RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 CFAP53Q96M91 514 aa25.05■■□□□ 1.6
DDR1-233ENST00000421124 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
DDR1-233ENST00000421124 ZCRB1Q8TBF4 217 aaKnown RBP25.03■■□□□ 1.6
DDR1-233ENST00000421124 TNS1Q9HBL0 1735 aaKnown RBP25.01■■□□□ 1.59
DDR1-233ENST00000421124 BCL9O00512 1426 aa25.01■■□□□ 1.59
DDR1-233ENST00000421124 KDRP35968 1356 aa24.99■■□□□ 1.59
DDR1-233ENST00000421124 DDX54Q8TDD1 881 aaKnown RBP24.99■■□□□ 1.59
DDR1-233ENST00000421124 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
DDR1-233ENST00000421124 KAT6BQ8WYB5 2073 aa24.98■■□□□ 1.59
DDR1-233ENST00000421124 SULT6B1Q6IMI4 303 aa24.98■■□□□ 1.59
DDR1-233ENST00000421124 SF3B2Q13435 895 aaKnown RBP24.97■■□□□ 1.59
DDR1-233ENST00000421124 AEBP1Q8IUX7 1158 aa24.97■■□□□ 1.59
DDR1-233ENST00000421124 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
DDR1-233ENST00000421124 PCDH11XQ9BZA7 1347 aa24.96■■□□□ 1.59
DDR1-233ENST00000421124 PCDH11YQ9BZA8 1340 aa24.96■■□□□ 1.59
DDR1-233ENST00000421124 TRIM37O94972 964 aa24.96■■□□□ 1.59
DDR1-233ENST00000421124 PRKRIP1Q9H875 184 aaPredicted RBP24.96■■□□□ 1.59
DDR1-233ENST00000421124 SPG7Q9UQ90 795 aa24.96■■□□□ 1.59
DDR1-233ENST00000421124 NHSQ6T4R5 1651 aa24.95■■□□□ 1.58
DDR1-233ENST00000421124 U2SURPO15042 1029 aaKnown RBP24.95■■□□□ 1.58
DDR1-233ENST00000421124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.95■■□□□ 1.58
DDR1-233ENST00000421124 DOT1LQ8TEK3 1739 aa24.95■■□□□ 1.58
DDR1-233ENST00000421124 NUDCQ9Y266 331 aa24.94■■□□□ 1.58
DDR1-233ENST00000421124 HMOX1P09601 288 aa24.93■■□□□ 1.58
DDR1-233ENST00000421124 CYP27B1O15528 508 aa24.91■■□□□ 1.58
DDR1-233ENST00000421124 PLEKHO1Q53GL0 409 aaPredicted RBP24.9■■□□□ 1.58
DDR1-233ENST00000421124 BAG6P46379 1132 aa24.89■■□□□ 1.58
DDR1-233ENST00000421124 AMOTQ4VCS5 1084 aa24.89■■□□□ 1.58
DDR1-233ENST00000421124 ACSBG1Q96GR2 724 aa24.89■■□□□ 1.58
DDR1-233ENST00000421124 BCL11BQ9C0K0 894 aaPredicted RBP24.89■■□□□ 1.58
DDR1-233ENST00000421124 BTAF1O14981 1849 aa24.88■■□□□ 1.57
DDR1-233ENST00000421124 IFNL2Q8IZJ0 200 aa24.87■■□□□ 1.57
DDR1-233ENST00000421124 TOGARAM1Q9Y4F4 1720 aa24.86■■□□□ 1.57
DDR1-233ENST00000421124 KCNQ2O43526 872 aa24.86■■□□□ 1.57
DDR1-233ENST00000421124 APBA3O96018 575 aa24.86■■□□□ 1.57
DDR1-233ENST00000421124 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
DDR1-233ENST00000421124 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
DDR1-233ENST00000421124 DEFB132Q7Z7B7 95 aa24.86■■□□□ 1.57
DDR1-233ENST00000421124 RGPD3A6NKT7 1758 aaPredicted RBP24.85■■□□□ 1.57
DDR1-233ENST00000421124 RGPD4Q7Z3J3 1758 aa24.85■■□□□ 1.57
DDR1-233ENST00000421124 ITGB4P16144 1822 aa24.85■■□□□ 1.57
DDR1-233ENST00000421124 PHKG2P15735 406 aa24.85■■□□□ 1.57
DDR1-233ENST00000421124 ZNF530Q6P9A1 599 aaPredicted RBP24.85■■□□□ 1.57
DDR1-233ENST00000421124 PTF1AQ7RTS3 328 aa24.85■■□□□ 1.57
DDR1-233ENST00000421124 NKX1-1Q15270 411 aaPredicted RBP24.84■■□□□ 1.57
DDR1-233ENST00000421124 ANP32CO43423 234 aa24.83■■□□□ 1.57
DDR1-233ENST00000421124 RSPH6AQ9H0K4 717 aa24.83■■□□□ 1.57
DDR1-233ENST00000421124 VIRMAQ69YN4 1812 aaKnown RBP24.82■■□□□ 1.56
DDR1-233ENST00000421124 PRIM1P49642 420 aaKnown RBP24.81■■□□□ 1.56
DDR1-233ENST00000421124 EN1Q05925 392 aaPredicted RBP24.81■■□□□ 1.56
DDR1-233ENST00000421124 C1orf141Q5JVX7 400 aa24.81■■□□□ 1.56
DDR1-233ENST00000421124 SYTL4Q96C24 671 aaPredicted RBP24.81■■□□□ 1.56
DDR1-233ENST00000421124 FCHSD2O94868 740 aa24.8■■□□□ 1.56
DDR1-233ENST00000421124 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
DDR1-233ENST00000421124 PRKAR2BP31323 418 aa24.8■■□□□ 1.56
DDR1-233ENST00000421124 RREB1Q92766 1687 aa24.8■■□□□ 1.56
DDR1-233ENST00000421124 SCN11AQ9UI33 1791 aa24.79■■□□□ 1.56
DDR1-233ENST00000421124 PLSCR1O15162 318 aa24.78■■□□□ 1.56
DDR1-233ENST00000421124 CAMKK2Q96RR4 588 aa24.78■■□□□ 1.56
DDR1-233ENST00000421124 EZH2Q15910 746 aaKnown RBP24.77■■□□□ 1.56
DDR1-233ENST00000421124 MTHFSDQ2M296 383 aaKnown RBP24.77■■□□□ 1.56
DDR1-233ENST00000421124 AKAP4Q5JQC9 854 aa24.77■■□□□ 1.56
DDR1-233ENST00000421124 DCAF5Q96JK2 942 aa24.76■■□□□ 1.55
DDR1-233ENST00000421124 KDM6AO15550 1401 aaPredicted RBP24.75■■□□□ 1.55
DDR1-233ENST00000421124 NUP188Q5SRE5 1749 aa24.75■■□□□ 1.55
DDR1-233ENST00000421124 GAS2L2Q8NHY3 880 aa24.74■■□□□ 1.55
DDR1-233ENST00000421124 PHACTR3Q96KR7 559 aa24.74■■□□□ 1.55
DDR1-233ENST00000421124 MPRIPQ6WCQ1 1025 aa24.73■■□□□ 1.55
DDR1-233ENST00000421124 LY75O60449 1722 aa24.72■■□□□ 1.55
DDR1-233ENST00000421124 ADAMTS7Q9UKP4 1686 aa24.72■■□□□ 1.55
DDR1-233ENST00000421124 PNNQ9H307 717 aaKnown RBP24.72■■□□□ 1.55
DDR1-233ENST00000421124 ERVV-2B6SEH9 535 aa24.71■■□□□ 1.55
DDR1-233ENST00000421124 NEFMP07197 916 aa24.71■■□□□ 1.55
DDR1-233ENST00000421124 WDR43Q15061 677 aaKnown RBP eCLIP24.71■■□□□ 1.55
DDR1-233ENST00000421124 MAP3K5Q99683 1374 aa24.7■■□□□ 1.55
DDR1-233ENST00000421124 TMOD3Q9NYL9 352 aa24.7■■□□□ 1.54
DDR1-233ENST00000421124 DLG5Q8TDM6 1919 aa24.7■■□□□ 1.54
DDR1-233ENST00000421124 PIGBQ92521 554 aa24.69■■□□□ 1.54
DDR1-233ENST00000421124 PLEKHF1Q96S99 279 aa24.69■■□□□ 1.54
DDR1-233ENST00000421124 GNAT3A8MTJ3 354 aa24.67■■□□□ 1.54
DDR1-233ENST00000421124 CABP4P57796 275 aa24.67■■□□□ 1.54
DDR1-233ENST00000421124 TXNRD1Q16881 649 aa24.67■■□□□ 1.54
DDR1-233ENST00000421124 MAPK8IP3Q9UPT6 1336 aa24.66■■□□□ 1.54
DDR1-233ENST00000421124 MRC1P22897 1456 aa24.66■■□□□ 1.54
DDR1-233ENST00000421124 RNMTO43148 476 aaKnown RBP24.66■■□□□ 1.54
DDR1-233ENST00000421124 CCDC184Q52MB2 194 aa24.66■■□□□ 1.54
DDR1-233ENST00000421124 PROM2Q8N271 834 aa24.66■■□□□ 1.54
DDR1-233ENST00000421124 LGR6Q9HBX8 967 aa24.66■■□□□ 1.54
DDR1-233ENST00000421124 SMARCC1Q92922 1105 aaPredicted RBP24.64■■□□□ 1.54
DDR1-233ENST00000421124 ADAMTS8Q9UP79 889 aa24.64■■□□□ 1.54
DDR1-233ENST00000421124 MRS2Q9HD23 443 aa24.63■■□□□ 1.53
DDR1-233ENST00000421124 PALLDQ8WX93 1383 aa24.63■■□□□ 1.53
DDR1-233ENST00000421124 SIPA1L3O60292 1781 aaPredicted RBP24.62■■□□□ 1.53
DDR1-233ENST00000421124 SLC52A2Q9HAB3 445 aa24.62■■□□□ 1.53
DDR1-233ENST00000421124 SLC27A3Q5K4L6 730 aa24.61■■□□□ 1.53
DDR1-233ENST00000421124 NFATC2IPQ8NCF5 419 aa24.61■■□□□ 1.53
DDR1-233ENST00000421124 ASAP1Q9ULH1 1129 aa24.61■■□□□ 1.53
DDR1-233ENST00000421124 NFE2L2Q16236 605 aa24.6■■□□□ 1.53
DDR1-233ENST00000421124 IL17REQ8NFR9 667 aa24.6■■□□□ 1.53
DDR1-233ENST00000421124 PAPPAQ13219 1627 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms