RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TMF1P82094 1093 aa26.15■■□□□ 1.78
AC004540.1-203ENST00000421862 FYB1O15117 783 aa26.14■■□□□ 1.78
AC004540.1-203ENST00000421862 SLC27A3Q5K4L6 730 aa26.14■■□□□ 1.78
AC004540.1-203ENST00000421862 C5P01031 1676 aa26.14■■□□□ 1.78
AC004540.1-203ENST00000421862 TAF1LQ8IZX4 1826 aa26.14■■□□□ 1.77
AC004540.1-203ENST00000421862 TOGARAM1Q9Y4F4 1720 aa26.14■■□□□ 1.77
AC004540.1-203ENST00000421862 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
AC004540.1-203ENST00000421862 KIF24Q5T7B8 1368 aa26.13■■□□□ 1.77
AC004540.1-203ENST00000421862 DCAF8L1A6NGE4 600 aa26.13■■□□□ 1.77
AC004540.1-203ENST00000421862 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
AC004540.1-203ENST00000421862 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
AC004540.1-203ENST00000421862 FHDC1Q9C0D6 1143 aaPredicted RBP26.12■■□□□ 1.77
AC004540.1-203ENST00000421862 RRS1Q15050 365 aaKnown RBP26.11■■□□□ 1.77
AC004540.1-203ENST00000421862 ITGB4P16144 1822 aa26.11■■□□□ 1.77
AC004540.1-203ENST00000421862 INSRP06213 1382 aa26.1■■□□□ 1.77
AC004540.1-203ENST00000421862 TRIM26Q12899 539 aaPredicted RBP26.1■■□□□ 1.77
AC004540.1-203ENST00000421862 SYT17Q9BSW7 474 aa26.1■■□□□ 1.77
AC004540.1-203ENST00000421862 GGNBP2Q9H3C7 697 aa26.1■■□□□ 1.77
AC004540.1-203ENST00000421862 CGNL1Q0VF96 1302 aa26.1■■□□□ 1.77
AC004540.1-203ENST00000421862 FLT4P35916 1363 aa26.09■■□□□ 1.77
AC004540.1-203ENST00000421862 NCAPD2Q15021 1401 aa26.09■■□□□ 1.77
AC004540.1-203ENST00000421862 ZCRB1Q8TBF4 217 aaKnown RBP26.09■■□□□ 1.77
AC004540.1-203ENST00000421862 NBPF6Q5VWK0 638 aa26.08■■□□□ 1.77
AC004540.1-203ENST00000421862 NBPF4Q96M43 638 aa26.08■■□□□ 1.77
AC004540.1-203ENST00000421862 MAP2P11137 1827 aaKnown RBP26.07■■□□□ 1.76
AC004540.1-203ENST00000421862 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
AC004540.1-203ENST00000421862 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
AC004540.1-203ENST00000421862 CDCA8Q53HL2 280 aa26.06■■□□□ 1.76
AC004540.1-203ENST00000421862 ARXQ96QS3 562 aa26.06■■□□□ 1.76
AC004540.1-203ENST00000421862 SLC16A10Q8TF71 515 aa26.05■■□□□ 1.76
AC004540.1-203ENST00000421862 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
AC004540.1-203ENST00000421862 SYTL4Q96C24 671 aaPredicted RBP26.03■■□□□ 1.76
AC004540.1-203ENST00000421862 USHBP1Q8N6Y0 703 aa26.02■■□□□ 1.76
AC004540.1-203ENST00000421862 PCDH11XQ9BZA7 1347 aa26■■□□□ 1.75
AC004540.1-203ENST00000421862 PCDH11YQ9BZA8 1340 aa26■■□□□ 1.75
AC004540.1-203ENST00000421862 HSP90AB2PQ58FF8 381 aa26■■□□□ 1.75
AC004540.1-203ENST00000421862 RAPGEF4Q8WZA2 1011 aa26■■□□□ 1.75
AC004540.1-203ENST00000421862 CARD14Q9BXL6 1004 aa26■■□□□ 1.75
AC004540.1-203ENST00000421862 KCNQ4P56696 695 aa25.98■■□□□ 1.75
AC004540.1-203ENST00000421862 TIMELESSQ9UNS1 1208 aa25.98■■□□□ 1.75
AC004540.1-203ENST00000421862 UBR3Q6ZT12 1888 aa25.98■■□□□ 1.75
AC004540.1-203ENST00000421862 C4BP0C0L5 1744 aa25.97■■□□□ 1.75
AC004540.1-203ENST00000421862 TATP17735 454 aaPredicted RBP25.97■■□□□ 1.75
AC004540.1-203ENST00000421862 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
AC004540.1-203ENST00000421862 TFCP2L1Q9NZI6 479 aa25.96■■□□□ 1.75
AC004540.1-203ENST00000421862 CLSPNQ9HAW4 1339 aa25.95■■□□□ 1.75
AC004540.1-203ENST00000421862 EMILIN1Q9Y6C2 1016 aa25.94■■□□□ 1.74
AC004540.1-203ENST00000421862 GOLGB1Q14789 3259 aaKnown RBP25.94■■□□□ 1.74
AC004540.1-203ENST00000421862 POLD1P28340 1107 aa25.92■■□□□ 1.74
AC004540.1-203ENST00000421862 CYP27B1O15528 508 aa25.91■■□□□ 1.74
AC004540.1-203ENST00000421862 ZNF784Q8NCA9 323 aaPredicted RBP25.91■■□□□ 1.74
AC004540.1-203ENST00000421862 PALLDQ8WX93 1383 aa25.91■■□□□ 1.74
AC004540.1-203ENST00000421862 PLEKHG2Q9H7P9 1386 aa25.88■■□□□ 1.73
AC004540.1-203ENST00000421862 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
AC004540.1-203ENST00000421862 COL23A1Q86Y22 540 aaPredicted RBP25.87■■□□□ 1.73
AC004540.1-203ENST00000421862 ZNF831Q5JPB2 1677 aa25.86■■□□□ 1.73
AC004540.1-203ENST00000421862 NKX1-1Q15270 411 aaPredicted RBP25.85■■□□□ 1.73
AC004540.1-203ENST00000421862 HMGB2P26583 209 aaKnown RBP25.83■■□□□ 1.73
AC004540.1-203ENST00000421862 NLGN2Q8NFZ4 835 aa25.83■■□□□ 1.73
AC004540.1-203ENST00000421862 MPRIPQ6WCQ1 1025 aa25.82■■□□□ 1.72
AC004540.1-203ENST00000421862 KLHL34Q8N239 644 aa25.81■■□□□ 1.72
AC004540.1-203ENST00000421862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.81■■□□□ 1.72
AC004540.1-203ENST00000421862 POLKQ9UBT6 870 aa25.81■■□□□ 1.72
AC004540.1-203ENST00000421862 COL5A3P25940 1745 aaPredicted RBP25.8■■□□□ 1.72
AC004540.1-203ENST00000421862 GPR162Q16538 588 aa25.8■■□□□ 1.72
AC004540.1-203ENST00000421862 SMARCC1Q92922 1105 aaPredicted RBP25.8■■□□□ 1.72
AC004540.1-203ENST00000421862 EYA1Q99502 592 aa25.8■■□□□ 1.72
AC004540.1-203ENST00000421862 FLAD1Q8NFF5 587 aa25.79■■□□□ 1.72
AC004540.1-203ENST00000421862 SPG7Q9UQ90 795 aa25.79■■□□□ 1.72
AC004540.1-203ENST00000421862 PPM1GO15355 546 aaPredicted RBP25.78■■□□□ 1.72
AC004540.1-203ENST00000421862 PIGBQ92521 554 aa25.78■■□□□ 1.72
AC004540.1-203ENST00000421862 MSH5O43196 834 aa25.76■■□□□ 1.71
AC004540.1-203ENST00000421862 KIF13BQ9NQT8 1826 aa25.75■■□□□ 1.71
AC004540.1-203ENST00000421862 MSL1Q68DK7 614 aa25.75■■□□□ 1.71
AC004540.1-203ENST00000421862 AMIGO3Q86WK7 504 aa25.75■■□□□ 1.71
AC004540.1-203ENST00000421862 KDRP35968 1356 aa25.73■■□□□ 1.71
AC004540.1-203ENST00000421862 IGSF1Q8N6C5 1336 aa25.73■■□□□ 1.71
AC004540.1-203ENST00000421862 PHKG2P15735 406 aa25.73■■□□□ 1.71
AC004540.1-203ENST00000421862 EIF4A2Q14240 407 aaKnown RBP25.73■■□□□ 1.71
AC004540.1-203ENST00000421862 CICQ96RK0 1608 aaPredicted RBP25.73■■□□□ 1.71
AC004540.1-203ENST00000421862 YBX3P16989 372 aaKnown RBP eCLIP25.72■■□□□ 1.71
AC004540.1-203ENST00000421862 AK7Q96M32 723 aa25.72■■□□□ 1.71
AC004540.1-203ENST00000421862 KIAA1551Q9HCM1 1747 aa25.71■■□□□ 1.71
AC004540.1-203ENST00000421862 LOC102724428A0A0B4J2F2 783 aa25.71■■□□□ 1.71
AC004540.1-203ENST00000421862 SIK1P57059 783 aa25.71■■□□□ 1.71
AC004540.1-203ENST00000421862 IFNL2Q8IZJ0 200 aa25.71■■□□□ 1.71
AC004540.1-203ENST00000421862 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
AC004540.1-203ENST00000421862 CD2APQ9Y5K6 639 aa25.7■■□□□ 1.7
AC004540.1-203ENST00000421862 C4AP0C0L4 1744 aa25.7■■□□□ 1.7
AC004540.1-203ENST00000421862 SSFA2P28290 1259 aa25.69■■□□□ 1.7
AC004540.1-203ENST00000421862 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
AC004540.1-203ENST00000421862 LINC00116Q8NCU8 138 aa25.69■■□□□ 1.7
AC004540.1-203ENST00000421862 VIRMAQ69YN4 1812 aaKnown RBP25.68■■□□□ 1.7
AC004540.1-203ENST00000421862 EIF4G2P78344 907 aaKnown RBP eCLIP25.68■■□□□ 1.7
AC004540.1-203ENST00000421862 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
AC004540.1-203ENST00000421862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.67■■□□□ 1.7
AC004540.1-203ENST00000421862 GRIN3BO60391 1043 aa25.67■■□□□ 1.7
AC004540.1-203ENST00000421862 HSPA5P11021 654 aaKnown RBP25.67■■□□□ 1.7
AC004540.1-203ENST00000421862 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
AC004540.1-203ENST00000421862 KDM6AO15550 1401 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms