.83■■■□□ 2.21
SMIM12-202ENST00000423898 MSH5O43196 834 aa28.82■■■□□ 2.2
SMIM12-202ENST00000423898 COL24A1Q17RW2 1714 aa28.81■■■□□ 2.2
SMIM12-202ENST00000423898 POLD1P28340 1107 aa28.8■■■□□ 2.2
SMIM12-202ENST00000423898 AMER1Q5JTC6 1135 aaPredicted RBP28.8■■■□□ 2.2
SMIM12-202ENST00000423898 TMOD3Q9NYL9 352 aa28.8■■■□□ 2.2
SMIM12-202ENST00000423898 PLEKHG2Q9H7P9 1386 aa28.79■■■□□ 2.2
SMIM12-202ENST00000423898 C4BP0C0L5 1744 aa28.78■■■□□ 2.2
SMIM12-202ENST00000423898 YY1P25490 414 aa28.77■■■□□ 2.2
SMIM12-202ENST00000423898 HMGB2P26583 209 aaKnown RBP28.77■■■□□ 2.2
SMIM12-202ENST00000423898 COL23A1Q86Y22 540 aaPredicted RBP28.77■■■□□ 2.2
SMIM12-202ENST00000423898 KLHL34Q8N239 644 aa28.76■■■□□ 2.19
SMIM12-202ENST00000423898 PLEKHO1Q53GL0 409 aaPredicted RBP28.75■■■□□ 2.19
SMIM12-202ENST00000423898 AEBP1Q8IUX7 1158 aa28.75■■■□□ 2.19
SMIM12-202ENST00000423898 MAP3K5Q99683 1374 aa28.74■■■□□ 2.19
SMIM12-202ENST00000423898 ZNF530Q6P9A1 599 aaPredicted RBP28.73■■■□□ 2.19
SMIM12-202ENST00000423898 AK7Q96M32 723 aa28.73■■■□□ 2.19
SMIM12-202ENST00000423898 ASAP1Q9ULH1 1129 aa28.73■■■□□ 2.19
SMIM12-202ENST00000423898 UTRNP46939 3433 aa28.72■■■□□ 2.19
SMIM12-202ENST00000423898 LOC102724428A0A0B4J2F2 783 aa28.72■■■□□ 2.19
SMIM12-202ENST00000423898 SIK1P57059 783 aa28.72■■■□□ 2.19
SMIM12-202ENST00000423898 CC2D1BQ5T0F9 858 aaKnown RBP28.72■■■□□ 2.19
SMIM12-202ENST00000423898 AMOTQ4VCS5 1084 aa28.71■■■□□ 2.19
SMIM12-202ENST00000423898 MSL1Q68DK7 614 aa28.71■■■□□ 2.19
SMIM12-202ENST00000423898 SULT6B1Q6IMI4 303 aa28.71■■■□□ 2.19
SMIM12-202ENST00000423898 UBR3Q6ZT12 1888 aa28.71■■■□□ 2.19
SMIM12-202ENST00000423898 HSP90AB1P08238 724 aaKnown RBP28.7■■■□□ 2.18
SMIM12-202ENST00000423898 IL13P35225 146 aa28.7■■■□□ 2.18
SMIM12-202ENST00000423898 PER1O15534 1290 aaPredicted RBP28.69■■■□□ 2.18
SMIM12-202ENST00000423898 FLAD1Q8NFF5 587 aa28.69■■■□□ 2.18
SMIM12-202ENST00000423898 DCAF5Q96JK2 942 aa28.69■■■□□ 2.18
SMIM12-202ENST00000423898 MTHFSP49914 203 aa28.68■■■□□ 2.18
SMIM12-202ENST00000423898 ERVV-2B6SEH9 535 aa28.67■■■□□ 2.18
SMIM12-202ENST00000423898 PHF14O94880 888 aa28.67■■■□□ 2.18
SMIM12-202ENST00000423898 CNGB1Q14028 1251 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms