RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 THUMPD2Q9BTF0 503 aaKnown RBP9.62□□□□□ -0.87
VRK2-203ENST00000417641 PTPRMP28827 1452 aa9.62□□□□□ -0.87
VRK2-203ENST00000417641 C8orf58Q8NAV2 365 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 IL17RAQ96F46 866 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 ZSCAN20P17040 1043 aaPredicted RBP9.61□□□□□ -0.87
VRK2-203ENST00000417641 DMTNQ08495 405 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 TWISTNBQ3B726 338 aaPredicted RBP9.61□□□□□ -0.87
VRK2-203ENST00000417641 TSPY26PQ9H489 355 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
VRK2-203ENST00000417641 HECW2Q9P2P5 1572 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 KIAA2012Q0VF49 1180 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 RPAP2Q8IXW5 612 aaPredicted RBP9.6□□□□□ -0.87
VRK2-203ENST00000417641 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 TERF2IPQ9NYB0 399 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 VGFO15240 615 aaPredicted RBP9.6□□□□□ -0.87
VRK2-203ENST00000417641 HMGN5P82970 282 aaKnown RBP9.6□□□□□ -0.87
VRK2-203ENST00000417641 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 RNF214Q8ND24 703 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 PIBF1Q8WXW3 757 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 OSBPL3Q9H4L5 887 aa9.6□□□□□ -0.87
VRK2-203ENST00000417641 ERC2O15083 957 aa9.59□□□□□ -0.87
VRK2-203ENST00000417641 JARID2Q92833 1246 aaPredicted RBP9.59□□□□□ -0.87
VRK2-203ENST00000417641 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
VRK2-203ENST00000417641 ELL2O00472 640 aaPredicted RBP9.59□□□□□ -0.87
VRK2-203ENST00000417641 REC8O95072 547 aa9.59□□□□□ -0.87
VRK2-203ENST00000417641 INTS4Q96HW7 963 aaKnown RBP9.59□□□□□ -0.87
VRK2-203ENST00000417641 SPTLC3Q9NUV7 552 aa9.59□□□□□ -0.87
VRK2-203ENST00000417641 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
VRK2-203ENST00000417641 SIGLEC1Q9BZZ2 1709 aa9.59□□□□□ -0.87
VRK2-203ENST00000417641 IL13P35225 146 aa9.58□□□□□ -0.88
VRK2-203ENST00000417641 MCM2P49736 904 aa9.58□□□□□ -0.88
VRK2-203ENST00000417641 SRPK2P78362 688 aaKnown RBP9.58□□□□□ -0.88
VRK2-203ENST00000417641 ARHGEF40Q8TER5 1519 aa9.58□□□□□ -0.88
VRK2-203ENST00000417641 SMARCA5O60264 1052 aaPredicted RBP9.58□□□□□ -0.88
VRK2-203ENST00000417641 KIF20BQ96Q89 1820 aa9.58□□□□□ -0.88
VRK2-203ENST00000417641 YTHDC2Q9H6S0 1430 aaKnown RBP9.57□□□□□ -0.88
VRK2-203ENST00000417641 SALL3Q9BXA9 1300 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 SAFB2Q14151 953 aaKnown RBP eCLIP9.57□□□□□ -0.88
VRK2-203ENST00000417641 NOLC1Q14978 699 aaKnown RBP eCLIP9.57□□□□□ -0.88
VRK2-203ENST00000417641 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 TMEM87AQ8NBN3 555 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
VRK2-203ENST00000417641 FBLN1P23142 703 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 FKBP5Q13451 457 aaPredicted RBP9.57□□□□□ -0.88
VRK2-203ENST00000417641 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
VRK2-203ENST00000417641 FAM184AQ8NB25 1140 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 TSC1Q92574 1164 aa9.57□□□□□ -0.88
VRK2-203ENST00000417641 RIMS2Q9UQ26 1411 aa9.56□□□□□ -0.88
VRK2-203ENST00000417641 HMOX1P09601 288 aa9.56□□□□□ -0.88
VRK2-203ENST00000417641 NEK4P51957 841 aa9.56□□□□□ -0.88
VRK2-203ENST00000417641 KIAA0232Q92628 1395 aa9.56□□□□□ -0.88
VRK2-203ENST00000417641 PLEKHG5O94827 1062 aa9.56□□□□□ -0.88
VRK2-203ENST00000417641 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
VRK2-203ENST00000417641 HDGFL2Q7Z4V5 671 aaPredicted RBP9.56□□□□□ -0.88
VRK2-203ENST00000417641 FOXD4L4Q8WXT5 416 aaPredicted RBP9.56□□□□□ -0.88
VRK2-203ENST00000417641 SYAP1Q96A49 352 aaPredicted RBP9.56□□□□□ -0.88
VRK2-203ENST00000417641 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 PDE1AP54750 535 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 ANAPC15P60006 121 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 ATP2B3Q16720 1220 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 PALD1Q9ULE6 856 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 MLH3Q9UHC1 1453 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 CDK12Q9NYV4 1490 aaPredicted RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 ZNF830Q96NB3 372 aaPredicted RBP9.55□□□□□ -0.88
VRK2-203ENST00000417641 ESYT1Q9BSJ8 1104 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
VRK2-203ENST00000417641 MSH6P52701 1360 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 KRT24Q2M2I5 525 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 PRAM1Q96QH2 718 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 MEIS3Q99687 375 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 ARID3AQ99856 593 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 STK26Q9P289 416 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 ZHX1Q9UKY1 873 aaPredicted RBP9.54□□□□□ -0.88
VRK2-203ENST00000417641 TUBGCP6Q96RT7 1819 aa9.54□□□□□ -0.88
VRK2-203ENST00000417641 PHF14O94880 888 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 ADCY5O95622 1261 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 TTC12Q9H892 705 aaPredicted RBP9.53□□□□□ -0.88
VRK2-203ENST00000417641 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 POGZQ7Z3K3 1410 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 DLG5Q8TDM6 1919 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 GGT6Q6P531 493 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
VRK2-203ENST00000417641 ANKRD7Q92527 254 aa9.53□□□□□ -0.88
VRK2-203ENST00000417641 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms