RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 SBF2Q86WG5 1849 aa26.07■■□□□ 1.76
GCDH-202ENST00000421816 ZCRB1Q8TBF4 217 aaKnown RBP26.06■■□□□ 1.76
GCDH-202ENST00000421816 CFAP53Q96M91 514 aa26.06■■□□□ 1.76
GCDH-202ENST00000421816 KDRP35968 1356 aa26.06■■□□□ 1.76
GCDH-202ENST00000421816 PLEKHG2Q9H7P9 1386 aa26.06■■□□□ 1.76
GCDH-202ENST00000421816 CCDC125Q86Z20 511 aa26.05■■□□□ 1.76
GCDH-202ENST00000421816 TNS1Q9HBL0 1735 aaKnown RBP26.03■■□□□ 1.76
GCDH-202ENST00000421816 SULT6B1Q6IMI4 303 aa26.02■■□□□ 1.76
GCDH-202ENST00000421816 AEBP1Q8IUX7 1158 aa26.02■■□□□ 1.76
GCDH-202ENST00000421816 PRKRIP1Q9H875 184 aaPredicted RBP26.02■■□□□ 1.76
GCDH-202ENST00000421816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.01■■□□□ 1.75
GCDH-202ENST00000421816 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
GCDH-202ENST00000421816 DDX54Q8TDD1 881 aaKnown RBP26■■□□□ 1.75
GCDH-202ENST00000421816 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
GCDH-202ENST00000421816 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
GCDH-202ENST00000421816 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
GCDH-202ENST00000421816 TRIM37O94972 964 aa25.97■■□□□ 1.75
GCDH-202ENST00000421816 NHSQ6T4R5 1651 aa25.96■■□□□ 1.75
GCDH-202ENST00000421816 U2SURPO15042 1029 aaKnown RBP25.95■■□□□ 1.74
GCDH-202ENST00000421816 CYP27B1O15528 508 aa25.95■■□□□ 1.74
GCDH-202ENST00000421816 HMOX1P09601 288 aa25.95■■□□□ 1.74
GCDH-202ENST00000421816 NUDCQ9Y266 331 aa25.95■■□□□ 1.74
GCDH-202ENST00000421816 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
GCDH-202ENST00000421816 SF3B2Q13435 895 aaKnown RBP25.93■■□□□ 1.74
GCDH-202ENST00000421816 AMOTQ4VCS5 1084 aa25.92■■□□□ 1.74
GCDH-202ENST00000421816 PLEKHO1Q53GL0 409 aaPredicted RBP25.92■■□□□ 1.74
GCDH-202ENST00000421816 BCL11BQ9C0K0 894 aaPredicted RBP25.92■■□□□ 1.74
GCDH-202ENST00000421816 NKX1-1Q15270 411 aaPredicted RBP25.9■■□□□ 1.74
GCDH-202ENST00000421816 PTF1AQ7RTS3 328 aa25.9■■□□□ 1.74
GCDH-202ENST00000421816 PHKG2P15735 406 aa25.89■■□□□ 1.74
GCDH-202ENST00000421816 IFNL2Q8IZJ0 200 aa25.89■■□□□ 1.74
GCDH-202ENST00000421816 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.74
GCDH-202ENST00000421816 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
GCDH-202ENST00000421816 KCNQ2O43526 872 aa25.88■■□□□ 1.73
GCDH-202ENST00000421816 BAG6P46379 1132 aa25.88■■□□□ 1.73
GCDH-202ENST00000421816 U2AF1L5P0DN76 240 aaPredicted RBP25.87■■□□□ 1.73
GCDH-202ENST00000421816 U2AF1Q01081 240 aaKnown RBP eCLIP25.87■■□□□ 1.73
GCDH-202ENST00000421816 DEFB132Q7Z7B7 95 aa25.87■■□□□ 1.73
GCDH-202ENST00000421816 RSPH6AQ9H0K4 717 aa25.87■■□□□ 1.73
GCDH-202ENST00000421816 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
GCDH-202ENST00000421816 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
GCDH-202ENST00000421816 BTAF1O14981 1849 aa25.86■■□□□ 1.73
GCDH-202ENST00000421816 APBA3O96018 575 aa25.86■■□□□ 1.73
GCDH-202ENST00000421816 KAT6BQ8WYB5 2073 aa25.85■■□□□ 1.73
GCDH-202ENST00000421816 ZNF530Q6P9A1 599 aaPredicted RBP25.85■■□□□ 1.73
GCDH-202ENST00000421816 ITGB4P16144 1822 aa25.84■■□□□ 1.73
GCDH-202ENST00000421816 ANP32CO43423 234 aa25.84■■□□□ 1.73
GCDH-202ENST00000421816 FCHSD2O94868 740 aa25.84■■□□□ 1.73
GCDH-202ENST00000421816 PRIM1P49642 420 aaKnown RBP25.83■■□□□ 1.73
GCDH-202ENST00000421816 PRKAR2BP31323 418 aa25.82■■□□□ 1.72
GCDH-202ENST00000421816 EN1Q05925 392 aaPredicted RBP25.82■■□□□ 1.72
GCDH-202ENST00000421816 MTHFSDQ2M296 383 aaKnown RBP25.82■■□□□ 1.72
GCDH-202ENST00000421816 CAMKK2Q96RR4 588 aa25.82■■□□□ 1.72
GCDH-202ENST00000421816 PLSCR1O15162 318 aa25.81■■□□□ 1.72
GCDH-202ENST00000421816 RREB1Q92766 1687 aa25.8■■□□□ 1.72
GCDH-202ENST00000421816 HSP90AB1P08238 724 aaKnown RBP25.8■■□□□ 1.72
GCDH-202ENST00000421816 C1orf141Q5JVX7 400 aa25.8■■□□□ 1.72
GCDH-202ENST00000421816 AKAP4Q5JQC9 854 aa25.79■■□□□ 1.72
GCDH-202ENST00000421816 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
GCDH-202ENST00000421816 PHACTR3Q96KR7 559 aa25.79■■□□□ 1.72
GCDH-202ENST00000421816 SCN11AQ9UI33 1791 aa25.79■■□□□ 1.72
GCDH-202ENST00000421816 KDM6AO15550 1401 aaPredicted RBP25.79■■□□□ 1.72
GCDH-202ENST00000421816 EZH2Q15910 746 aaKnown RBP25.78■■□□□ 1.72
GCDH-202ENST00000421816 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
GCDH-202ENST00000421816 VIRMAQ69YN4 1812 aaKnown RBP25.78■■□□□ 1.72
GCDH-202ENST00000421816 ADAMTS7Q9UKP4 1686 aa25.77■■□□□ 1.72
GCDH-202ENST00000421816 GAS2L2Q8NHY3 880 aa25.76■■□□□ 1.71
GCDH-202ENST00000421816 PLEKHF1Q96S99 279 aa25.75■■□□□ 1.71
GCDH-202ENST00000421816 NUP188Q5SRE5 1749 aa25.74■■□□□ 1.71
GCDH-202ENST00000421816 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
GCDH-202ENST00000421816 MPRIPQ6WCQ1 1025 aa25.74■■□□□ 1.71
GCDH-202ENST00000421816 LY75O60449 1722 aa25.74■■□□□ 1.71
GCDH-202ENST00000421816 CCDC184Q52MB2 194 aa25.73■■□□□ 1.71
GCDH-202ENST00000421816 PIGBQ92521 554 aa25.72■■□□□ 1.71
GCDH-202ENST00000421816 PNNQ9H307 717 aaKnown RBP25.72■■□□□ 1.71
GCDH-202ENST00000421816 MAP3K5Q99683 1374 aa25.71■■□□□ 1.71
GCDH-202ENST00000421816 PROM2Q8N271 834 aa25.71■■□□□ 1.71
GCDH-202ENST00000421816 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.7
GCDH-202ENST00000421816 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
GCDH-202ENST00000421816 MRC1P22897 1456 aa25.69■■□□□ 1.7
GCDH-202ENST00000421816 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
GCDH-202ENST00000421816 LGR6Q9HBX8 967 aa25.69■■□□□ 1.7
GCDH-202ENST00000421816 GNAT3A8MTJ3 354 aa25.68■■□□□ 1.7
GCDH-202ENST00000421816 TXNRD1Q16881 649 aa25.68■■□□□ 1.7
GCDH-202ENST00000421816 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
GCDH-202ENST00000421816 DLG5Q8TDM6 1919 aa25.68■■□□□ 1.7
GCDH-202ENST00000421816 NEFMP07197 916 aa25.67■■□□□ 1.7
GCDH-202ENST00000421816 CABP4P57796 275 aa25.66■■□□□ 1.7
GCDH-202ENST00000421816 MAPK8IP3Q9UPT6 1336 aa25.64■■□□□ 1.7
GCDH-202ENST00000421816 IL17REQ8NFR9 667 aa25.64■■□□□ 1.7
GCDH-202ENST00000421816 SMARCC1Q92922 1105 aaPredicted RBP25.64■■□□□ 1.7
GCDH-202ENST00000421816 SLC52A2Q9HAB3 445 aa25.64■■□□□ 1.7
GCDH-202ENST00000421816 MRS2Q9HD23 443 aa25.64■■□□□ 1.7
GCDH-202ENST00000421816 PALLDQ8WX93 1383 aa25.64■■□□□ 1.69
GCDH-202ENST00000421816 SIPA1L3O60292 1781 aaPredicted RBP25.64■■□□□ 1.69
GCDH-202ENST00000421816 NFATC2IPQ8NCF5 419 aa25.63■■□□□ 1.69
GCDH-202ENST00000421816 CEMIPQ8WUJ3 1361 aa25.63■■□□□ 1.69
GCDH-202ENST00000421816 PAPPAQ13219 1627 aa25.63■■□□□ 1.69
GCDH-202ENST00000421816 HTATSF1O43719 755 aaKnown RBP25.62■■□□□ 1.69
GCDH-202ENST00000421816 NFE2L2Q16236 605 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms