RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 NOLC1Q14978 699 aaKnown RBP eCLIP20.22■□□□□ 0.83
PKP4-204ENST00000421462 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
PKP4-204ENST00000421462 TULP4Q9NRJ4 1543 aa20.21■□□□□ 0.83
PKP4-204ENST00000421462 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
PKP4-204ENST00000421462 EXOC6BQ9Y2D4 811 aa20.21■□□□□ 0.83
PKP4-204ENST00000421462 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
PKP4-204ENST00000421462 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
PKP4-204ENST00000421462 ATP7AQ04656 1500 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 ADCY5O95622 1261 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 CEP85Q6P2H3 762 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 MYRIPQ8NFW9 859 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
PKP4-204ENST00000421462 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
PKP4-204ENST00000421462 SPC24Q8NBT2 197 aa20.19■□□□□ 0.82
PKP4-204ENST00000421462 ZNF710Q8N1W2 664 aa20.19■□□□□ 0.82
PKP4-204ENST00000421462 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
PKP4-204ENST00000421462 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
PKP4-204ENST00000421462 MYO3AQ8NEV4 1616 aa20.18■□□□□ 0.82
PKP4-204ENST00000421462 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
PKP4-204ENST00000421462 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
PKP4-204ENST00000421462 F6X3S4 739 aa20.18■□□□□ 0.82
PKP4-204ENST00000421462 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
PKP4-204ENST00000421462 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
PKP4-204ENST00000421462 BRD1O95696 1058 aa20.17■□□□□ 0.82
PKP4-204ENST00000421462 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
PKP4-204ENST00000421462 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
PKP4-204ENST00000421462 FANCAO15360 1455 aa20.17■□□□□ 0.82
PKP4-204ENST00000421462 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
PKP4-204ENST00000421462 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
PKP4-204ENST00000421462 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
PKP4-204ENST00000421462 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
PKP4-204ENST00000421462 ADGRB1O14514 1584 aa20.16■□□□□ 0.82
PKP4-204ENST00000421462 KIF3AQ9Y496 699 aa20.16■□□□□ 0.82
PKP4-204ENST00000421462 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
PKP4-204ENST00000421462 NRXN1Q9ULB1 1477 aa20.15■□□□□ 0.82
PKP4-204ENST00000421462 FIBPO43427 364 aa20.15■□□□□ 0.82
PKP4-204ENST00000421462 ZSCAN20P17040 1043 aaPredicted RBP20.15■□□□□ 0.82
PKP4-204ENST00000421462 MSH6P52701 1360 aa20.15■□□□□ 0.82
PKP4-204ENST00000421462 MAP4K4O95819 1239 aaPredicted RBP20.14■□□□□ 0.82
PKP4-204ENST00000421462 PDE1AP54750 535 aa20.14■□□□□ 0.82
PKP4-204ENST00000421462 MCM10Q7L590 875 aa20.14■□□□□ 0.82
PKP4-204ENST00000421462 SOX12O15370 315 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
PKP4-204ENST00000421462 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 PHF14O94880 888 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 MCCP23508 829 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 GIMAP6Q6P9H5 292 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 NPATQ14207 1427 aa20.13■□□□□ 0.81
PKP4-204ENST00000421462 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 DMTNQ08495 405 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 NME9Q86XW9 330 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 BCL2L12Q9HB09 334 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 PPRC1Q5VV67 1664 aaKnown RBP20.12■□□□□ 0.81
PKP4-204ENST00000421462 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
PKP4-204ENST00000421462 TCHHQ07283 1943 aa20.11■□□□□ 0.81
PKP4-204ENST00000421462 ZCCHC11Q5TAX3 1644 aaKnown RBP20.11■□□□□ 0.81
PKP4-204ENST00000421462 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
PKP4-204ENST00000421462 GLI2P10070 1586 aa20.11■□□□□ 0.81
PKP4-204ENST00000421462 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 USP32Q8NFA0 1604 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
PKP4-204ENST00000421462 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.813e-7■■■■□ 21.5
PKP4-204ENST00000421462 HMGN5P82970 282 aaKnown RBP20.1■□□□□ 0.81
PKP4-204ENST00000421462 ESYT1Q9BSJ8 1104 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 IDI1Q13907 227 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 AEBP1Q8IUX7 1158 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
PKP4-204ENST00000421462 PDCL2Q8N4E4 241 aa20.09■□□□□ 0.81
PKP4-204ENST00000421462 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
PKP4-204ENST00000421462 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
PKP4-204ENST00000421462 KNDC1Q76NI1 1749 aa20.09■□□□□ 0.81
PKP4-204ENST00000421462 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.81
PKP4-204ENST00000421462 ADGRB3O60242 1522 aa20.08■□□□□ 0.81
PKP4-204ENST00000421462 RTL1A6NKG5 1358 aa20.08■□□□□ 0.81
PKP4-204ENST00000421462 HMMRO75330 724 aa20.08■□□□□ 0.81
PKP4-204ENST00000421462 PYCARDQ9ULZ3 195 aa20.08■□□□□ 0.8
PKP4-204ENST00000421462 G2E3Q7L622 706 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 ATP10DQ9P241 1426 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 MROH1Q8NDA8 1641 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 RPGRIP1LQ68CZ1 1315 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 RIOK3O14730 519 aaKnown RBP20.07■□□□□ 0.8
PKP4-204ENST00000421462 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 PUS7Q96PZ0 661 aaKnown RBP20.07■□□□□ 0.8
PKP4-204ENST00000421462 IL1RAPL2Q9NP60 686 aa20.07■□□□□ 0.8
PKP4-204ENST00000421462 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
PKP4-204ENST00000421462 IL13P35225 146 aa20.06■□□□□ 0.8
PKP4-204ENST00000421462 CCDC183Q5T5S1 534 aa20.06■□□□□ 0.8
PKP4-204ENST00000421462 PNPLA6Q8IY17 1366 aa20.06■□□□□ 0.8
PKP4-204ENST00000421462 WDR33Q9C0J8 1336 aaKnown RBP20.06■□□□□ 0.8
PKP4-204ENST00000421462 CPA1P15085 419 aa20.06■□□□□ 0.8
PKP4-204ENST00000421462 LMOD3Q0VAK6 560 aa20.06■□□□□ 0.8
PKP4-204ENST00000421462 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms