RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 PROM2Q8N271 834 aa22.38■■□□□ 1.17
DDR1-231ENST00000417521 PER1O15534 1290 aaPredicted RBP22.37■■□□□ 1.17
DDR1-231ENST00000417521 EYA1Q99502 592 aa22.36■■□□□ 1.17
DDR1-231ENST00000417521 TXNRD1Q16881 649 aa22.35■■□□□ 1.17
DDR1-231ENST00000417521 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
DDR1-231ENST00000417521 NCAPD2Q15021 1401 aa22.34■■□□□ 1.17
DDR1-231ENST00000417521 SBF2Q86WG5 1849 aa22.32■■□□□ 1.16
DDR1-231ENST00000417521 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
DDR1-231ENST00000417521 PCDH11XQ9BZA7 1347 aa22.32■■□□□ 1.16
DDR1-231ENST00000417521 PCDH11YQ9BZA8 1340 aa22.32■■□□□ 1.16
DDR1-231ENST00000417521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.3■■□□□ 1.16
DDR1-231ENST00000417521 RREB1Q92766 1687 aa22.3■■□□□ 1.16
DDR1-231ENST00000417521 SYTL4Q96C24 671 aaPredicted RBP22.29■■□□□ 1.16
DDR1-231ENST00000417521 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
DDR1-231ENST00000417521 CYP27B1O15528 508 aa22.28■■□□□ 1.16
DDR1-231ENST00000417521 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
DDR1-231ENST00000417521 SPG7Q9UQ90 795 aa22.28■■□□□ 1.16
DDR1-231ENST00000417521 NHSQ6T4R5 1651 aa22.28■■□□□ 1.16
DDR1-231ENST00000417521 RGPD3A6NKT7 1758 aaPredicted RBP22.28■■□□□ 1.16
DDR1-231ENST00000417521 RGPD4Q7Z3J3 1758 aa22.28■■□□□ 1.16
DDR1-231ENST00000417521 IGSF1Q8N6C5 1336 aa22.28■■□□□ 1.16
DDR1-231ENST00000417521 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.15
DDR1-231ENST00000417521 NUP188Q5SRE5 1749 aa22.26■■□□□ 1.15
DDR1-231ENST00000417521 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
DDR1-231ENST00000417521 PLEKHG2Q9H7P9 1386 aa22.25■■□□□ 1.15
DDR1-231ENST00000417521 STK32BQ9NY57 414 aa22.25■■□□□ 1.15
DDR1-231ENST00000417521 NKX1-1Q15270 411 aaPredicted RBP22.24■■□□□ 1.15
DDR1-231ENST00000417521 SLC15A2Q16348 729 aa22.24■■□□□ 1.15
DDR1-231ENST00000417521 SLC27A3Q5K4L6 730 aa22.24■■□□□ 1.15
DDR1-231ENST00000417521 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
DDR1-231ENST00000417521 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
DDR1-231ENST00000417521 MTHFSP49914 203 aa22.22■■□□□ 1.15
DDR1-231ENST00000417521 LRRC4BQ9NT99 713 aa22.22■■□□□ 1.15
DDR1-231ENST00000417521 IL13P35225 146 aa22.21■■□□□ 1.15
DDR1-231ENST00000417521 IFNL2Q8IZJ0 200 aa22.21■■□□□ 1.15
DDR1-231ENST00000417521 LRP5O75197 1615 aa22.2■■□□□ 1.14
DDR1-231ENST00000417521 PHKG2P15735 406 aa22.19■■□□□ 1.14
DDR1-231ENST00000417521 SPON1Q9HCB6 807 aa22.19■■□□□ 1.14
DDR1-231ENST00000417521 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
DDR1-231ENST00000417521 MPRIPQ6WCQ1 1025 aa22.18■■□□□ 1.14
DDR1-231ENST00000417521 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
DDR1-231ENST00000417521 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
DDR1-231ENST00000417521 SULT6B1Q6IMI4 303 aa22.16■■□□□ 1.14
DDR1-231ENST00000417521 BTAF1O14981 1849 aa22.16■■□□□ 1.14
DDR1-231ENST00000417521 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
DDR1-231ENST00000417521 KDRP35968 1356 aa22.15■■□□□ 1.14
DDR1-231ENST00000417521 AKT1S1Q96B36 256 aa22.15■■□□□ 1.14
DDR1-231ENST00000417521 PDGFDQ9GZP0 370 aaPredicted RBP22.15■■□□□ 1.14
DDR1-231ENST00000417521 CCNL1Q9UK58 526 aaPredicted RBP22.15■■□□□ 1.14
DDR1-231ENST00000417521 HMGB2P26583 209 aaKnown RBP22.14■■□□□ 1.13
DDR1-231ENST00000417521 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
DDR1-231ENST00000417521 ZNF827Q17R98 1081 aa22.14■■□□□ 1.13
DDR1-231ENST00000417521 PIGBQ92521 554 aa22.14■■□□□ 1.13
DDR1-231ENST00000417521 SMARCC1Q92922 1105 aaPredicted RBP22.14■■□□□ 1.13
DDR1-231ENST00000417521 PKD1L3Q7Z443 1732 aa22.13■■□□□ 1.13
DDR1-231ENST00000417521 DIAPH1O60610 1272 aaKnown RBP22.13■■□□□ 1.13
DDR1-231ENST00000417521 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
DDR1-231ENST00000417521 KCNQ4P56696 695 aa22.12■■□□□ 1.13
DDR1-231ENST00000417521 DOT1LQ8TEK3 1739 aa22.12■■□□□ 1.13
DDR1-231ENST00000417521 ZNF530Q6P9A1 599 aaPredicted RBP22.11■■□□□ 1.13
DDR1-231ENST00000417521 DCAF5Q96JK2 942 aa22.11■■□□□ 1.13
DDR1-231ENST00000417521 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
DDR1-231ENST00000417521 PALLDQ8WX93 1383 aa22.11■■□□□ 1.13
DDR1-231ENST00000417521 KAT6BQ8WYB5 2073 aa22.1■■□□□ 1.13
DDR1-231ENST00000417521 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
DDR1-231ENST00000417521 ERVV-2B6SEH9 535 aa22.09■■□□□ 1.13
DDR1-231ENST00000417521 ZBTB7AO95365 584 aa22.09■■□□□ 1.13
DDR1-231ENST00000417521 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
DDR1-231ENST00000417521 MTFR1LQ9H019 292 aa22.09■■□□□ 1.13
DDR1-231ENST00000417521 TFCP2L1Q9NZI6 479 aa22.09■■□□□ 1.13
DDR1-231ENST00000417521 C1orf141Q5JVX7 400 aa22.08■■□□□ 1.12
DDR1-231ENST00000417521 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.12
DDR1-231ENST00000417521 HMOX1P09601 288 aa22.06■■□□□ 1.12
DDR1-231ENST00000417521 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
DDR1-231ENST00000417521 ATF5Q9Y2D1 282 aaPredicted RBP22.06■■□□□ 1.12
DDR1-231ENST00000417521 PTGER2P43116 358 aa22.05■■□□□ 1.12
DDR1-231ENST00000417521 PNPLA7Q6ZV29 1317 aa22.04■■□□□ 1.12
DDR1-231ENST00000417521 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
DDR1-231ENST00000417521 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 LOC102724428A0A0B4J2F2 783 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 SIK1P57059 783 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 CABP4P57796 275 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 AKAP4Q5JQC9 854 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
DDR1-231ENST00000417521 CASZ1Q86V15 1759 aa22.02■■□□□ 1.12
DDR1-231ENST00000417521 PPP2R1AP30153 589 aa22.02■■□□□ 1.12
DDR1-231ENST00000417521 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
DDR1-231ENST00000417521 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
DDR1-231ENST00000417521 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
DDR1-231ENST00000417521 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
DDR1-231ENST00000417521 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
DDR1-231ENST00000417521 LY75O60449 1722 aa22■■□□□ 1.11
DDR1-231ENST00000417521 KDM6AO15550 1401 aaPredicted RBP22■■□□□ 1.11
DDR1-231ENST00000417521 FLAD1Q8NFF5 587 aa21.99■■□□□ 1.11
DDR1-231ENST00000417521 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
DDR1-231ENST00000417521 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
DDR1-231ENST00000417521 ATP6V1AP38606 617 aa21.97■■□□□ 1.11
DDR1-231ENST00000417521 NFATC2IPQ8NCF5 419 aa21.97■■□□□ 1.11
DDR1-231ENST00000417521 IFFO2Q5TF58 517 aa21.96■■□□□ 1.11
DDR1-231ENST00000417521 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms