RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
TMEM50B-201ENST00000420455 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
TMEM50B-201ENST00000420455 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 KIAA0232Q92628 1395 aa17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 OVOS2A0A0G2JMS6 1433 aa17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
TMEM50B-201ENST00000420455 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
TMEM50B-201ENST00000420455 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
TMEM50B-201ENST00000420455 PKD1L3Q7Z443 1732 aa17.28■□□□□ 0.36
TMEM50B-201ENST00000420455 VAMP4O75379 141 aa17.28■□□□□ 0.36
TMEM50B-201ENST00000420455 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
TMEM50B-201ENST00000420455 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
TMEM50B-201ENST00000420455 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
TMEM50B-201ENST00000420455 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
TMEM50B-201ENST00000420455 MCM10Q7L590 875 aa17.27■□□□□ 0.35
TMEM50B-201ENST00000420455 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
TMEM50B-201ENST00000420455 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
TMEM50B-201ENST00000420455 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
TMEM50B-201ENST00000420455 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
TMEM50B-201ENST00000420455 CABLES1Q8TDN4 633 aa17.25■□□□□ 0.35
TMEM50B-201ENST00000420455 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
TMEM50B-201ENST00000420455 AAMPQ13685 434 aa17.23■□□□□ 0.35
TMEM50B-201ENST00000420455 IL17REQ8NFR9 667 aa17.23■□□□□ 0.35
TMEM50B-201ENST00000420455 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
TMEM50B-201ENST00000420455 COL16A1Q07092 1604 aaPredicted RBP17.23■□□□□ 0.35
TMEM50B-201ENST00000420455 TSPYL6Q8N831 410 aa17.23■□□□□ 0.35
TMEM50B-201ENST00000420455 C8orf58Q8NAV2 365 aa17.22■□□□□ 0.35
TMEM50B-201ENST00000420455 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
TMEM50B-201ENST00000420455 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
TMEM50B-201ENST00000420455 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
TMEM50B-201ENST00000420455 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
TMEM50B-201ENST00000420455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.354e-6■□□□□ 10.8
TMEM50B-201ENST00000420455 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 MEGF6O75095 1541 aa17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
TMEM50B-201ENST00000420455 MS4A1P11836 297 aa17.19■□□□□ 0.34
TMEM50B-201ENST00000420455 RLBP1P12271 317 aa17.19■□□□□ 0.34
TMEM50B-201ENST00000420455 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
TMEM50B-201ENST00000420455 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
TMEM50B-201ENST00000420455 ATF7IPQ6VMQ6 1270 aa17.18■□□□□ 0.34
TMEM50B-201ENST00000420455 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
TMEM50B-201ENST00000420455 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
TMEM50B-201ENST00000420455 TRIM27P14373 513 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 MRC1P22897 1456 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 TNNQ9UQP3 1299 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 SHANK3Q9BYB0 1731 aa17.17■□□□□ 0.34
TMEM50B-201ENST00000420455 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
TMEM50B-201ENST00000420455 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
TMEM50B-201ENST00000420455 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-201ENST00000420455 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
TMEM50B-201ENST00000420455 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-201ENST00000420455 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
TMEM50B-201ENST00000420455 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
TMEM50B-201ENST00000420455 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.34
TMEM50B-201ENST00000420455 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
TMEM50B-201ENST00000420455 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
TMEM50B-201ENST00000420455 SKAP1Q86WV1 359 aa17.14■□□□□ 0.33
TMEM50B-201ENST00000420455 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
TMEM50B-201ENST00000420455 LGR6Q9HBX8 967 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 RGS12O14924 1447 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 ABCC4O15439 1325 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
TMEM50B-201ENST00000420455 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
TMEM50B-201ENST00000420455 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
TMEM50B-201ENST00000420455 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
TMEM50B-201ENST00000420455 CARD10Q9BWT7 1032 aa17.12■□□□□ 0.33
TMEM50B-201ENST00000420455 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
TMEM50B-201ENST00000420455 WNK3Q9BYP7 1800 aa17.11■□□□□ 0.33
TMEM50B-201ENST00000420455 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
TMEM50B-201ENST00000420455 RAPGEF4Q8WZA2 1011 aa17.11■□□□□ 0.33
TMEM50B-201ENST00000420455 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
TMEM50B-201ENST00000420455 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 PHKG2P15735 406 aa17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 HOXB7P09629 217 aa17.1■□□□□ 0.33
TMEM50B-201ENST00000420455 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
TMEM50B-201ENST00000420455 PTPRCP08575 1304 aa17.08■□□□□ 0.33
TMEM50B-201ENST00000420455 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms